RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 IRX5P78411 483 aaPredicted RBP30.69■■■□□ 2.5
SSU72-201ENST00000291386 GNASQ5JWF2 1037 aa30.69■■■□□ 2.5
SSU72-201ENST00000291386 SNX21Q969T3 373 aa30.69■■■□□ 2.5
SSU72-201ENST00000291386 SENP7Q9BQF6 1050 aa30.69■■■□□ 2.5
SSU72-201ENST00000291386 MXRA8Q9BRK3 442 aa30.69■■■□□ 2.5
SSU72-201ENST00000291386 SP2Q02086 613 aa30.68■■■□□ 2.5
SSU72-201ENST00000291386 ARHGAP1Q07960 439 aa30.68■■■□□ 2.5
SSU72-201ENST00000291386 CUL4AQ13619 759 aa30.68■■■□□ 2.5
SSU72-201ENST00000291386 KCNA10Q16322 511 aa30.68■■■□□ 2.5
SSU72-201ENST00000291386 FSCN1Q16658 493 aaKnown RBP30.68■■■□□ 2.5
SSU72-201ENST00000291386 CEP55Q53EZ4 464 aa30.68■■■□□ 2.5
SSU72-201ENST00000291386 A6NJR5 290 aa30.67■■■□□ 2.5
SSU72-201ENST00000291386 MMP1P03956 469 aa30.67■■■□□ 2.5
SSU72-201ENST00000291386 MYCNP04198 464 aaPredicted RBP30.67■■■□□ 2.5
SSU72-201ENST00000291386 UBA1P22314 1058 aaKnown RBP30.67■■■□□ 2.5
SSU72-201ENST00000291386 CIITAP33076 1130 aa30.67■■■□□ 2.5
SSU72-201ENST00000291386 CPT1AP50416 773 aa30.67■■■□□ 2.5
SSU72-201ENST00000291386 ACLYP53396 1101 aa30.67■■■□□ 2.5
SSU72-201ENST00000291386 TRIM29Q14134 588 aa30.67■■■□□ 2.5
SSU72-201ENST00000291386 KRT40Q6A162 431 aa30.67■■■□□ 2.5
SSU72-201ENST00000291386 NIPA1Q7RTP0 329 aa30.67■■■□□ 2.5
SSU72-201ENST00000291386 KRT25Q7Z3Z0 450 aa30.67■■■□□ 2.5
SSU72-201ENST00000291386 FAM184AQ8NB25 1140 aa30.67■■■□□ 2.5
SSU72-201ENST00000291386 MEIS1O00470 390 aa30.66■■■□□ 2.5
SSU72-201ENST00000291386 ZEB2O60315 1214 aa30.66■■■□□ 2.5
SSU72-201ENST00000291386 USP11P51784 963 aa30.66■■■□□ 2.5
SSU72-201ENST00000291386 BEX3Q00994 111 aa30.66■■■□□ 2.5
SSU72-201ENST00000291386 MTMR1Q13613 665 aa30.66■■■□□ 2.5
SSU72-201ENST00000291386 LAMC2Q13753 1193 aa30.66■■■□□ 2.5
SSU72-201ENST00000291386 NEDD9Q14511 834 aa30.66■■■□□ 2.5
SSU72-201ENST00000291386 CELF3Q5SZQ8 465 aaKnown RBP30.66■■■□□ 2.5
SSU72-201ENST00000291386 BRMS1Q9HCU9 246 aa30.66■■■□□ 2.5
SSU72-201ENST00000291386 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.66■■■□□ 2.5
SSU72-201ENST00000291386 ASGR1P07306 291 aa30.65■■■□□ 2.5
SSU72-201ENST00000291386 KRT2P35908 639 aa30.65■■■□□ 2.5
SSU72-201ENST00000291386 BRDTQ58F21 947 aaPredicted RBP30.65■■■□□ 2.5
SSU72-201ENST00000291386 MYSM1Q5VVJ2 828 aa30.65■■■□□ 2.5
SSU72-201ENST00000291386 DHX37Q8IY37 1157 aaKnown RBP30.65■■■□□ 2.5
SSU72-201ENST00000291386 C8orf76Q96K31 380 aa30.65■■■□□ 2.5
SSU72-201ENST00000291386 EDIL3O43854 480 aa30.64■■■□□ 2.5
SSU72-201ENST00000291386 GGPS1O95749 300 aa30.64■■■□□ 2.5
SSU72-201ENST00000291386 MLLT1Q03111 559 aaPredicted RBP30.64■■■□□ 2.5
SSU72-201ENST00000291386 NONOQ15233 471 aaKnown RBP eCLIP30.64■■■□□ 2.59e-7■■■■□ 21.9
SSU72-201ENST00000291386 GIMAP8Q8ND71 665 aaPredicted RBP30.64■■■□□ 2.5
SSU72-201ENST00000291386 CYP2W1Q8TAV3 490 aa30.64■■■□□ 2.5
SSU72-201ENST00000291386 OXER1Q8TDS5 423 aa30.64■■■□□ 2.5
SSU72-201ENST00000291386 TBCKQ8TEA7 893 aa30.64■■■□□ 2.5
SSU72-201ENST00000291386 TNFRSF25Q93038 417 aa30.64■■■□□ 2.5
SSU72-201ENST00000291386 HTATIP2Q9BUP3 242 aa30.64■■■□□ 2.5
SSU72-201ENST00000291386 SENP6Q9GZR1 1112 aaPredicted RBP30.64■■■□□ 2.5
SSU72-201ENST00000291386 KIF3AQ9Y496 699 aa30.64■■■□□ 2.5
SSU72-201ENST00000291386 A0A1W2PQ45 241 aaPredicted RBP30.63■■■□□ 2.49
SSU72-201ENST00000291386 A0A1W2PQY0 241 aa30.63■■■□□ 2.49
SSU72-201ENST00000291386 FAM86B1E9PN63 330 aa30.63■■■□□ 2.49
SSU72-201ENST00000291386 FAM86B2P0C5J1 330 aa30.63■■■□□ 2.49
SSU72-201ENST00000291386 ZNF76P36508 570 aa30.63■■■□□ 2.49
SSU72-201ENST00000291386 FBXO18Q8NFZ0 1043 aa30.63■■■□□ 2.49
SSU72-201ENST00000291386 KCNH7Q9NS40 1196 aa30.63■■■□□ 2.49
SSU72-201ENST00000291386 IGLV3-22A0A075B6J6 115 aa30.62■■■□□ 2.49
SSU72-201ENST00000291386 K7ELQ4 463 aaPredicted RBP30.62■■■□□ 2.49
SSU72-201ENST00000291386 KPNA6O60684 536 aa30.62■■■□□ 2.49
SSU72-201ENST00000291386 CABYRO75952 493 aa30.62■■■□□ 2.49
SSU72-201ENST00000291386 KCNA2P16389 499 aa30.62■■■□□ 2.49
SSU72-201ENST00000291386 C1orf53Q5VUE5 145 aa30.62■■■□□ 2.49
SSU72-201ENST00000291386 METTL7BQ6UX53 244 aa30.62■■■□□ 2.49
SSU72-201ENST00000291386 PPTC7Q8NI37 304 aa30.62■■■□□ 2.49
SSU72-201ENST00000291386 POLR3EQ9NVU0 708 aa30.62■■■□□ 2.49
SSU72-201ENST00000291386 ELP1O95163 1332 aa30.62■■■□□ 2.49
SSU72-201ENST00000291386 CCDC194A0A1B0GVG4 234 aa30.61■■■□□ 2.49
SSU72-201ENST00000291386 ATP9AO75110 1047 aa30.61■■■□□ 2.49
SSU72-201ENST00000291386 MMP3P08254 477 aa30.61■■■□□ 2.49
SSU72-201ENST00000291386 MOXD1Q6UVY6 613 aa30.61■■■□□ 2.49
SSU72-201ENST00000291386 DIS3L2Q8IYB7 885 aaKnown RBP30.61■■■□□ 2.49
SSU72-201ENST00000291386 AFG1LQ8WV93 481 aa30.61■■■□□ 2.49
SSU72-201ENST00000291386 GLT1D1Q96MS3 346 aa30.61■■■□□ 2.49
SSU72-201ENST00000291386 MLXIPQ9HAP2 919 aa30.61■■■□□ 2.49
SSU72-201ENST00000291386 ARP10275 920 aa30.6■■■□□ 2.49
SSU72-201ENST00000291386 HOXD8P13378 290 aaPredicted RBP30.6■■■□□ 2.49
SSU72-201ENST00000291386 GJB2P29033 226 aa30.6■■■□□ 2.49
SSU72-201ENST00000291386 SETQ01105 290 aaPredicted RBP30.6■■■□□ 2.49
SSU72-201ENST00000291386 SNX17Q15036 470 aa30.6■■■□□ 2.49
SSU72-201ENST00000291386 SLC39A5Q6ZMH5 540 aa30.6■■■□□ 2.49
SSU72-201ENST00000291386 FERMT2Q96AC1 680 aa30.6■■■□□ 2.49
SSU72-201ENST00000291386 ALPK3Q96L96 1907 aa30.6■■■□□ 2.49
SSU72-201ENST00000291386 DOCK5Q9H7D0 1870 aa30.6■■■□□ 2.49
SSU72-201ENST00000291386 SMC3Q9UQE7 1217 aa30.6■■■□□ 2.49
SSU72-201ENST00000291386 NFASCO94856 1347 aa30.59■■■□□ 2.49
SSU72-201ENST00000291386 CYP3A7-CYP3A51PA0A087WV96 503 aa30.59■■■□□ 2.49
SSU72-201ENST00000291386 BTBD18B2RXH4 712 aa30.59■■■□□ 2.49
SSU72-201ENST00000291386 CYP3A7P24462 503 aa30.59■■■□□ 2.49
SSU72-201ENST00000291386 FOSBP53539 338 aa30.59■■■□□ 2.49
SSU72-201ENST00000291386 PURAQ00577 322 aaKnown RBP30.59■■■□□ 2.49
SSU72-201ENST00000291386 NR5A1Q13285 461 aa30.59■■■□□ 2.49
SSU72-201ENST00000291386 SAFBQ15424 915 aaKnown RBP eCLIP30.59■■■□□ 2.49
SSU72-201ENST00000291386 PLA2G4DQ86XP0 818 aa30.59■■■□□ 2.49
SSU72-201ENST00000291386 INTS4Q96HW7 963 aaKnown RBP30.59■■■□□ 2.49
SSU72-201ENST00000291386 SPATA33Q96N06 139 aa30.59■■■□□ 2.49
SSU72-201ENST00000291386 BCAS3Q9H6U6 928 aa30.59■■■□□ 2.49
SSU72-201ENST00000291386 AGO4Q9HCK5 861 aaKnown RBP30.59■■■□□ 2.49
SSU72-201ENST00000291386 STARD7Q9NQZ5 370 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms