RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 PRKG1Q13976 671 aa13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 MAN2A1Q16706 1144 aa13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 KCTD19Q17RG1 926 aaPredicted RBP13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 HAUS3Q68CZ6 603 aa13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 HDXQ7Z353 690 aa13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 FAM133AQ8N9E0 248 aa13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 LACRTQ9GZZ8 138 aa13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 SEMA6BQ9H3T3 888 aa13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 EMILIN3Q9NT22 766 aa13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 GOLGB1Q14789 3259 aaKnown RBP13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 BMP3P12645 472 aa13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 SFMBT2Q5VUG0 894 aa13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 KIAA0895Q8NCT3 520 aa13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 DOT1LQ8TEK3 1739 aa13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 FTCDO95954 541 aa13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 KIF11P52732 1056 aa13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 KCNB1Q14721 858 aa13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 SLC9C1Q4G0N8 1177 aa13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 CCDC17Q96LX7 622 aa13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 NT5C3AQ9H0P0 336 aa13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 STK17AQ9UEE5 414 aa13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 MKRN1Q9UHC7 482 aaKnown RBP13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 MORC2Q9Y6X9 1032 aaPredicted RBP13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 FANCGO15287 622 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 PPP1R12BO60237 982 aaPredicted RBP13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 MYCLP12524 364 aaPredicted RBP13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 ARHGAP4P98171 946 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 FKBP3Q00688 224 aaKnown RBP13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 CKAP4Q07065 602 aaKnown RBP13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 UTP14CQ5TAP6 766 aaKnown RBP13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 IQCEQ6IPM2 695 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 TBC1D5Q92609 795 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 DUSP9Q99956 384 aaKnown RBP13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 ADAMTS1Q9UHI8 967 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 COL14A1Q05707 1796 aaKnown RBP13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 CAPN2P17655 700 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 SHMT1P34896 483 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 ARHGAP44Q17R89 818 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 IRF2BP1Q8IU81 584 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 KLHL7Q8IXQ5 586 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 EHD2Q9NZN4 543 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 GLI3P10071 1580 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 KLRC4O43908 158 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 PRPHP41219 470 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 VSNL1P62760 191 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 FAM83BQ5T0W9 1011 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 PACSIN2Q9UNF0 486 aaPredicted RBP13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 COL4A3BPQ9Y5P4 624 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 MYH13Q9UKX3 1938 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 TMEM110-MUSTN1A8MSY1 372 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 NKRFO15226 690 aaKnown RBP eCLIP13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 SRGNP10124 158 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 WHAMMP3Q1A5X7 153 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 SYDE2Q5VT97 1194 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 KSR1Q8IVT5 923 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 CYP2W1Q8TAV3 490 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 MMS19Q96T76 1030 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 ARHGEF10LQ9HCE6 1279 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 RIC8AQ9NPQ8 531 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 HDAC9Q9UKV0 1011 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 CAPN11Q9UMQ6 739 aa13.1□□□□□ -0.31
SLC13A3-201ENST00000279027 NDUFB10O96000 172 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 GABPB1Q06547 395 aaPredicted RBP13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 TERF2Q15554 542 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 ASIC2Q16515 512 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 MAP9Q49MG5 647 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 CCDC93Q567U6 631 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 SFR1Q86XK3 245 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 LRRC15Q8TF66 581 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 PNMA5Q96PV4 448 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 C7orf25Q9BPX7 421 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 PCDHA13Q9Y5I0 950 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 GAS7O60861 476 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 PPP1R2P41236 205 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 ECE1P42892 770 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 EHHADHQ08426 723 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 KIAA0753Q2KHM9 967 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 ZFYVE27Q5T4F4 411 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 NSMFQ6X4W1 530 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 SND1Q7KZF4 910 aaKnown RBP eCLIP13.09□□□□□ -0.311e-7■□□□□ 9.2
SLC13A3-201ENST00000279027 PNKPQ96T60 521 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 ZNF277Q9NRM2 450 aaPredicted RBP13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 ARMCX3Q9UH62 379 aaPredicted RBP13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 MYL1P05976 194 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 ABCB4P21439 1286 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 CEP89Q96ST8 783 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 MAGEF1Q9HAY2 307 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 BLOC1S4Q9NUP1 217 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 GJA3Q9Y6H8 435 aa13.09□□□□□ -0.31
SLC13A3-201ENST00000279027 PDS5AQ29RF7 1337 aaKnown RBP13.08□□□□□ -0.32
SLC13A3-201ENST00000279027 ACTN1P12814 892 aa13.08□□□□□ -0.32
SLC13A3-201ENST00000279027 ALAS1P13196 640 aa13.08□□□□□ -0.32
SLC13A3-201ENST00000279027 LLGL1Q15334 1064 aa13.08□□□□□ -0.32
SLC13A3-201ENST00000279027 NFRKBQ6P4R8 1299 aa13.08□□□□□ -0.32
SLC13A3-201ENST00000279027 APTXQ7Z2E3 356 aaKnown RBP13.08□□□□□ -0.32
SLC13A3-201ENST00000279027 PODNQ7Z5L7 613 aa13.08□□□□□ -0.32
SLC13A3-201ENST00000279027 ADAT2Q7Z6V5 191 aaKnown RBP13.08□□□□□ -0.32
SLC13A3-201ENST00000279027 DAGLBQ8NCG7 672 aa13.08□□□□□ -0.32
SLC13A3-201ENST00000279027 MMTAG2Q9BU76 263 aaKnown RBP13.08□□□□□ -0.32
SLC13A3-201ENST00000279027 RIOX1Q9H6W3 641 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms