RNA–Protein interactions for RNA: ENST00000283351.8

TRAPPC8-201, Transcript of trafficking protein particle complex 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC8, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-201ENST00000283351 SOX5P35711 763 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 HUNKP57058 714 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 FBXW4P57775 412 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 MESDQ14696 234 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 IFT122Q9HBG6 1241 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 BUB1BO60566 1050 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 PDE1BQ01064 536 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 ANKRD20A3Q5VUR7 823 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 TBC1D9BQ66K14 1250 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 PNMA8AQ86V59 439 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 FAM186BQ8IYM0 893 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 CDKL2Q92772 493 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 DENND2CQ68D51 928 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 PODNQ7Z5L7 613 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 MICALL2Q8IY33 904 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 SSH3Q8TE77 659 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 RPGRIP1Q96KN7 1286 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 TLR7Q9NYK1 1049 aaKnown RBP16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 NLRP1Q9C000 1473 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 SGK1O00141 431 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 CPB1P15086 417 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 PSMC2P35998 433 aaKnown RBP16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 GARSP41250 739 aaKnown RBP16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 TOPORSQ9NS56 1045 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 MED7O43513 233 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 GAP43P17677 238 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 RNF146Q9NTX7 359 aa16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 DBNLQ9UJU6 430 aaKnown RBP16.04■□□□□ 0.16
TRAPPC8-201ENST00000283351 KRIT1O00522 736 aa16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 TCP11Q8WWU5 503 aa16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 CALN1Q9BXU9 219 aa16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 KCNQ2O43526 872 aa16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 NBPF11Q86T75 865 aa16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 SH3RF3Q8TEJ3 882 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 KRT3P12035 628 aa16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 LONP1P36776 959 aaKnown RBP16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 RAB44Q7Z6P3 723 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 RAB17Q9H0T7 212 aa16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 RABEP2Q9H5N1 569 aa16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 ADKP55263 362 aaKnown RBP16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 CCDC170Q8IYT3 715 aa16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 ZFYVE28Q9HCC9 887 aa16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 TSKSQ9UJT2 592 aa16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 NEO1Q92859 1461 aa16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 MTMR1Q13613 665 aa16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 THOC5Q13769 683 aaKnown RBP16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 LLGL1Q15334 1064 aa16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 HLFQ16534 295 aa16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 CLEC4GQ6UXB4 293 aa16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 COPRSQ9NQ92 184 aa16.03■□□□□ 0.16
TRAPPC8-201ENST00000283351 TFRCP02786 760 aaKnown RBP16.02■□□□□ 0.16
TRAPPC8-201ENST00000283351 FOXD4Q12950 439 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC8-201ENST00000283351 NAA35Q5VZE5 725 aa16.02■□□□□ 0.16
TRAPPC8-201ENST00000283351 HDXQ7Z353 690 aa16.02■□□□□ 0.16
TRAPPC8-201ENST00000283351 TMEM206Q9H813 350 aa16.02■□□□□ 0.16
TRAPPC8-201ENST00000283351 HEG1Q9ULI3 1381 aa16.02■□□□□ 0.16
TRAPPC8-201ENST00000283351 CYP2B6P20813 491 aa16.02■□□□□ 0.16
TRAPPC8-201ENST00000283351 IL1RL1Q01638 556 aa16.02■□□□□ 0.16
TRAPPC8-201ENST00000283351 CDO1Q16878 200 aa16.02■□□□□ 0.16
TRAPPC8-201ENST00000283351 UHMK1Q8TAS1 419 aaKnown RBP16.02■□□□□ 0.16
TRAPPC8-201ENST00000283351 GTPBP6O43824 516 aaPredicted RBP16.02■□□□□ 0.15
TRAPPC8-201ENST00000283351 H2AFZP0C0S5 128 aa16.02■□□□□ 0.15
TRAPPC8-201ENST00000283351 ARL13BQ3SXY8 428 aa16.02■□□□□ 0.15
TRAPPC8-201ENST00000283351 ACBD5Q5T8D3 534 aaPredicted RBP16.02■□□□□ 0.15
TRAPPC8-201ENST00000283351 H2AFVQ71UI9 128 aa16.02■□□□□ 0.15
TRAPPC8-201ENST00000283351 NVLO15381 856 aaKnown RBP16.02■□□□□ 0.15
TRAPPC8-201ENST00000283351 GCFC2P16383 781 aaKnown RBP16.02■□□□□ 0.15
TRAPPC8-201ENST00000283351 CCDC157Q569K6 752 aa16.02■□□□□ 0.15
TRAPPC8-201ENST00000283351 TEX2Q8IWB9 1127 aa16.02■□□□□ 0.15
TRAPPC8-201ENST00000283351 EFCC1Q9HA90 598 aa16.02■□□□□ 0.15
TRAPPC8-201ENST00000283351 FAM8A1Q9UBU6 413 aa16.02■□□□□ 0.15
TRAPPC8-201ENST00000283351 ARHGAP6O43182 974 aa16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 PMLP29590 882 aa16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 SEPT2Q15019 361 aa16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 DPF3Q92784 378 aa16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 SPATA33Q96N06 139 aa16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 CELF2O95319 508 aaKnown RBP16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 KRT71Q3SY84 523 aa16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 DNAJC24Q6P3W2 148 aa16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 DPH5Q9H2P9 285 aa16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 CNOT7Q9UIV1 285 aaKnown RBP16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 FARP1Q9Y4F1 1045 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 PEX3P56589 373 aa16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 GPC4O75487 556 aa16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 PHKA2P46019 1235 aa16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 CBX8Q9HC52 389 aa16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 MAST1Q9Y2H9 1570 aa16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 HUS1O60921 280 aa16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 C6orf222P0C671 652 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 HMGCS2P54868 508 aa16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 PAK2Q13177 524 aa16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 RHPN2Q8IUC4 686 aa16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC8-201ENST00000283351 TUBBP07437 444 aa16■□□□□ 0.15
TRAPPC8-201ENST00000283351 ATF2P15336 505 aa16■□□□□ 0.15
TRAPPC8-201ENST00000283351 ADD2P35612 726 aa16■□□□□ 0.15
TRAPPC8-201ENST00000283351 FAM71BQ8TC56 605 aa16■□□□□ 0.15
TRAPPC8-201ENST00000283351 NSUN6Q8TEA1 469 aaKnown RBP16■□□□□ 0.15
TRAPPC8-201ENST00000283351 VCX3BQ9H321 246 aa16■□□□□ 0.15
TRAPPC8-201ENST00000283351 CARMIL3Q8ND23 1372 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms