RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 MDM2Q00987 491 aaPredicted RBP12.04□□□□□ -0.48
CHFR-201ENST00000266880 CASP8Q14790 479 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 TTC1Q99614 292 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 PMLP29590 882 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 SLC44A4Q53GD3 710 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 AZI2Q9H6S1 392 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 TLK1Q9UKI8 766 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 NFU1Q9UMS0 254 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 ATP8B1O43520 1251 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 HADHAP40939 763 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 PCGF5Q86SE9 256 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 C17orf50Q8WW18 174 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 EHD2Q9NZN4 543 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 ARAP1Q96P48 1450 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 SPOUT1Q5T280 376 aaKnown RBP12.04□□□□□ -0.48
CHFR-201ENST00000266880 ANO5Q75V66 913 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 PPM1KQ8N3J5 372 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 ABCB6Q9NP58 842 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 HSPA4LO95757 839 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 B4GALNT2Q8NHY0 566 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 KDM3AQ9Y4C1 1321 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 SEC24DO94855 1032 aaPredicted RBP12.03□□□□□ -0.48
CHFR-201ENST00000266880 PYGBP11216 843 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 DARS2Q6PI48 645 aaKnown RBP12.03□□□□□ -0.48
CHFR-201ENST00000266880 DNAAF3Q8N9W5 541 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 TEX12Q9BXU0 123 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 TMPRSS15P98073 1019 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 PPHLN1Q8NEY8 458 aaKnown RBP12.03□□□□□ -0.48
CHFR-201ENST00000266880 FAM161BQ96MY7 647 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 ARHGEF10LQ9HCE6 1279 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 PICK1Q9NRD5 415 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 DISC1Q9NRI5 854 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 NIP7Q9Y221 180 aaKnown RBP eCLIP12.03□□□□□ -0.48
CHFR-201ENST00000266880 SOWAHDA6NJG2 315 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 OCM2P0CE71 109 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 OCMP0CE72 109 aaPredicted RBP12.03□□□□□ -0.48
CHFR-201ENST00000266880 ATP2B4P23634 1241 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 NAIF1Q69YI7 327 aaPredicted RBP12.03□□□□□ -0.48
CHFR-201ENST00000266880 DEPTORQ8TB45 409 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 EEF2KMTQ96G04 330 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 EDEM3Q9BZQ6 932 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 MAPK4P31152 587 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 MIS12Q9H081 205 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 EPRSP07814 1512 aaKnown RBP12.03□□□□□ -0.48
CHFR-201ENST00000266880 EPHB1P54762 984 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 LZICQ8WZA0 190 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 PPP1R14BQ96C90 147 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 DCTPP1Q9H773 170 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 KIF14Q15058 1648 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 CA4P22748 312 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 MAP4P27816 1152 aaKnown RBP12.03□□□□□ -0.48
CHFR-201ENST00000266880 AATFQ9NY61 560 aaKnown RBP eCLIP12.03□□□□□ -0.48
CHFR-201ENST00000266880 RNF103-CHMP3A0A140T963 221 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 TNNC2P02585 160 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 KPNA2P52292 529 aaKnown RBP12.03□□□□□ -0.48
CHFR-201ENST00000266880 ARHGAP18Q8N392 663 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.03□□□□□ -0.48
CHFR-201ENST00000266880 PI4K2BG5E9Z4 385 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 FBLN1P23142 703 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 CLIC6Q96NY7 704 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 PITPNM3Q9BZ71 974 aa12.03□□□□□ -0.48
CHFR-201ENST00000266880 GPHNQ9NQX3 736 aaPredicted RBP12.03□□□□□ -0.48
CHFR-201ENST00000266880 KAT6AQ92794 2004 aa12.02□□□□□ -0.48
CHFR-201ENST00000266880 ORC4O43929 436 aa12.02□□□□□ -0.48
CHFR-201ENST00000266880 AFPP02771 609 aaKnown RBP12.02□□□□□ -0.48
CHFR-201ENST00000266880 TECP42680 631 aa12.02□□□□□ -0.48
CHFR-201ENST00000266880 GSPT2Q8IYD1 628 aaKnown RBP12.02□□□□□ -0.48
CHFR-201ENST00000266880 TTC17Q96AE7 1141 aa12.02□□□□□ -0.48
CHFR-201ENST00000266880 CAB39Q9Y376 341 aaPredicted RBP12.02□□□□□ -0.48
CHFR-201ENST00000266880 ATP5HO75947 161 aa12.02□□□□□ -0.48
CHFR-201ENST00000266880 NUGGCQ68CJ6 796 aa12.02□□□□□ -0.48
CHFR-201ENST00000266880 FGD5Q6ZNL6 1462 aa12.02□□□□□ -0.48
CHFR-201ENST00000266880 NSD2O96028 1365 aa12.02□□□□□ -0.48
CHFR-201ENST00000266880 TSPAN9O75954 239 aa12.02□□□□□ -0.49
CHFR-201ENST00000266880 KCTD6Q8NC69 237 aa12.02□□□□□ -0.49
CHFR-201ENST00000266880 NEK9Q8TD19 979 aa12.02□□□□□ -0.49
CHFR-201ENST00000266880 FMO2Q99518 471 aa12.02□□□□□ -0.49
CHFR-201ENST00000266880 NFKBIL1Q9UBC1 381 aaPredicted RBP12.02□□□□□ -0.49
CHFR-201ENST00000266880 SPARCL1Q14515 664 aa12.02□□□□□ -0.49
CHFR-201ENST00000266880 PLEKHM3Q6ZWE6 761 aa12.02□□□□□ -0.49
CHFR-201ENST00000266880 SIX5Q8N196 739 aa12.02□□□□□ -0.49
CHFR-201ENST00000266880 FBXO18Q8NFZ0 1043 aa12.02□□□□□ -0.49
CHFR-201ENST00000266880 DIAPH2O60879 1101 aa12.02□□□□□ -0.49
CHFR-201ENST00000266880 CCDC127Q96BQ5 260 aa12.02□□□□□ -0.49
CHFR-201ENST00000266880 ADNPQ9H2P0 1102 aa12.02□□□□□ -0.49
CHFR-201ENST00000266880 ZBTB24O43167 697 aaPredicted RBP12.02□□□□□ -0.49
CHFR-201ENST00000266880 GPAA1O43292 621 aa12.02□□□□□ -0.49
CHFR-201ENST00000266880 NSUN2Q08J23 767 aaKnown RBP eCLIP12.02□□□□□ -0.49
CHFR-201ENST00000266880 NANOGNBQ7Z5D8 188 aa12.02□□□□□ -0.49
CHFR-201ENST00000266880 SLC38A10Q9HBR0 1119 aa12.02□□□□□ -0.49
CHFR-201ENST00000266880 RBL2Q08999 1139 aa12.02□□□□□ -0.49
CHFR-201ENST00000266880 CCDC80Q76M96 950 aa12.02□□□□□ -0.49
CHFR-201ENST00000266880 GET4Q7L5D6 327 aaPredicted RBP12.02□□□□□ -0.49
CHFR-201ENST00000266880 DR1Q01658 176 aa12.02□□□□□ -0.49
CHFR-201ENST00000266880 TBL3Q12788 808 aaKnown RBP12.02□□□□□ -0.49
CHFR-201ENST00000266880 THOC5Q13769 683 aaKnown RBP12.02□□□□□ -0.49
CHFR-201ENST00000266880 TERF2Q15554 542 aa12.02□□□□□ -0.49
CHFR-201ENST00000266880 CCDC142Q17RM4 750 aa12.01□□□□□ -0.49
CHFR-201ENST00000266880 DCTN4Q9UJW0 460 aa12.01□□□□□ -0.49
CHFR-201ENST00000266880 FOSL2P15408 326 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms