RNA–Protein interactions for RNA: ENST00000288050.8

PDPR-201, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPR, Length 9,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPR-201ENST00000288050 SYNDIG1LA6NDD5 238 aa10.68□□□□□ -0.7
PDPR-201ENST00000288050 MAPK13O15264 365 aa10.68□□□□□ -0.7
PDPR-201ENST00000288050 TMED2Q15363 201 aa10.68□□□□□ -0.7
PDPR-201ENST00000288050 RBM46Q8TBY0 533 aaKnown RBP10.68□□□□□ -0.7
PDPR-201ENST00000288050 PHACTR3Q96KR7 559 aa10.68□□□□□ -0.7
PDPR-201ENST00000288050 KIF2CQ99661 725 aa10.68□□□□□ -0.7
PDPR-201ENST00000288050 SOX5P35711 763 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 MAGEA1P43355 309 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 NLRP3Q96P20 1036 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 QKIQ96PU8 341 aaKnown RBP eCLIP10.67□□□□□ -0.7
PDPR-201ENST00000288050 MRPS35P82673 323 aaKnown RBP10.67□□□□□ -0.7
PDPR-201ENST00000288050 LETM2Q2VYF4 491 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 MCMDC2Q4G0Z9 681 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 NFRKBQ6P4R8 1299 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 COPS6Q7L5N1 327 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 PCGF5Q86SE9 256 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 DENND6AQ8IWF6 608 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 MYCT1Q8N699 235 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 SCG3Q8WXD2 468 aaKnown RBP10.67□□□□□ -0.7
PDPR-201ENST00000288050 MYCLP12524 364 aaPredicted RBP10.67□□□□□ -0.7
PDPR-201ENST00000288050 GNPTABQ3T906 1256 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.67□□□□□ -0.7
PDPR-201ENST00000288050 DEPDC1BQ8WUY9 529 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.67□□□□□ -0.7
PDPR-201ENST00000288050 A2MP01023 1474 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 RNF103-CHMP3A0A140T963 221 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 HNRNPRO43390 633 aaKnown RBP10.67□□□□□ -0.7
PDPR-201ENST00000288050 PTPREP23469 700 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 CTTNQ14247 550 aaKnown RBP10.67□□□□□ -0.7
PDPR-201ENST00000288050 RRM2BQ7LG56 351 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 C2CD5Q86YS7 1000 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 FAM193BQ96PV7 902 aaPredicted RBP10.67□□□□□ -0.7
PDPR-201ENST00000288050 KCNG1Q9UIX4 513 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 BMP2KLQ5H9B9 411 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 CDR2LQ86X02 465 aaPredicted RBP10.67□□□□□ -0.7
PDPR-201ENST00000288050 DEPDC7Q96QD5 511 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 NYXQ9GZU5 481 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 H7C0C1 242 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 ATP5OP48047 213 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 AARSP49588 968 aaKnown RBP eCLIP10.67□□□□□ -0.7
PDPR-201ENST00000288050 TP53BP2Q13625 1128 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 C1orf146Q5VVC0 180 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 TTC30BQ8N4P2 665 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 METTL13Q8N6R0 699 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 ZNF555Q8NEP9 628 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 SLC8A2Q9UPR5 921 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 N4BP1O75113 896 aaKnown RBP10.67□□□□□ -0.7
PDPR-201ENST00000288050 MYO1EQ12965 1108 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 U2AF1L4Q8WU68 220 aaKnown RBP10.67□□□□□ -0.7
PDPR-201ENST00000288050 ZNF518AQ6AHZ1 1483 aa10.67□□□□□ -0.7
PDPR-201ENST00000288050 TADA1Q96BN2 335 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 ADNPQ9H2P0 1102 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 STON1Q9Y6Q2 735 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 DDX5P17844 614 aaKnown RBP10.66□□□□□ -0.7
PDPR-201ENST00000288050 MAEAQ7L5Y9 396 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 CRLF3Q8IUI8 442 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 C1orf112Q9NSG2 853 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 DDX39AO00148 427 aaKnown RBP10.66□□□□□ -0.7
PDPR-201ENST00000288050 ALDH1L1O75891 902 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 XRCC5P13010 732 aaKnown RBP10.66□□□□□ -0.7
PDPR-201ENST00000288050 ABCB4P21439 1286 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 SBNO2Q9Y2G9 1366 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 RGS9BPQ6ZS82 235 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 DNAAF3Q8N9W5 541 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 CATSPER1Q8NEC5 780 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 SAP30BPQ9UHR5 308 aaKnown RBP10.66□□□□□ -0.7
PDPR-201ENST00000288050 WDR64B1ANS9 1081 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 VCPP55072 806 aaKnown RBP10.66□□□□□ -0.7
PDPR-201ENST00000288050 ARHGAP17Q68EM7 881 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 MCTP2Q6DN12 878 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 ANO5Q75V66 913 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 ANKRD49Q8WVL7 239 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 SMYD3Q9H7B4 428 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 PDE11AQ9HCR9 933 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 INTS13Q9NVM9 706 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 SYBUQ9NX95 663 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 STAT1P42224 750 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 KRR1Q13601 381 aaKnown RBP10.66□□□□□ -0.7
PDPR-201ENST00000288050 UNC45BQ8IWX7 931 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 MAGEB6Q8N7X4 407 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 MIGA1Q8NAN2 632 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 UBE2OQ9C0C9 1292 aaKnown RBP10.66□□□□□ -0.7
PDPR-201ENST00000288050 TMEM60Q9H2L4 133 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 TK2O00142 265 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 E2F4Q16254 413 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 RRAGAQ7L523 313 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 VPS37AQ8NEZ2 397 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 GDAP1Q8TB36 358 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 CTNND1O60716 968 aaKnown RBP10.66□□□□□ -0.7
PDPR-201ENST00000288050 KCTD16Q68DU8 428 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 MTRQ99707 1265 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 SLF1Q9BQI6 1058 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 RPAP3Q9H6T3 665 aaPredicted RBP10.66□□□□□ -0.7
PDPR-201ENST00000288050 ZNF148Q9UQR1 794 aa10.66□□□□□ -0.7
PDPR-201ENST00000288050 FANCCQ00597 558 aa10.65□□□□□ -0.7
PDPR-201ENST00000288050 KRT27Q7Z3Y8 459 aa10.65□□□□□ -0.7
PDPR-201ENST00000288050 THAP11Q96EK4 314 aa10.65□□□□□ -0.7
PDPR-201ENST00000288050 LSM14BQ9BX40 385 aaKnown RBP10.65□□□□□ -0.7
PDPR-201ENST00000288050 MYLK2Q9H1R3 596 aa10.65□□□□□ -0.7
PDPR-201ENST00000288050 KDM4CQ9H3R0 1056 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms