RNA–Protein interactions for RNA: ENST00000292729.12

USP41-201, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP41, Length 920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-201ENST00000292729 NSUN6Q8TEA1 469 aaKnown RBP12.24□□□□□ -0.45
USP41-201ENST00000292729 SEPT8Q92599 483 aa12.24□□□□□ -0.45
USP41-201ENST00000292729 ANKS1AQ92625 1134 aa12.24□□□□□ -0.45
USP41-201ENST00000292729 PBXIP1Q96AQ6 731 aa12.24□□□□□ -0.45
USP41-201ENST00000292729 IWS1Q96ST2 819 aa12.24□□□□□ -0.45
USP41-201ENST00000292729 RWDD3Q9Y3V2 267 aa12.24□□□□□ -0.45
USP41-201ENST00000292729 FRMPD2Q68DX3 1309 aaPredicted RBP12.23□□□□□ -0.45
USP41-201ENST00000292729 TMEM221A6NGB7 291 aa12.23□□□□□ -0.45
USP41-201ENST00000292729 C5orf67F2Z3F1 127 aa12.23□□□□□ -0.45
USP41-201ENST00000292729 M0R296 226 aa12.23□□□□□ -0.45
USP41-201ENST00000292729 STXBP3O00186 592 aa12.23□□□□□ -0.45
USP41-201ENST00000292729 ORC4O43929 436 aa12.23□□□□□ -0.45
USP41-201ENST00000292729 TRIM67Q6ZTA4 783 aa12.23□□□□□ -0.45
USP41-201ENST00000292729 SERINC5Q86VE9 423 aa12.23□□□□□ -0.45
USP41-201ENST00000292729 DHX37Q8IY37 1157 aaKnown RBP12.23□□□□□ -0.45
USP41-201ENST00000292729 PPTC7Q8NI37 304 aa12.23□□□□□ -0.45
USP41-201ENST00000292729 WNT8BQ93098 351 aa12.23□□□□□ -0.45
USP41-201ENST00000292729 C11orf84Q9BUA3 381 aaPredicted RBP12.23□□□□□ -0.45
USP41-201ENST00000292729 GPCPD1Q9NPB8 672 aa12.23□□□□□ -0.45
USP41-201ENST00000292729 TCP11L1Q9NUJ3 509 aa12.23□□□□□ -0.45
USP41-201ENST00000292729 DDX41Q9UJV9 622 aaKnown RBP12.23□□□□□ -0.45
USP41-201ENST00000292729 ANAPC4Q9UJX5 808 aa12.23□□□□□ -0.45
USP41-201ENST00000292729 USP34Q70CQ2 3546 aa12.23□□□□□ -0.45
USP41-201ENST00000292729 ZDBF2Q9HCK1 2354 aa12.22□□□□□ -0.45
USP41-201ENST00000292729 GFRA3O60609 400 aa12.22□□□□□ -0.45
USP41-201ENST00000292729 CAND2O75155 1236 aa12.22□□□□□ -0.45
USP41-201ENST00000292729 PPFIA4O75335 1185 aa12.22□□□□□ -0.45
USP41-201ENST00000292729 PDHBP11177 359 aa12.22□□□□□ -0.45
USP41-201ENST00000292729 HOXD8P13378 290 aaPredicted RBP12.22□□□□□ -0.45
USP41-201ENST00000292729 THPOP40225 353 aa12.22□□□□□ -0.45
USP41-201ENST00000292729 CTDSPL2Q05D32 466 aa12.22□□□□□ -0.45
USP41-201ENST00000292729 TCF15Q12870 199 aa12.22□□□□□ -0.45
USP41-201ENST00000292729 IER5LQ5T953 404 aa12.22□□□□□ -0.45
USP41-201ENST00000292729 APBB2Q92870 758 aa12.22□□□□□ -0.45
USP41-201ENST00000292729 TMEM47Q9BQJ4 181 aa12.22□□□□□ -0.45
USP41-201ENST00000292729 CD207Q9UJ71 328 aa12.22□□□□□ -0.45
USP41-201ENST00000292729 TRIOO75962 3097 aa12.22□□□□□ -0.45
USP41-201ENST00000292729 C5orf42Q9H799 3197 aa12.22□□□□□ -0.45
USP41-201ENST00000292729 SMARCA5O60264 1052 aaPredicted RBP12.21□□□□□ -0.45
USP41-201ENST00000292729 EIF3JO75822 258 aaKnown RBP12.21□□□□□ -0.45
USP41-201ENST00000292729 UPP2O95045 317 aa12.21□□□□□ -0.45
USP41-201ENST00000292729 FGRP09769 529 aa12.21□□□□□ -0.45
USP41-201ENST00000292729 ZNF286BP0CG31 522 aa12.21□□□□□ -0.45
USP41-201ENST00000292729 CTNNB1P35222 781 aa12.21□□□□□ -0.45
USP41-201ENST00000292729 ZNF543Q08ER8 600 aa12.21□□□□□ -0.45
USP41-201ENST00000292729 HYAL1Q12794 435 aa12.21□□□□□ -0.45
USP41-201ENST00000292729 ZMYM1Q5SVZ6 1142 aa12.21□□□□□ -0.45
USP41-201ENST00000292729 KCNV1Q6PIU1 500 aa12.21□□□□□ -0.45
USP41-201ENST00000292729 MCF2L2Q86YR7 1114 aa12.21□□□□□ -0.45
USP41-201ENST00000292729 FBXL6Q8N531 539 aa12.21□□□□□ -0.45
USP41-201ENST00000292729 FIBCD1Q8N539 461 aa12.21□□□□□ -0.45
USP41-201ENST00000292729 PPP2R3CQ969Q6 453 aa12.21□□□□□ -0.45
USP41-201ENST00000292729 IL17RAQ96F46 866 aa12.21□□□□□ -0.45
USP41-201ENST00000292729 TTC14Q96N46 770 aa12.21□□□□□ -0.45
USP41-201ENST00000292729 TAAR1Q96RJ0 339 aa12.21□□□□□ -0.45
USP41-201ENST00000292729 SEC62Q99442 399 aaKnown RBP12.21□□□□□ -0.45
USP41-201ENST00000292729 IFIH1Q9BYX4 1025 aaKnown RBP12.21□□□□□ -0.45
USP41-201ENST00000292729 KAT6AQ92794 2004 aa12.21□□□□□ -0.46
USP41-201ENST00000292729 ABCB11O95342 1321 aa12.2□□□□□ -0.46
USP41-201ENST00000292729 SNHG28P0DPA3 235 aa12.2□□□□□ -0.46
USP41-201ENST00000292729 BMPR1AP36894 532 aa12.2□□□□□ -0.46
USP41-201ENST00000292729 NUBP1P53384 320 aa12.2□□□□□ -0.46
USP41-201ENST00000292729 ZXDAP98168 799 aa12.2□□□□□ -0.46
USP41-201ENST00000292729 ZNF200P98182 395 aaPredicted RBP12.2□□□□□ -0.46
USP41-201ENST00000292729 DLX2Q07687 328 aaPredicted RBP12.2□□□□□ -0.46
USP41-201ENST00000292729 CLUL1Q15846 466 aa12.2□□□□□ -0.46
USP41-201ENST00000292729 USH1GQ495M9 461 aa12.2□□□□□ -0.46
USP41-201ENST00000292729 GPATCH4Q5T3I0 446 aaKnown RBP12.2□□□□□ -0.46
USP41-201ENST00000292729 SYTL5Q8TDW5 730 aaPredicted RBP12.2□□□□□ -0.46
USP41-201ENST00000292729 RMDN3Q96TC7 470 aa12.2□□□□□ -0.46
USP41-201ENST00000292729 INCENPQ9NQS7 918 aa12.2□□□□□ -0.46
USP41-201ENST00000292729 MRVI1Q9Y6F6 885 aa12.2□□□□□ -0.46
USP41-201ENST00000292729 TTC41PQ6P2S7 1318 aa12.19□□□□□ -0.46
USP41-201ENST00000292729 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.19□□□□□ -0.46
USP41-201ENST00000292729 C17orf102A2RUQ5 167 aa12.19□□□□□ -0.46
USP41-201ENST00000292729 TBX10O75333 385 aa12.19□□□□□ -0.46
USP41-201ENST00000292729 EYA4O95677 639 aa12.19□□□□□ -0.46
USP41-201ENST00000292729 SIGLEC14Q08ET2 396 aa12.19□□□□□ -0.46
USP41-201ENST00000292729 ADAM15Q13444 863 aa12.19□□□□□ -0.46
USP41-201ENST00000292729 ARHGEF16Q5VV41 709 aa12.19□□□□□ -0.46
USP41-201ENST00000292729 ATP6V0A1Q93050 837 aa12.19□□□□□ -0.46
USP41-201ENST00000292729 FSD1Q9BTV5 496 aa12.19□□□□□ -0.46
USP41-201ENST00000292729 TOMM22Q9NS69 142 aa12.19□□□□□ -0.46
USP41-201ENST00000292729 CACNA1HO95180 2353 aa12.19□□□□□ -0.46
USP41-201ENST00000292729 PLXNA3P51805 1871 aa12.19□□□□□ -0.46
USP41-201ENST00000292729 LOC730098B7Z3J9 87 aa12.18□□□□□ -0.46
USP41-201ENST00000292729 GRM6O15303 877 aa12.18□□□□□ -0.46
USP41-201ENST00000292729 MMP1P03956 469 aa12.18□□□□□ -0.46
USP41-201ENST00000292729 NR3C2P08235 984 aa12.18□□□□□ -0.46
USP41-201ENST00000292729 HOXC8P31273 242 aa12.18□□□□□ -0.46
USP41-201ENST00000292729 HIC1Q14526 733 aa12.18□□□□□ -0.46
USP41-201ENST00000292729 CBX2Q14781 532 aaPredicted RBP12.18□□□□□ -0.46
USP41-201ENST00000292729 MYSM1Q5VVJ2 828 aa12.18□□□□□ -0.46
USP41-201ENST00000292729 CLP1Q92989 425 aaKnown RBP12.18□□□□□ -0.46
USP41-201ENST00000292729 MSLNLQ96KJ4 702 aa12.18□□□□□ -0.46
USP41-201ENST00000292729 PLVAPQ9BX97 442 aa12.18□□□□□ -0.46
USP41-201ENST00000292729 IGFLR1Q9H665 355 aa12.18□□□□□ -0.46
USP41-201ENST00000292729 COL20A1Q9P218 1284 aa12.18□□□□□ -0.46
USP41-201ENST00000292729 TTC3P53804 2025 aa12.18□□□□□ -0.46
USP41-201ENST00000292729 CFAP54Q96N23 3096 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms