RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 CRYMQ14894 314 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 TCP11X2Q5H9J9 407 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 KDM7AQ6ZMT4 941 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 TRIM22Q8IYM9 498 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 SMYD4Q8IYR2 804 aaPredicted RBP11.63□□□□□ -0.55
ERCC3-201ENST00000285398 CAVIN3Q969G5 261 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 ARL8AQ96BM9 186 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 RRP36Q96EU6 259 aaKnown RBP11.63□□□□□ -0.55
ERCC3-201ENST00000285398 DNAJC7Q99615 494 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 RWDD2AQ9UIY3 292 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 ANAPC4Q9UJX5 808 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 TNKSO95271 1327 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 KCNJ18B7U540 433 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 FZD9O00144 591 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 LMNB1P20700 586 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 KCNJ12Q14500 433 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 FMNL3Q8IVF7 1028 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 CCDC13Q8IYE1 715 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 ESR2Q92731 530 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 UBAC1Q9BSL1 405 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 KRT23Q9C075 422 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 RNF41Q9H4P4 317 aaPredicted RBP11.62□□□□□ -0.55
ERCC3-201ENST00000285398 TAB2Q9NYJ8 693 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.62□□□□□ -0.55
ERCC3-201ENST00000285398 TTC26A0AVF1 554 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 ZNF185O15231 689 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 CASP1P29466 404 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 CDK8P49336 464 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 NNTQ13423 1086 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 SBK1Q52WX2 424 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 EMC10Q5UCC4 262 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 PRAMEF18Q5VWM3 479 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 DLK2Q6UY11 383 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 ZNF572Q7Z3I7 529 aaPredicted RBP11.62□□□□□ -0.55
ERCC3-201ENST00000285398 ENAHQ8N8S7 591 aaPredicted RBP11.62□□□□□ -0.55
ERCC3-201ENST00000285398 ZNF473Q8WTR7 871 aaKnown RBP11.62□□□□□ -0.55
ERCC3-201ENST00000285398 NUP133Q8WUM0 1156 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 TMEM39BQ9GZU3 492 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 VPS33BQ9H267 617 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 CNNM2Q9H8M5 875 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 ACTR5Q9H9F9 607 aaPredicted RBP11.62□□□□□ -0.55
ERCC3-201ENST00000285398 MYOZ2Q9NPC6 264 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 CNOT7Q9UIV1 285 aaKnown RBP11.62□□□□□ -0.55
ERCC3-201ENST00000285398 SRRM3A6NNA2 597 aaPredicted RBP11.62□□□□□ -0.55
ERCC3-201ENST00000285398 PPP1R37O75864 691 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 EZRP15311 586 aaKnown RBP11.62□□□□□ -0.55
ERCC3-201ENST00000285398 FKBP1AP62942 108 aaKnown RBP11.62□□□□□ -0.55
ERCC3-201ENST00000285398 PAK1Q13153 545 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 SNCBQ16143 134 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 EPSTI1Q96J88 318 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 LRRC1Q9BTT6 524 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 TSGA10Q9BZW7 698 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 CENPHQ9H3R5 247 aa11.62□□□□□ -0.55
ERCC3-201ENST00000285398 ZNHIT6Q9NWK9 470 aaKnown RBP11.62□□□□□ -0.55
ERCC3-201ENST00000285398 BAZ2BQ9UIF8 2168 aaKnown RBP11.61□□□□□ -0.55
ERCC3-201ENST00000285398 A0A1B0GUA9 196 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 KIF3CO14782 793 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 DEXIO95424 95 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 TNFRSF8P28908 595 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 ATP1A2P50993 1020 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 TNIP1Q15025 636 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 PPP2R5AQ15172 486 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 C9orf131Q5VYM1 1079 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 CCDC170Q8IYT3 715 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 MAGEC3Q8TD91 643 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 DNAJC18Q9H819 358 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 IL17RBQ9NRM6 502 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 STIM2Q9P246 746 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 DMGDHQ9UI17 866 aaKnown RBP11.61□□□□□ -0.55
ERCC3-201ENST00000285398 HDAC9Q9UKV0 1011 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 CAPN11Q9UMQ6 739 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 STX8Q9UNK0 236 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 ARFGEF1Q9Y6D6 1849 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 A0A1W2PQC6 194 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 PRLRP16471 622 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 RASA1P20936 1047 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 EPS15P42566 896 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 VAV2P52735 878 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 KIF5AQ12840 1032 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 WTAPQ15007 396 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 RTN1Q16799 776 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 RRAGBQ5VZM2 374 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 MIGA2Q7L4E1 593 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 CREG2Q8IUH2 290 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 AGBL3Q8NEM8 1001 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 SPATA4Q8NEY3 305 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 TRIM58Q8NG06 486 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 OXER1Q8TDS5 423 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 SYMPKQ92797 1274 aaKnown RBP11.61□□□□□ -0.55
ERCC3-201ENST00000285398 ZSCAN10Q96SZ4 725 aaPredicted RBP11.61□□□□□ -0.55
ERCC3-201ENST00000285398 SLC40A1Q9NP59 571 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 ZNF70Q9UC06 446 aaPredicted RBP11.61□□□□□ -0.55
ERCC3-201ENST00000285398 SNX12Q9UMY4 172 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 FZD1Q9UP38 647 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 LTBP3Q9NS15 1303 aa11.61□□□□□ -0.55
ERCC3-201ENST00000285398 TIAM2Q8IVF5 1701 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 TRIM75PA6NK02 468 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 FAM107AO95990 144 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 TSPY3P0CV98 308 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 TSPY8P0CW00 308 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms