RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 TUBB2AQ13885 445 aa14.34□□□□□ -0.11
CPSF6-201ENST00000266679 SLFN13Q68D06 897 aa14.34□□□□□ -0.11
CPSF6-201ENST00000266679 USP17L6PQ6QN14 398 aa14.34□□□□□ -0.11
CPSF6-201ENST00000266679 RETREG2Q8NC44 543 aa14.34□□□□□ -0.11
CPSF6-201ENST00000266679 CCDC17Q96LX7 622 aa14.34□□□□□ -0.11
CPSF6-201ENST00000266679 TUBB2BQ9BVA1 445 aa14.34□□□□□ -0.11
CPSF6-201ENST00000266679 TRIM34Q9BYJ4 488 aa14.34□□□□□ -0.11
CPSF6-201ENST00000266679 CYLC1P35663 651 aaPredicted RBP14.34□□□□□ -0.11
CPSF6-201ENST00000266679 SLC1A4P43007 532 aa14.34□□□□□ -0.11
CPSF6-201ENST00000266679 SNAP25P60880 206 aa14.34□□□□□ -0.11
CPSF6-201ENST00000266679 CDC37Q16543 378 aaPredicted RBP14.34□□□□□ -0.11
CPSF6-201ENST00000266679 CERKLQ49MI3 558 aaPredicted RBP14.34□□□□□ -0.11
CPSF6-201ENST00000266679 VWA3BQ502W6 1294 aa14.34□□□□□ -0.11
CPSF6-201ENST00000266679 CCDC122Q5T0U0 273 aa14.34□□□□□ -0.11
CPSF6-201ENST00000266679 RTKN2Q8IZC4 609 aa14.34□□□□□ -0.11
CPSF6-201ENST00000266679 GUF1Q8N442 669 aaKnown RBP14.34□□□□□ -0.11
CPSF6-201ENST00000266679 JAKMIP2Q96AA8 810 aa14.34□□□□□ -0.11
CPSF6-201ENST00000266679 ERGIC2Q96RQ1 377 aa14.34□□□□□ -0.11
CPSF6-201ENST00000266679 NHEJ1Q9H9Q4 299 aaPredicted RBP14.34□□□□□ -0.11
CPSF6-201ENST00000266679 FAM198AQ9UFP1 575 aa14.34□□□□□ -0.11
CPSF6-201ENST00000266679 PRDM4Q9UKN5 801 aa14.34□□□□□ -0.11
CPSF6-201ENST00000266679 SCN4AP35499 1836 aa14.34□□□□□ -0.11
CPSF6-201ENST00000266679 SASH3O75995 380 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 GCFC2P16383 781 aaKnown RBP14.33□□□□□ -0.12
CPSF6-201ENST00000266679 ERCC3P19447 782 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 COASYQ13057 564 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 SEPT2Q15019 361 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 WHAMMP3Q1A5X7 153 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 SH3BP5LQ7L8J4 393 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 SMC1BQ8NDV3 1235 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 DCAF4Q8WV16 495 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 LRRC27Q9C0I9 530 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 HAUS4Q9H6D7 363 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 ANKZF1Q9H8Y5 726 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 PCDHA1Q9Y5I3 950 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 ECE2O60344 883 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 GDF11O95390 407 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 TBC1D8O95759 1140 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 KRT83P78385 493 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 FSTL1Q12841 308 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 PODNQ7Z5L7 613 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 GPIHBP1Q8IV16 184 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 TSG101Q99816 390 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 ANO3Q9BYT9 981 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 ARFGAP3Q9NP61 516 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 ZHX1Q9UKY1 873 aaPredicted RBP14.33□□□□□ -0.12
CPSF6-201ENST00000266679 MYO6Q9UM54 1294 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 PCDHA12Q9UN75 941 aa14.33□□□□□ -0.12
CPSF6-201ENST00000266679 ENC1O14682 589 aa14.32□□□□□ -0.12
CPSF6-201ENST00000266679 AMPD2Q01433 879 aa14.32□□□□□ -0.12
CPSF6-201ENST00000266679 EHHADHQ08426 723 aa14.32□□□□□ -0.12
CPSF6-201ENST00000266679 MAN2A1Q16706 1144 aa14.32□□□□□ -0.12
CPSF6-201ENST00000266679 NCAPH2Q6IBW4 605 aa14.32□□□□□ -0.12
CPSF6-201ENST00000266679 ZNF771Q7L3S4 317 aaPredicted RBP14.32□□□□□ -0.12
CPSF6-201ENST00000266679 NDST4Q9H3R1 872 aa14.32□□□□□ -0.12
CPSF6-201ENST00000266679 FAM207AQ9NSI2 230 aaPredicted RBP14.32□□□□□ -0.12
CPSF6-201ENST00000266679 TBC1D7Q9P0N9 293 aa14.32□□□□□ -0.12
CPSF6-201ENST00000266679 KDM3AQ9Y4C1 1321 aa14.32□□□□□ -0.12
CPSF6-201ENST00000266679 A0A1W2PQJ5 194 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 POTEB3A0JP26 581 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 CTAGE15A4D2H0 777 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 RCCD1A6NED2 376 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 E9PMD0 336 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 EPHB6O15197 1021 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 IPO7O95373 1038 aaKnown RBP14.31□□□□□ -0.12
CPSF6-201ENST00000266679 FGFR1OPO95684 399 aaKnown RBP14.31□□□□□ -0.12
CPSF6-201ENST00000266679 RHOXF2BP0C7M4 288 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 CTAGE8P0CG41 777 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 STAT3P40763 770 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 ICA1Q05084 483 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 LRRC63Q05C16 580 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 DACT2Q5SW24 774 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 POTEBQ6S5H4 581 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 LRRC55Q6ZSA7 311 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 CTAGE6Q86UF2 777 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 CTAGE4Q8IX94 777 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 DNAJC19Q96DA6 116 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 PNKPQ96T60 521 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 NAP1L4Q99733 375 aaKnown RBP14.31□□□□□ -0.12
CPSF6-201ENST00000266679 RHOXF2Q9BQY4 288 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 DHX36Q9H2U1 1008 aaKnown RBP14.31□□□□□ -0.12
CPSF6-201ENST00000266679 PANK4Q9NVE7 773 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 NYAP2Q9P242 653 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 HDAC6Q9UBN7 1215 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 KIAA1024Q9UPX6 916 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 SIK3Q9Y2K2 1263 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 NPHP3-ACAD11A0A0J9YXS1 232 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 EIF3CLB5ME19 914 aaKnown RBP14.31□□□□□ -0.12
CPSF6-201ENST00000266679 ATP1A1P05023 1023 aaKnown RBP14.31□□□□□ -0.12
CPSF6-201ENST00000266679 PLEKP08567 350 aaPredicted RBP14.31□□□□□ -0.12
CPSF6-201ENST00000266679 TAL1P17542 331 aaPredicted RBP14.31□□□□□ -0.12
CPSF6-201ENST00000266679 CYP27A1Q02318 531 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 CACNB1Q02641 598 aaPredicted RBP14.31□□□□□ -0.12
CPSF6-201ENST00000266679 PSMD2Q13200 908 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 FIGNQ5HY92 759 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 CCDC170Q8IYT3 715 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 MYOCDQ8IZQ8 938 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 DNAJC5GQ8N7S2 189 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 PSMD1Q99460 953 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 EIF3CQ99613 913 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms