RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 KCNJ18B7U540 433 aa10.36□□□□□ -0.75
SSR3-201ENST00000265044 MATR3P43243 847 aaKnown RBP eCLIP10.36□□□□□ -0.75
SSR3-201ENST00000265044 FMR1Q06787 632 aaKnown RBP eCLIP10.36□□□□□ -0.75
SSR3-201ENST00000265044 KCNJ12Q14500 433 aa10.36□□□□□ -0.75
SSR3-201ENST00000265044 PTPN14Q15678 1187 aa10.36□□□□□ -0.75
SSR3-201ENST00000265044 CCAR2Q8N163 923 aaKnown RBP10.36□□□□□ -0.75
SSR3-201ENST00000265044 SFI1A8K8P3 1242 aa10.36□□□□□ -0.75
SSR3-201ENST00000265044 POTEB2H3BUK9 544 aa10.36□□□□□ -0.75
SSR3-201ENST00000265044 NAP1L1P55209 391 aaKnown RBP10.36□□□□□ -0.75
SSR3-201ENST00000265044 CEP135Q66GS9 1140 aa10.36□□□□□ -0.75
SSR3-201ENST00000265044 SEPT14Q6ZU15 432 aa10.36□□□□□ -0.75
SSR3-201ENST00000265044 ZNF397Q8NF99 534 aaPredicted RBP10.36□□□□□ -0.75
SSR3-201ENST00000265044 RAD54LQ92698 747 aa10.36□□□□□ -0.75
SSR3-201ENST00000265044 TEX13BQ9BXU2 312 aa10.36□□□□□ -0.75
SSR3-201ENST00000265044 GINM1Q9NU53 330 aa10.36□□□□□ -0.75
SSR3-201ENST00000265044 FCER1AP12319 257 aa10.36□□□□□ -0.75
SSR3-201ENST00000265044 CLCN1P35523 988 aa10.36□□□□□ -0.75
SSR3-201ENST00000265044 ADKP55263 362 aaKnown RBP10.36□□□□□ -0.75
SSR3-201ENST00000265044 KIAA1755Q5JYT7 1200 aa10.36□□□□□ -0.75
SSR3-201ENST00000265044 MAP1SQ66K74 1059 aaPredicted RBP10.36□□□□□ -0.75
SSR3-201ENST00000265044 MOB2Q70IA6 237 aa10.36□□□□□ -0.75
SSR3-201ENST00000265044 HS2ST1Q7LGA3 356 aa10.36□□□□□ -0.75
SSR3-201ENST00000265044 ANKRD13AQ8IZ07 590 aa10.36□□□□□ -0.75
SSR3-201ENST00000265044 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.36□□□□□ -0.75
SSR3-201ENST00000265044 ANKRD31Q8N7Z5 1873 aa10.36□□□□□ -0.75
SSR3-201ENST00000265044 AP5Z1O43299 807 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 FDX1P10109 184 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 FXR2P51116 673 aaKnown RBP eCLIP10.35□□□□□ -0.75
SSR3-201ENST00000265044 LTBP3Q9NS15 1303 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 CCDC169A6NNP5 214 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 FAM86B1E9PN63 330 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 MSH4O15457 936 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 FAM86B2P0C5J1 330 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 TNNT1P13805 278 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 SREBF1P36956 1147 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 GOLGA8FQ08AF8 430 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 GOLGA8DPQ0D2H9 430 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 KCTD2Q14681 263 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 ARID5BQ14865 1188 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 SPECC1LQ69YQ0 1117 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 BANK1Q8NDB2 785 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 DYDC2Q96IM9 177 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 TAAR1Q96RJ0 339 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 BPIFA3Q9BQP9 254 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 ACAD9Q9H845 621 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 MYH6P13533 1939 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 CCP110O43303 1012 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 VGLL4Q14135 290 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 XKR9Q5GH70 373 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 BTNL9Q6UXG8 535 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 NSUN6Q8TEA1 469 aaKnown RBP10.35□□□□□ -0.75
SSR3-201ENST00000265044 CACTINQ8WUQ7 758 aaKnown RBP10.35□□□□□ -0.75
SSR3-201ENST00000265044 P2RX5Q93086 422 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 KLRG1Q96E93 195 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 NUDT12Q9BQG2 462 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 EIF2AK1Q9BQI3 630 aaKnown RBP10.35□□□□□ -0.75
SSR3-201ENST00000265044 SH2D3AQ9BRG2 576 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 TMX1Q9H3N1 280 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 SYNPO2Q9UMS6 1093 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 PPP2R3BQ9Y5P8 575 aa10.35□□□□□ -0.75
SSR3-201ENST00000265044 MYMKA6NI61 221 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 CETN3O15182 167 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 OSBPP22059 807 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 CCND2P30279 289 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 SETQ01105 290 aaPredicted RBP10.34□□□□□ -0.75
SSR3-201ENST00000265044 NACC1Q96RE7 527 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 IMPACTQ9P2X3 320 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 RWDD2AQ9UIY3 292 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 NAV1Q8NEY1 1877 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 FAM237AA0A1B0GTK4 181 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 NOP56O00567 594 aaKnown RBP10.34□□□□□ -0.75
SSR3-201ENST00000265044 USO1O60763 962 aaKnown RBP10.34□□□□□ -0.75
SSR3-201ENST00000265044 PRELPP51888 382 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 STK4Q13043 487 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 ARHGAP29Q52LW3 1261 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 DCAF17Q5H9S7 520 aaPredicted RBP10.34□□□□□ -0.75
SSR3-201ENST00000265044 PDXDC2PQ6P474 469 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 SARM1Q6SZW1 724 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 UNC13DQ70J99 1090 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 GPIHBP1Q8IV16 184 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 C4orf32Q8N8J7 132 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 BICD1Q96G01 975 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 RANBP17Q9H2T7 1088 aaKnown RBP10.34□□□□□ -0.75
SSR3-201ENST00000265044 EMILIN3Q9NT22 766 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 COL4A3BPQ9Y5P4 624 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 TIAM2Q8IVF5 1701 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 AKR1B15C9JRZ8 316 aaPredicted RBP10.34□□□□□ -0.75
SSR3-201ENST00000265044 GRB10Q13322 594 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 TDRD12Q587J7 1177 aaKnown RBP10.34□□□□□ -0.75
SSR3-201ENST00000265044 ODR4Q5SWX8 454 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 LRRC8AQ8IWT6 810 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 FAM178BQ8IXR5 827 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 DHTKD1Q96HY7 919 aaPredicted RBP10.34□□□□□ -0.75
SSR3-201ENST00000265044 MLXIPQ9HAP2 919 aa10.34□□□□□ -0.75
SSR3-201ENST00000265044 NPHP3-ACAD11A0A0J9YXS1 232 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 VWA5AO00534 786 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 MYCNP04198 464 aaPredicted RBP10.33□□□□□ -0.76
SSR3-201ENST00000265044 CCNE1P24864 410 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 RDH13Q8NBN7 331 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 CCDC112Q8NEF3 446 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms