RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 ASGR1P07306 291 aa22.69■■□□□ 1.22
TIMP4-201ENST00000287814 TGFB3P10600 412 aa22.69■■□□□ 1.22
TIMP4-201ENST00000287814 XBP1P17861 261 aa22.69■■□□□ 1.22
TIMP4-201ENST00000287814 UBA1P22314 1058 aaKnown RBP22.69■■□□□ 1.22
TIMP4-201ENST00000287814 ACLYP53396 1101 aa22.69■■□□□ 1.22
TIMP4-201ENST00000287814 GNPTABQ3T906 1256 aa22.69■■□□□ 1.22
TIMP4-201ENST00000287814 GALNT17Q6IS24 598 aa22.69■■□□□ 1.22
TIMP4-201ENST00000287814 TSEN34Q9BSV6 310 aaKnown RBP22.69■■□□□ 1.22
TIMP4-201ENST00000287814 GH1P01241 217 aa22.68■■□□□ 1.22
TIMP4-201ENST00000287814 MCTP2Q6DN12 878 aa22.68■■□□□ 1.22
TIMP4-201ENST00000287814 KCNV1Q6PIU1 500 aa22.68■■□□□ 1.22
TIMP4-201ENST00000287814 MXRA8Q9BRK3 442 aa22.68■■□□□ 1.22
TIMP4-201ENST00000287814 JADE2Q9NQC1 790 aa22.68■■□□□ 1.22
TIMP4-201ENST00000287814 FIBPO43427 364 aa22.68■■□□□ 1.22
TIMP4-201ENST00000287814 ATP9AO75110 1047 aa22.68■■□□□ 1.22
TIMP4-201ENST00000287814 NLRX1Q86UT6 975 aa22.68■■□□□ 1.22
TIMP4-201ENST00000287814 A0A1W2PQ45 241 aaPredicted RBP22.67■■□□□ 1.22
TIMP4-201ENST00000287814 A0A1W2PQY0 241 aa22.67■■□□□ 1.22
TIMP4-201ENST00000287814 A6NJR5 290 aa22.67■■□□□ 1.22
TIMP4-201ENST00000287814 FAM86B1E9PN63 330 aa22.67■■□□□ 1.22
TIMP4-201ENST00000287814 GGPS1O95749 300 aa22.67■■□□□ 1.22
TIMP4-201ENST00000287814 CYP3A4P08684 503 aa22.67■■□□□ 1.22
TIMP4-201ENST00000287814 FAM86B2P0C5J1 330 aa22.67■■□□□ 1.22
TIMP4-201ENST00000287814 ATN1P54259 1190 aaPredicted RBP22.67■■□□□ 1.22
TIMP4-201ENST00000287814 HMGN5P82970 282 aaKnown RBP22.67■■□□□ 1.22
TIMP4-201ENST00000287814 CELF3Q5SZQ8 465 aaKnown RBP22.67■■□□□ 1.22
TIMP4-201ENST00000287814 MYSM1Q5VVJ2 828 aa22.67■■□□□ 1.22
TIMP4-201ENST00000287814 KRT40Q6A162 431 aa22.67■■□□□ 1.22
TIMP4-201ENST00000287814 DHX37Q8IY37 1157 aaKnown RBP22.67■■□□□ 1.22
TIMP4-201ENST00000287814 PCSK9Q8NBP7 692 aaKnown RBP22.67■■□□□ 1.22
TIMP4-201ENST00000287814 AFG1LQ8WV93 481 aa22.67■■□□□ 1.22
TIMP4-201ENST00000287814 GPRASP2Q96D09 838 aa22.67■■□□□ 1.22
TIMP4-201ENST00000287814 TELO2Q9Y4R8 837 aa22.67■■□□□ 1.22
TIMP4-201ENST00000287814 MOXD2PA6NHM9 499 aa22.66■■□□□ 1.22
TIMP4-201ENST00000287814 ARP10275 920 aa22.66■■□□□ 1.22
TIMP4-201ENST00000287814 GUCY1B3Q02153 619 aa22.66■■□□□ 1.22
TIMP4-201ENST00000287814 MTMR1Q13613 665 aa22.66■■□□□ 1.22
TIMP4-201ENST00000287814 LRRC26Q2I0M4 334 aa22.66■■□□□ 1.22
TIMP4-201ENST00000287814 CEP55Q53EZ4 464 aa22.66■■□□□ 1.22
TIMP4-201ENST00000287814 CXCL17Q6UXB2 119 aa22.66■■□□□ 1.22
TIMP4-201ENST00000287814 MEIS1O00470 390 aa22.65■■□□□ 1.22
TIMP4-201ENST00000287814 MMP1P03956 469 aa22.65■■□□□ 1.22
TIMP4-201ENST00000287814 NR5A1Q13285 461 aa22.65■■□□□ 1.22
TIMP4-201ENST00000287814 EARS2Q5JPH6 523 aaKnown RBP22.65■■□□□ 1.22
TIMP4-201ENST00000287814 TBCKQ8TEA7 893 aa22.65■■□□□ 1.22
TIMP4-201ENST00000287814 EMID1Q96A84 441 aaPredicted RBP22.65■■□□□ 1.22
TIMP4-201ENST00000287814 IGLV3-22A0A075B6J6 115 aa22.65■■□□□ 1.22
TIMP4-201ENST00000287814 KCNA2P16389 499 aa22.65■■□□□ 1.22
TIMP4-201ENST00000287814 CPT1AP50416 773 aa22.65■■□□□ 1.22
TIMP4-201ENST00000287814 LAMC2Q13753 1193 aa22.65■■□□□ 1.22
TIMP4-201ENST00000287814 HSDL1Q3SXM5 330 aa22.65■■□□□ 1.22
TIMP4-201ENST00000287814 SLC39A5Q6ZMH5 540 aa22.65■■□□□ 1.22
TIMP4-201ENST00000287814 TNFRSF25Q93038 417 aa22.65■■□□□ 1.22
TIMP4-201ENST00000287814 KCNH7Q9NS40 1196 aa22.65■■□□□ 1.22
TIMP4-201ENST00000287814 PKD2L1Q9P0L9 805 aa22.65■■□□□ 1.22
TIMP4-201ENST00000287814 BTBD18B2RXH4 712 aa22.64■■□□□ 1.21
TIMP4-201ENST00000287814 ZNF76P36508 570 aa22.64■■□□□ 1.21
TIMP4-201ENST00000287814 CUL4AQ13619 759 aa22.64■■□□□ 1.21
TIMP4-201ENST00000287814 CYFIP1Q7L576 1253 aa22.64■■□□□ 1.21
TIMP4-201ENST00000287814 FAM184AQ8NB25 1140 aa22.64■■□□□ 1.21
TIMP4-201ENST00000287814 SENP7Q9BQF6 1050 aa22.64■■□□□ 1.21
TIMP4-201ENST00000287814 FAM205CA6NFA0 338 aa22.63■■□□□ 1.21
TIMP4-201ENST00000287814 MMP3P08254 477 aa22.63■■□□□ 1.21
TIMP4-201ENST00000287814 CIITAP33076 1130 aa22.63■■□□□ 1.21
TIMP4-201ENST00000287814 KRT2P35908 639 aa22.63■■□□□ 1.21
TIMP4-201ENST00000287814 PURAQ00577 322 aaKnown RBP22.63■■□□□ 1.21
TIMP4-201ENST00000287814 TRIM29Q14134 588 aa22.63■■□□□ 1.21
TIMP4-201ENST00000287814 C8orf76Q96K31 380 aa22.63■■□□□ 1.21
TIMP4-201ENST00000287814 SPATA33Q96N06 139 aa22.63■■□□□ 1.21
TIMP4-201ENST00000287814 HTATIP2Q9BUP3 242 aa22.63■■□□□ 1.21
TIMP4-201ENST00000287814 MLXIPQ9HAP2 919 aa22.63■■□□□ 1.21
TIMP4-201ENST00000287814 MYH7BA7E2Y1 1941 aa22.63■■□□□ 1.21
TIMP4-201ENST00000287814 MAFGO15525 162 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 ZEB2O60315 1214 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 MYL3P08590 195 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 USP11P51784 963 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 NEDD9Q14511 834 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 NONOQ15233 471 aaKnown RBP eCLIP22.62■■□□□ 1.21
TIMP4-201ENST00000287814 INF2Q27J81 1249 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 KRT25Q7Z3Z0 450 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 DIS3L2Q8IYB7 885 aaKnown RBP22.62■■□□□ 1.21
TIMP4-201ENST00000287814 PPTC7Q8NI37 304 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 CDHR1Q96JP9 859 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 GLT1D1Q96MS3 346 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 UIMC1Q96RL1 719 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 STARD7Q9NQZ5 370 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 GRIN2DO15399 1336 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 PSMC6P62333 389 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 METTL7BQ6UX53 244 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 PIK3AP1Q6ZUJ8 805 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 NIPA1Q7RTP0 329 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 PLA2G4DQ86XP0 818 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 FBXO18Q8NFZ0 1043 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 DPF3Q92784 378 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 LENG9Q96B70 501 aa22.62■■□□□ 1.21
TIMP4-201ENST00000287814 AGO4Q9HCK5 861 aaKnown RBP22.62■■□□□ 1.21
TIMP4-201ENST00000287814 CCDC194A0A1B0GVG4 234 aa22.61■■□□□ 1.21
TIMP4-201ENST00000287814 GJB2P29033 226 aa22.61■■□□□ 1.21
TIMP4-201ENST00000287814 ITGB3BPQ13352 177 aaPredicted RBP22.61■■□□□ 1.21
TIMP4-201ENST00000287814 SNX17Q15036 470 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms