RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 GSPT1P15170 499 aaKnown RBP10.48□□□□□ -0.73
TPM3-201ENST00000271850 ATP2A2P16615 1042 aaKnown RBP10.48□□□□□ -0.73
TPM3-201ENST00000271850 GHRHRQ02643 423 aa10.48□□□□□ -0.73
TPM3-201ENST00000271850 SEC23AQ15436 765 aa10.48□□□□□ -0.73
TPM3-201ENST00000271850 CYB5R4Q7L1T6 521 aa10.48□□□□□ -0.73
TPM3-201ENST00000271850 TMCO2Q7Z6W1 182 aaPredicted RBP10.48□□□□□ -0.73
TPM3-201ENST00000271850 MTMR8Q96EF0 704 aa10.48□□□□□ -0.73
TPM3-201ENST00000271850 ASB2Q96Q27 587 aa10.48□□□□□ -0.73
TPM3-201ENST00000271850 ZSCAN10Q96SZ4 725 aaPredicted RBP10.48□□□□□ -0.73
TPM3-201ENST00000271850 PCDHA11Q9Y5I1 949 aa10.48□□□□□ -0.73
TPM3-201ENST00000271850 COL4A4P53420 1690 aaPredicted RBP10.47□□□□□ -0.73
TPM3-201ENST00000271850 LCHNA4D1U4 455 aa10.47□□□□□ -0.73
TPM3-201ENST00000271850 ZNF213O14771 459 aa10.47□□□□□ -0.73
TPM3-201ENST00000271850 LPXNO60711 386 aa10.47□□□□□ -0.73
TPM3-201ENST00000271850 SUPT20HL2P0C7V6 817 aa10.47□□□□□ -0.73
TPM3-201ENST00000271850 IGFBP4P22692 258 aa10.47□□□□□ -0.73
TPM3-201ENST00000271850 TFF2Q03403 129 aa10.47□□□□□ -0.73
TPM3-201ENST00000271850 COL9A3Q14050 684 aaPredicted RBP10.47□□□□□ -0.73
TPM3-201ENST00000271850 TRIM71Q2Q1W2 868 aaKnown RBP10.47□□□□□ -0.73
TPM3-201ENST00000271850 FAM47CQ5HY64 1035 aa10.47□□□□□ -0.73
TPM3-201ENST00000271850 PPP2R2DQ66LE6 453 aa10.47□□□□□ -0.73
TPM3-201ENST00000271850 SEPT14Q6ZU15 432 aa10.47□□□□□ -0.73
TPM3-201ENST00000271850 SESTD1Q86VW0 696 aa10.47□□□□□ -0.73
TPM3-201ENST00000271850 RPUSD2Q8IZ73 545 aaKnown RBP10.47□□□□□ -0.73
TPM3-201ENST00000271850 IL31RAQ8NI17 732 aa10.47□□□□□ -0.73
TPM3-201ENST00000271850 GPKOWQ92917 476 aaPredicted RBP eCLIP10.47□□□□□ -0.731e-12■□□□□ 9.1
TPM3-201ENST00000271850 NECAB3Q96P71 396 aaPredicted RBP10.47□□□□□ -0.73
TPM3-201ENST00000271850 DSCC1Q9BVC3 393 aa10.47□□□□□ -0.73
TPM3-201ENST00000271850 RNF41Q9H4P4 317 aaPredicted RBP10.47□□□□□ -0.73
TPM3-201ENST00000271850 BCAS3Q9H6U6 928 aa10.47□□□□□ -0.73
TPM3-201ENST00000271850 CERS4Q9HA82 394 aa10.47□□□□□ -0.73
TPM3-201ENST00000271850 SLC28A3Q9HAS3 691 aa10.47□□□□□ -0.73
TPM3-201ENST00000271850 THEGQ9P2T0 379 aa10.47□□□□□ -0.73
TPM3-201ENST00000271850 RAPGEFL1Q9UHV5 662 aa10.47□□□□□ -0.73
TPM3-201ENST00000271850 MAD2L2Q9UI95 211 aa10.47□□□□□ -0.73
TPM3-201ENST00000271850 DDX41Q9UJV9 622 aaKnown RBP10.47□□□□□ -0.73
TPM3-201ENST00000271850 MTCH2Q9Y6C9 303 aa10.47□□□□□ -0.73
TPM3-201ENST00000271850 ABCB11O95342 1321 aa10.47□□□□□ -0.73
TPM3-201ENST00000271850 HAS3O00219 553 aa10.46□□□□□ -0.73
TPM3-201ENST00000271850 NBNO60934 754 aa10.46□□□□□ -0.73
TPM3-201ENST00000271850 PFKMP08237 780 aa10.46□□□□□ -0.73
TPM3-201ENST00000271850 HOXD8P13378 290 aaPredicted RBP10.46□□□□□ -0.73
TPM3-201ENST00000271850 EIF2AK2P19525 551 aaKnown RBP10.46□□□□□ -0.73
TPM3-201ENST00000271850 HSD17B4P51659 736 aa10.46□□□□□ -0.73
TPM3-201ENST00000271850 DEFB103AP81534 67 aa10.46□□□□□ -0.73
TPM3-201ENST00000271850 ZNF200P98182 395 aaPredicted RBP10.46□□□□□ -0.73
TPM3-201ENST00000271850 SP2Q02086 613 aa10.46□□□□□ -0.73
TPM3-201ENST00000271850 TAP1Q03518 808 aa10.46□□□□□ -0.73
TPM3-201ENST00000271850 PTPN11Q06124 597 aaPredicted RBP10.46□□□□□ -0.73
TPM3-201ENST00000271850 RBL2Q08999 1139 aa10.46□□□□□ -0.73
TPM3-201ENST00000271850 MBTPS1Q14703 1052 aa10.46□□□□□ -0.73
TPM3-201ENST00000271850 ASPRV1Q53RT3 343 aa10.46□□□□□ -0.73
TPM3-201ENST00000271850 HS6ST3Q8IZP7 471 aa10.46□□□□□ -0.73
TPM3-201ENST00000271850 ATXN2LQ8WWM7 1075 aaKnown RBP10.46□□□□□ -0.73
TPM3-201ENST00000271850 SYMPKQ92797 1274 aaKnown RBP10.46□□□□□ -0.73
TPM3-201ENST00000271850 RMDN3Q96TC7 470 aa10.46□□□□□ -0.73
TPM3-201ENST00000271850 OSBPL7Q9BZF2 842 aa10.46□□□□□ -0.73
TPM3-201ENST00000271850 MTIF3Q9H2K0 278 aaKnown RBP10.46□□□□□ -0.73
TPM3-201ENST00000271850 KAT14Q9H8E8 782 aa10.46□□□□□ -0.73
TPM3-201ENST00000271850 PXMP2Q9NR77 195 aa10.46□□□□□ -0.73
TPM3-201ENST00000271850 TELO2Q9Y4R8 837 aa10.46□□□□□ -0.73
TPM3-201ENST00000271850 MYH6P13533 1939 aa10.46□□□□□ -0.74
TPM3-201ENST00000271850 BRWD1Q9NSI6 2320 aa10.46□□□□□ -0.74
TPM3-201ENST00000271850 TCF20Q9UGU0 1960 aaKnown RBP10.45□□□□□ -0.74
TPM3-201ENST00000271850 PALM3A6NDB9 673 aaPredicted RBP10.45□□□□□ -0.74
TPM3-201ENST00000271850 TNFRSF10AO00220 468 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 CYTH3O43739 400 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 GH1P01241 217 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 CXCL10P02778 98 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 ZNF286BP0CG31 522 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 BMP1P13497 986 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 POU3F3P20264 500 aaPredicted RBP10.45□□□□□ -0.74
TPM3-201ENST00000271850 RFC2P35250 354 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 KCNQ1P51787 676 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 WDR5P61964 334 aaKnown RBP10.45□□□□□ -0.74
TPM3-201ENST00000271850 PTH1RQ03431 593 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 PTGISQ16647 500 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 STOX1Q6ZVD7 989 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 CHST3Q7LGC8 479 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 IQCA1Q86XH1 822 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 FBXO11Q86XK2 927 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 HERC6Q8IVU3 1022 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 ADAMTS19Q8TE59 1207 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 NSUN6Q8TEA1 469 aaKnown RBP10.45□□□□□ -0.74
TPM3-201ENST00000271850 EMID1Q96A84 441 aaPredicted RBP10.45□□□□□ -0.74
TPM3-201ENST00000271850 SLC9A7Q96T83 725 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 PDCD2LQ9BRP1 358 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 RWDD1Q9H446 243 aaPredicted RBP10.45□□□□□ -0.74
TPM3-201ENST00000271850 VAT1LQ9HCJ6 419 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 HDAC6Q9UBN7 1215 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 GTF2IRD1Q9UHL9 959 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 PNMA2Q9UL42 364 aa10.45□□□□□ -0.74
TPM3-201ENST00000271850 BAZ2BQ9UIF8 2168 aaKnown RBP10.45□□□□□ -0.74
TPM3-201ENST00000271850 RAD50Q92878 1312 aa10.44□□□□□ -0.74
TPM3-201ENST00000271850 SORBS3O60504 671 aa10.44□□□□□ -0.74
TPM3-201ENST00000271850 KPNA6O60684 536 aa10.44□□□□□ -0.74
TPM3-201ENST00000271850 F2P00734 622 aa10.44□□□□□ -0.74
TPM3-201ENST00000271850 NR3C2P08235 984 aa10.44□□□□□ -0.74
TPM3-201ENST00000271850 PARP1P09874 1014 aaKnown RBP10.44□□□□□ -0.74
TPM3-201ENST00000271850 CHMP4BP1P59074 171 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms