RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 SLU7O95391 586 aaKnown RBP18.82■□□□□ 0.6
CPSF4-201ENST00000292476 SREBF1P36956 1147 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 HMGCS2P54868 508 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 PDIA5Q14554 519 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 SAMD1Q6SPF0 538 aaPredicted RBP18.82■□□□□ 0.6
CPSF4-201ENST00000292476 SMAP1Q8IYB5 467 aaPredicted RBP18.82■□□□□ 0.6
CPSF4-201ENST00000292476 EPSTI1Q96J88 318 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 MTMR9Q96QG7 549 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 TMEM60Q9H2L4 133 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 ZSCAN12O43309 604 aa18.81■□□□□ 0.6
CPSF4-201ENST00000292476 CFBP00751 764 aa18.81■□□□□ 0.6
CPSF4-201ENST00000292476 GJA5P36382 358 aa18.81■□□□□ 0.6
CPSF4-201ENST00000292476 FXR2P51116 673 aaKnown RBP eCLIP18.81■□□□□ 0.6
CPSF4-201ENST00000292476 ARHGAP4P98171 946 aa18.81■□□□□ 0.6
CPSF4-201ENST00000292476 ERO1BQ86YB8 467 aa18.81■□□□□ 0.6
CPSF4-201ENST00000292476 SLFN12Q8IYM2 578 aa18.81■□□□□ 0.6
CPSF4-201ENST00000292476 OPTNQ96CV9 577 aa18.81■□□□□ 0.6
CPSF4-201ENST00000292476 INTS13Q9NVM9 706 aa18.81■□□□□ 0.6
CPSF4-201ENST00000292476 TSKSQ9UJT2 592 aa18.81■□□□□ 0.6
CPSF4-201ENST00000292476 CXCL11O14625 94 aa18.8■□□□□ 0.6
CPSF4-201ENST00000292476 TBX3O15119 743 aa18.8■□□□□ 0.6
CPSF4-201ENST00000292476 CYP3A4P08684 503 aa18.8■□□□□ 0.6
CPSF4-201ENST00000292476 IL17AQ16552 155 aa18.8■□□□□ 0.6
CPSF4-201ENST00000292476 SPECC1LQ69YQ0 1117 aa18.8■□□□□ 0.6
CPSF4-201ENST00000292476 PDILTQ8N807 584 aa18.8■□□□□ 0.6
CPSF4-201ENST00000292476 CUEDC2Q9H467 287 aa18.8■□□□□ 0.6
CPSF4-201ENST00000292476 STK24Q9Y6E0 443 aa18.8■□□□□ 0.6
CPSF4-201ENST00000292476 VWA5AO00534 786 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 OPLAHO14841 1288 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 STX10O60499 249 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 TDP2O95551 362 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 DSG3P32926 999 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 CIITAP33076 1130 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 ETF1P62495 437 aaKnown RBP18.79■□□□□ 0.6
CPSF4-201ENST00000292476 GHRHRQ02643 423 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 SPATA1Q5VX52 437 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 CATSPERGQ6ZRH7 1159 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 POTEDQ86YR6 584 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 RASSF8Q8NHQ8 419 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 DHX58Q96C10 678 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 OTUD5Q96G74 571 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 PAGE5Q96GU1 130 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 MBOAT7Q96N66 472 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 MAGEF1Q9HAY2 307 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 ZNF536O15090 1300 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 A0A1B0GTH6 734 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 SLC26A4O43511 780 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 ZBTB48P10074 688 aaPredicted RBP18.79■□□□□ 0.6
CPSF4-201ENST00000292476 CDK11BP21127 795 aaKnown RBP18.79■□□□□ 0.6
CPSF4-201ENST00000292476 DPYDQ12882 1025 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 Q4G0T1 1027 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 USP49Q70CQ1 688 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 TMEM139Q8IV31 216 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 IGSF22Q8N9C0 903 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 PROCA1Q8NCQ7 364 aaPredicted RBP18.79■□□□□ 0.6
CPSF4-201ENST00000292476 CRYGNQ8WXF5 182 aa18.79■□□□□ 0.6
CPSF4-201ENST00000292476 MYL1P05976 194 aa18.78■□□□□ 0.6
CPSF4-201ENST00000292476 TXKP42681 527 aa18.78■□□□□ 0.6
CPSF4-201ENST00000292476 SEMA3FQ13275 785 aa18.78■□□□□ 0.6
CPSF4-201ENST00000292476 TKFCQ3LXA3 575 aa18.78■□□□□ 0.6
CPSF4-201ENST00000292476 CALML4Q96GE6 196 aa18.78■□□□□ 0.6
CPSF4-201ENST00000292476 AGBL1Q96MI9 1066 aa18.78■□□□□ 0.6
CPSF4-201ENST00000292476 CTAGE1Q96RT6 745 aa18.78■□□□□ 0.6
CPSF4-201ENST00000292476 SRRTQ9BXP5 876 aaKnown RBP18.78■□□□□ 0.6
CPSF4-201ENST00000292476 DISC1Q9NRI5 854 aa18.78■□□□□ 0.6
CPSF4-201ENST00000292476 ZNF215Q9UL58 517 aaPredicted RBP18.78■□□□□ 0.6
CPSF4-201ENST00000292476 ADAMTS5Q9UNA0 930 aa18.78■□□□□ 0.6
CPSF4-201ENST00000292476 PHIPQ8WWQ0 1821 aa18.77■□□□□ 0.6
CPSF4-201ENST00000292476 A0A087X0B3 334 aa18.77■□□□□ 0.6
CPSF4-201ENST00000292476 SPDYE5A6NIY4 337 aa18.77■□□□□ 0.6
CPSF4-201ENST00000292476 ATP2A1O14983 1001 aa18.77■□□□□ 0.6
CPSF4-201ENST00000292476 SLC37A4O43826 429 aa18.77■□□□□ 0.6
CPSF4-201ENST00000292476 ZNF76P36508 570 aa18.77■□□□□ 0.6
CPSF4-201ENST00000292476 STAT6P42226 847 aa18.77■□□□□ 0.6
CPSF4-201ENST00000292476 TECP42680 631 aa18.77■□□□□ 0.6
CPSF4-201ENST00000292476 HSD17B4P51659 736 aa18.77■□□□□ 0.6
CPSF4-201ENST00000292476 CUL4BQ13620 913 aa18.77■□□□□ 0.6
CPSF4-201ENST00000292476 NR1I3Q14994 352 aa18.77■□□□□ 0.6
CPSF4-201ENST00000292476 RRAGBQ5VZM2 374 aa18.77■□□□□ 0.6
CPSF4-201ENST00000292476 CPXCR1Q8N123 301 aa18.77■□□□□ 0.6
CPSF4-201ENST00000292476 ZNF397Q8NF99 534 aaPredicted RBP18.77■□□□□ 0.6
CPSF4-201ENST00000292476 FAM20AQ96MK3 541 aa18.77■□□□□ 0.6
CPSF4-201ENST00000292476 LRWD1Q9UFC0 647 aa18.77■□□□□ 0.6
CPSF4-201ENST00000292476 PCDHA12Q9UN75 941 aa18.77■□□□□ 0.6
CPSF4-201ENST00000292476 SYNRGQ9UMZ2 1314 aa18.77■□□□□ 0.59
CPSF4-201ENST00000292476 ALAS1P13196 640 aa18.76■□□□□ 0.59
CPSF4-201ENST00000292476 HOXA13P31271 388 aaPredicted RBP18.76■□□□□ 0.59
CPSF4-201ENST00000292476 CABP7Q86V35 215 aa18.76■□□□□ 0.59
CPSF4-201ENST00000292476 GRAMD1CQ8IYS0 662 aa18.76■□□□□ 0.59
CPSF4-201ENST00000292476 RAVER2Q9HCJ3 691 aaKnown RBP18.76■□□□□ 0.59
CPSF4-201ENST00000292476 EDIL3O43854 480 aa18.76■□□□□ 0.59
CPSF4-201ENST00000292476 TRPA1O75762 1119 aa18.76■□□□□ 0.59
CPSF4-201ENST00000292476 CTCFP49711 727 aaPredicted RBP18.76■□□□□ 0.59
CPSF4-201ENST00000292476 SREBF2Q12772 1141 aa18.76■□□□□ 0.59
CPSF4-201ENST00000292476 PABPC4Q13310 644 aaKnown RBP eCLIP18.76■□□□□ 0.59
CPSF4-201ENST00000292476 PPIL2Q13356 520 aa18.76■□□□□ 0.59
CPSF4-201ENST00000292476 E2F4Q16254 413 aa18.76■□□□□ 0.59
CPSF4-201ENST00000292476 CDKAL1Q5VV42 579 aa18.76■□□□□ 0.59
CPSF4-201ENST00000292476 KRT79Q5XKE5 535 aa18.76■□□□□ 0.59
CPSF4-201ENST00000292476 SYT10Q6XYQ8 523 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms