RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 SH2D3AQ9BRG2 576 aa17.52■□□□□ 0.39
SMAD6-201ENST00000288840 SELENOOQ9BVL4 669 aa17.52■□□□□ 0.39
SMAD6-201ENST00000288840 CAPN6Q9Y6Q1 641 aa17.52■□□□□ 0.39
SMAD6-201ENST00000288840 IVLP07476 585 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 ACTN2P35609 894 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 PPP1R2P41236 205 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 TUBB4BP68371 445 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 COASYQ13057 564 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 UHMK1Q8TAS1 419 aaKnown RBP17.51■□□□□ 0.39
SMAD6-201ENST00000288840 BHMT2Q9H2M3 363 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 SCN11AQ9UI33 1791 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 PALM3A6NDB9 673 aaPredicted RBP17.51■□□□□ 0.39
SMAD6-201ENST00000288840 LRRIQ3A6PVS8 624 aaPredicted RBP17.51■□□□□ 0.39
SMAD6-201ENST00000288840 TRIM66O15016 1216 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 SORBS3O60504 671 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 ZRANB2O95218 330 aaKnown RBP eCLIP17.51■□□□□ 0.39
SMAD6-201ENST00000288840 TUBBP07437 444 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 ACTN1P12814 892 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 SEPT2Q15019 361 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 ASPRV1Q53RT3 343 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 ELOA2Q8IYF1 753 aaPredicted RBP17.51■□□□□ 0.39
SMAD6-201ENST00000288840 SPATA20Q8TB22 786 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 AP1M1Q9BXS5 423 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 ZMYND12Q9H0C1 365 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 SEMA6BQ9H3T3 888 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 MTMR4Q9NYA4 1195 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 SPATA31A5Q5VU36 1347 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 SPATA31A7Q8IWB4 1347 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 RCCD1A6NED2 376 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 PPEF1O14829 653 aaPredicted RBP17.51■□□□□ 0.39
SMAD6-201ENST00000288840 XRCC5P13010 732 aaKnown RBP17.51■□□□□ 0.39
SMAD6-201ENST00000288840 CCT5P48643 541 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 KCNB1Q14721 858 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 RPS6KA1Q15418 735 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 IRF2BP1Q8IU81 584 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 KBTBD4Q9NVX7 518 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 JRKLQ9Y4A0 524 aa17.51■□□□□ 0.39
SMAD6-201ENST00000288840 USP14P54578 494 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 GNGT1P63211 74 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 TNFRSF25Q93038 417 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 DUSP9Q99956 384 aaKnown RBP17.5■□□□□ 0.39
SMAD6-201ENST00000288840 DPH5Q9H2P9 285 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 NFU1Q9UMS0 254 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 ATRNO75882 1429 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 PALMO75781 387 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 HEXIM1O94992 359 aaKnown RBP17.5■□□□□ 0.39
SMAD6-201ENST00000288840 ARHGAP25P42331 645 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 HAUS3Q68CZ6 603 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 CCDC170Q8IYT3 715 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 FAM71BQ8TC56 605 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 RAD54LQ92698 747 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 RASSF4Q9H2L5 321 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 ITIH6Q6UXX5 1313 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 PNMA6FA0A0J9YX94 578 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 NDUFAB1O14561 156 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 EPB41P11171 864 aaKnown RBP17.5■□□□□ 0.39
SMAD6-201ENST00000288840 CTTNQ14247 550 aaKnown RBP17.5■□□□□ 0.39
SMAD6-201ENST00000288840 HS2ST1Q7LGA3 356 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 KCNK18Q7Z418 384 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 TBC1D16Q8TBP0 767 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 BCAS4Q8TDM0 211 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 CTNNBL1Q8WYA6 563 aaPredicted RBP17.5■□□□□ 0.39
SMAD6-201ENST00000288840 NT5C3AQ9H0P0 336 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 POLLQ9UGP5 575 aa17.5■□□□□ 0.39
SMAD6-201ENST00000288840 EBAG9O00559 213 aa17.49■□□□□ 0.39
SMAD6-201ENST00000288840 EPHB6O15197 1021 aa17.49■□□□□ 0.39
SMAD6-201ENST00000288840 OPA1O60313 960 aa17.49■□□□□ 0.39
SMAD6-201ENST00000288840 LRRN2O75325 713 aa17.49■□□□□ 0.39
SMAD6-201ENST00000288840 NFIAQ12857 509 aa17.49■□□□□ 0.39
SMAD6-201ENST00000288840 CDC37Q16543 378 aaPredicted RBP17.49■□□□□ 0.39
SMAD6-201ENST00000288840 FAM83BQ5T0W9 1011 aa17.49■□□□□ 0.39
SMAD6-201ENST00000288840 RETREG2Q8NC44 543 aa17.49■□□□□ 0.39
SMAD6-201ENST00000288840 KIAA0895Q8NCT3 520 aa17.49■□□□□ 0.39
SMAD6-201ENST00000288840 TCP1P17987 556 aaKnown RBP17.49■□□□□ 0.39
SMAD6-201ENST00000288840 QRICH1Q2TAL8 776 aa17.49■□□□□ 0.39
SMAD6-201ENST00000288840 AMIGO3Q86WK7 504 aa17.49■□□□□ 0.39
SMAD6-201ENST00000288840 STK17AQ9UEE5 414 aa17.49■□□□□ 0.39
SMAD6-201ENST00000288840 GRB10Q13322 594 aa17.49■□□□□ 0.39
SMAD6-201ENST00000288840 PEX26Q7Z412 305 aa17.49■□□□□ 0.39
SMAD6-201ENST00000288840 FBXO11Q86XK2 927 aa17.49■□□□□ 0.39
SMAD6-201ENST00000288840 EXOC4Q96A65 974 aa17.49■□□□□ 0.39
SMAD6-201ENST00000288840 KCND1Q9NSA2 647 aa17.49■□□□□ 0.39
SMAD6-201ENST00000288840 A0A1W2PQC6 194 aa17.48■□□□□ 0.39
SMAD6-201ENST00000288840 EEF2P13639 858 aaKnown RBP17.48■□□□□ 0.39
SMAD6-201ENST00000288840 EXOC3L4Q17RC7 722 aa17.48■□□□□ 0.39
SMAD6-201ENST00000288840 DAAM2Q86T65 1068 aa17.48■□□□□ 0.39
SMAD6-201ENST00000288840 CCDC25Q86WR0 208 aa17.48■□□□□ 0.39
SMAD6-201ENST00000288840 HDAC7Q8WUI4 952 aa17.48■□□□□ 0.39
SMAD6-201ENST00000288840 OSBPL9Q96SU4 736 aa17.48■□□□□ 0.39
SMAD6-201ENST00000288840 SPZ1Q9BXG8 430 aa17.48■□□□□ 0.39
SMAD6-201ENST00000288840 GJC1P36383 396 aa17.48■□□□□ 0.39
SMAD6-201ENST00000288840 APTXQ7Z2E3 356 aaKnown RBP17.48■□□□□ 0.39
SMAD6-201ENST00000288840 ANO3Q9BYT9 981 aa17.48■□□□□ 0.39
SMAD6-201ENST00000288840 RGL1Q9NZL6 768 aa17.48■□□□□ 0.39
SMAD6-201ENST00000288840 KIF1AQ12756 1690 aa17.48■□□□□ 0.39
SMAD6-201ENST00000288840 PDS5AQ29RF7 1337 aaKnown RBP17.48■□□□□ 0.39
SMAD6-201ENST00000288840 NKRFO15226 690 aaKnown RBP eCLIP17.48■□□□□ 0.39
SMAD6-201ENST00000288840 BBOX1O75936 387 aa17.48■□□□□ 0.39
SMAD6-201ENST00000288840 GFPT2O94808 682 aa17.48■□□□□ 0.39
SMAD6-201ENST00000288840 ERLIN2O94905 339 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms