RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ANO9A1A5B4 782 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 WTIPA6NIX2 430 aaPredicted RBP9.64□□□□□ -0.87
VAPB-201ENST00000265619 IGF2BP3O00425 579 aaKnown RBP eCLIP9.64□□□□□ -0.87
VAPB-201ENST00000265619 UBOX5O94941 541 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 RARAP10276 462 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 GHRP10912 638 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 NCALDP61601 193 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 TAF11Q15544 211 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 VPS72Q15906 364 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 SLC4A8Q2Y0W8 1093 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 CCDC70Q6NSX1 233 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 FAM196AQ6ZSG2 479 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 MYLK4Q86YV6 388 aaPredicted RBP9.64□□□□□ -0.87
VAPB-201ENST00000265619 CCDC82Q8N4S0 544 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 TRIML1Q8N9V2 468 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 PLEKHG4BQ96PX9 1271 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 MTRQ99707 1265 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 DSCC1Q9BVC3 393 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 TLR10Q9BXR5 811 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 LUC7L2Q9Y383 392 aaKnown RBP9.64□□□□□ -0.87
VAPB-201ENST00000265619 GPR75-ASB3A0A0A6YYF3 556 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 BUB1O43683 1085 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 ORC4O43929 436 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 MYL1P05976 194 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 NQO1P15559 274 aaKnown RBP9.64□□□□□ -0.87
VAPB-201ENST00000265619 RFC4P35249 363 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 RFX5P48382 616 aaPredicted RBP9.64□□□□□ -0.87
VAPB-201ENST00000265619 MTA1Q13330 715 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 RIPK1Q13546 671 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 CCDC96Q2M329 555 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 ODF2Q5BJF6 829 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 TNS2Q63HR2 1409 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 CYB5R4Q7L1T6 521 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 RPS6KC1Q96S38 1066 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 PAIP2Q9BPZ3 127 aaKnown RBP9.64□□□□□ -0.87
VAPB-201ENST00000265619 YIPF2Q9BWQ6 316 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 WDR35Q9P2L0 1181 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 PNMA3Q9UL41 463 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 ASB3Q9Y575 518 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 AFDNP55196 1824 aaKnown RBP9.64□□□□□ -0.87
VAPB-201ENST00000265619 BCL9LQ86UU0 1499 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 TNFRSF8P28908 595 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 IL6STP40189 918 aaPredicted RBP9.64□□□□□ -0.87
VAPB-201ENST00000265619 CTSWP56202 376 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 PPP2R2AP63151 447 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 MXRA7P84157 204 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 SAFBQ15424 915 aaKnown RBP eCLIP9.64□□□□□ -0.87
VAPB-201ENST00000265619 SLC51AQ86UW1 340 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 EXOC8Q8IYI6 725 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 SYCP3Q8IZU3 236 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 NOC3LQ8WTT2 800 aaKnown RBP9.64□□□□□ -0.87
VAPB-201ENST00000265619 NAF1Q96HR8 494 aaKnown RBP9.64□□□□□ -0.87
VAPB-201ENST00000265619 ISCA1Q9BUE6 129 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 COPRSQ9NQ92 184 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 FAM217BQ9NTX9 383 aaPredicted RBP9.64□□□□□ -0.87
VAPB-201ENST00000265619 ZNF219Q9P2Y4 722 aaPredicted RBP9.64□□□□□ -0.87
VAPB-201ENST00000265619 TSKSQ9UJT2 592 aa9.64□□□□□ -0.87
VAPB-201ENST00000265619 RAD51CO43502 376 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 TPP2P29144 1249 aaPredicted RBP9.63□□□□□ -0.87
VAPB-201ENST00000265619 RFC5P40937 340 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 POLE2P56282 527 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 ERFEQ4G0M1 354 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 EARS2Q5JPH6 523 aaKnown RBP9.63□□□□□ -0.87
VAPB-201ENST00000265619 UBAP2Q5T6F2 1119 aaKnown RBP9.63□□□□□ -0.87
VAPB-201ENST00000265619 RRAGBQ5VZM2 374 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 AMIGO3Q86WK7 504 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 MB21D1Q8N884 522 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 ABCF2Q9UG63 623 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 DDX60Q8IY21 1712 aaKnown RBP9.63□□□□□ -0.87
VAPB-201ENST00000265619 FMNL1O95466 1100 aaPredicted RBP9.63□□□□□ -0.87
VAPB-201ENST00000265619 PCCAP05165 728 aaPredicted RBP9.63□□□□□ -0.87
VAPB-201ENST00000265619 IL15P40933 162 aaPredicted RBP9.63□□□□□ -0.87
VAPB-201ENST00000265619 CASP7P55210 303 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 ERVK-9P63128 1117 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 NTRK3Q16288 839 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 ATG9AQ7Z3C6 839 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 KIAA0825Q8IV33 1275 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 MREGQ8N565 214 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 TTLL11Q8NHH1 800 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 UCMAQ8WVF2 138 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 MTMR8Q96EF0 704 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 ZNF317Q96PQ6 595 aaPredicted RBP9.63□□□□□ -0.87
VAPB-201ENST00000265619 ELAC2Q9BQ52 826 aaKnown RBP9.63□□□□□ -0.87
VAPB-201ENST00000265619 RTCBQ9Y3I0 505 aaKnown RBP9.63□□□□□ -0.87
VAPB-201ENST00000265619 KCPQ6ZWJ8 1503 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 XDHP47989 1333 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 GCOM1H8Y6P7 765 aaPredicted RBP9.63□□□□□ -0.87
VAPB-201ENST00000265619 FGAP02671 866 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 MYZAPP0CAP1 466 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 GNAQP50148 359 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 SCARF1Q14162 830 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 PTPROQ16827 1216 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 SH3RF1Q7Z6J0 888 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 CCDC170Q8IYT3 715 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 LRRC34Q8IZ02 419 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 FNBP4Q8N3X1 1017 aaPredicted RBP9.63□□□□□ -0.87
VAPB-201ENST00000265619 ZNF507Q8TCN5 953 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 SHISA4Q96DD7 197 aa9.63□□□□□ -0.87
VAPB-201ENST00000265619 DNAAF2Q9NVR5 837 aaKnown RBP9.63□□□□□ -0.87
VAPB-201ENST00000265619 CAPN11Q9UMQ6 739 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms