RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 PAFAH1B1P43034 410 aa18.57■□□□□ 0.56
SQLE-201ENST00000265896 AARSP49588 968 aaKnown RBP eCLIP18.57■□□□□ 0.56
SQLE-201ENST00000265896 FBXW10Q5XX13 1052 aa18.57■□□□□ 0.56
SQLE-201ENST00000265896 KIAA1024Q9UPX6 916 aa18.57■□□□□ 0.56
SQLE-201ENST00000265896 A0A087X0T9 212 aa18.56■□□□□ 0.56
SQLE-201ENST00000265896 POTEB3A0JP26 581 aa18.56■□□□□ 0.56
SQLE-201ENST00000265896 POTECB2RU33 542 aa18.56■□□□□ 0.56
SQLE-201ENST00000265896 PPFIA4O75335 1185 aa18.56■□□□□ 0.56
SQLE-201ENST00000265896 FAM228BP0C875 321 aa18.56■□□□□ 0.56
SQLE-201ENST00000265896 MAN2A1Q16706 1144 aa18.56■□□□□ 0.56
SQLE-201ENST00000265896 KIAA0753Q2KHM9 967 aa18.56■□□□□ 0.56
SQLE-201ENST00000265896 MFSD14BQ5SR56 506 aa18.56■□□□□ 0.56
SQLE-201ENST00000265896 POTEBQ6S5H4 581 aa18.56■□□□□ 0.56
SQLE-201ENST00000265896 ADAT2Q7Z6V5 191 aaKnown RBP18.56■□□□□ 0.56
SQLE-201ENST00000265896 STIM2Q9P246 746 aa18.56■□□□□ 0.56
SQLE-201ENST00000265896 AKR1B1P15121 316 aa18.56■□□□□ 0.56
SQLE-201ENST00000265896 SEC24CP53992 1094 aa18.56■□□□□ 0.56
SQLE-201ENST00000265896 CACNB3P54284 484 aa18.56■□□□□ 0.56
SQLE-201ENST00000265896 KRT79Q5XKE5 535 aa18.56■□□□□ 0.56
SQLE-201ENST00000265896 SPTY2D1Q68D10 685 aaPredicted RBP18.56■□□□□ 0.56
SQLE-201ENST00000265896 PURBQ96QR8 312 aaKnown RBP18.56■□□□□ 0.56
SQLE-201ENST00000265896 NOP2P46087 812 aaKnown RBP18.55■□□□□ 0.56
SQLE-201ENST00000265896 SCNN1DP51172 638 aa18.55■□□□□ 0.56
SQLE-201ENST00000265896 HLTFQ14527 1009 aaKnown RBP eCLIP18.55■□□□□ 0.56
SQLE-201ENST00000265896 HERC4Q5GLZ8 1057 aaPredicted RBP18.55■□□□□ 0.56
SQLE-201ENST00000265896 FAM83BQ5T0W9 1011 aa18.55■□□□□ 0.56
SQLE-201ENST00000265896 LRRC55Q6ZSA7 311 aa18.55■□□□□ 0.56
SQLE-201ENST00000265896 ZSCAN29Q8IWY8 852 aaPredicted RBP18.55■□□□□ 0.56
SQLE-201ENST00000265896 ARHGEF1Q92888 912 aaKnown RBP18.55■□□□□ 0.56
SQLE-201ENST00000265896 ANKRD2Q9GZV1 360 aa18.55■□□□□ 0.56
SQLE-201ENST00000265896 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.55■□□□□ 0.563e-8■■■■■ 56
SQLE-201ENST00000265896 NHSL1Q5SYE7 1610 aa18.55■□□□□ 0.56
SQLE-201ENST00000265896 TMCO5BA8MYB1 307 aa18.55■□□□□ 0.56
SQLE-201ENST00000265896 KRT18P05783 430 aaKnown RBP18.55■□□□□ 0.56
SQLE-201ENST00000265896 TTC31Q49AM3 519 aaPredicted RBP18.55■□□□□ 0.56
SQLE-201ENST00000265896 CLEC4GQ6UXB4 293 aa18.55■□□□□ 0.56
SQLE-201ENST00000265896 BCCIPQ9P287 314 aaKnown RBP eCLIP18.55■□□□□ 0.56
SQLE-201ENST00000265896 NOC3LQ8WTT2 800 aaKnown RBP18.54■□□□□ 0.56
SQLE-201ENST00000265896 RTFDC1Q9BY42 306 aaPredicted RBP18.54■□□□□ 0.56
SQLE-201ENST00000265896 DOT1LQ8TEK3 1739 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 TARSL2A2RTX5 802 aaKnown RBP18.54■□□□□ 0.56
SQLE-201ENST00000265896 SFI1A8K8P3 1242 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 C6orf229H3BNL8 230 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 PPP1R11O60927 126 aaPredicted RBP18.54■□□□□ 0.56
SQLE-201ENST00000265896 GPSM2P81274 684 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 COASYQ13057 564 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 TCERG1LQ5VWI1 586 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 NAA35Q5VZE5 725 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 HGSNATQ68CP4 663 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 GJB7Q6PEY0 223 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 UNC13DQ70J99 1090 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 TRMT1LQ7Z2T5 733 aaKnown RBP18.54■□□□□ 0.56
SQLE-201ENST00000265896 NOX5Q96PH1 765 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 PANK4Q9NVE7 773 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 ARAP2Q8WZ64 1704 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 ANO9A1A5B4 782 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 PDHBP11177 359 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 EPS15P42566 896 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 ADCY7P51828 1080 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 CASP5P51878 434 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 DCAF17Q5H9S7 520 aaPredicted RBP18.54■□□□□ 0.56
SQLE-201ENST00000265896 PDXDC1Q6P996 788 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 MAATS1Q7Z4T9 603 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 RETREG2Q8NC44 543 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 RAD54LQ92698 747 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 TRIM31Q9BZY9 425 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 VIPAS39Q9H9C1 493 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 A0A1B0GUL6 1792 aa18.54■□□□□ 0.56
SQLE-201ENST00000265896 XIRP1Q702N8 1843 aaKnown RBP18.53■□□□□ 0.56
SQLE-201ENST00000265896 USP17L10C9JJH3 530 aa18.53■□□□□ 0.56
SQLE-201ENST00000265896 NOL4O94818 638 aa18.53■□□□□ 0.56
SQLE-201ENST00000265896 SLC9A1P19634 815 aa18.53■□□□□ 0.56
SQLE-201ENST00000265896 NNTQ13423 1086 aa18.53■□□□□ 0.56
SQLE-201ENST00000265896 MYOCDQ8IZQ8 938 aa18.53■□□□□ 0.56
SQLE-201ENST00000265896 POTEFA5A3E0 1075 aa18.53■□□□□ 0.56
SQLE-201ENST00000265896 KCNK3O14649 394 aa18.53■□□□□ 0.56
SQLE-201ENST00000265896 HSF2BPO75031 334 aa18.53■□□□□ 0.56
SQLE-201ENST00000265896 POTEIP0CG38 1075 aa18.53■□□□□ 0.56
SQLE-201ENST00000265896 PRPHP41219 470 aa18.53■□□□□ 0.56
SQLE-201ENST00000265896 TUBB4BP68371 445 aa18.53■□□□□ 0.56
SQLE-201ENST00000265896 CYP4A11Q02928 519 aa18.53■□□□□ 0.56
SQLE-201ENST00000265896 TMEM266Q2M3C6 531 aa18.53■□□□□ 0.56
SQLE-201ENST00000265896 POTEGQ6S5H5 508 aa18.53■□□□□ 0.56
SQLE-201ENST00000265896 POTEEQ6S8J3 1075 aa18.53■□□□□ 0.56
SQLE-201ENST00000265896 AK8Q96MA6 479 aa18.53■□□□□ 0.56
SQLE-201ENST00000265896 MTMR9Q96QG7 549 aa18.53■□□□□ 0.56
SQLE-201ENST00000265896 DDX25Q9UHL0 483 aaKnown RBP18.53■□□□□ 0.56
SQLE-201ENST00000265896 RTCBQ9Y3I0 505 aaKnown RBP18.53■□□□□ 0.56
SQLE-201ENST00000265896 FAM169AQ9Y6X4 670 aa18.53■□□□□ 0.56
SQLE-201ENST00000265896 MCM3P25205 808 aa18.52■□□□□ 0.56
SQLE-201ENST00000265896 CORO7P57737 925 aa18.52■□□□□ 0.56
SQLE-201ENST00000265896 GTF2IP78347 998 aa18.52■□□□□ 0.56
SQLE-201ENST00000265896 SFMBT2Q5VUG0 894 aa18.52■□□□□ 0.56
SQLE-201ENST00000265896 WDR66Q8TBY9 1149 aa18.52■□□□□ 0.56
SQLE-201ENST00000265896 TSGA10Q9BZW7 698 aa18.52■□□□□ 0.56
SQLE-201ENST00000265896 NDUFAB1O14561 156 aa18.52■□□□□ 0.56
SQLE-201ENST00000265896 TUBBP07437 444 aa18.52■□□□□ 0.56
SQLE-201ENST00000265896 COPB2P35606 906 aa18.52■□□□□ 0.56
SQLE-201ENST00000265896 MAGEA9P43362 315 aa18.52■□□□□ 0.56
SQLE-201ENST00000265896 PSMC6P62333 389 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms