RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 PRPF6O94906 941 aaKnown RBP10.1□□□□□ -0.79
MSH4-201ENST00000263187 FAM153BP0C7A2 387 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 CACNB3P54284 484 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 SF3A3Q12874 501 aaKnown RBP eCLIP10.1□□□□□ -0.79
MSH4-201ENST00000263187 FAM153CQ494X1 144 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 KRT79Q5XKE5 535 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 CCDC170Q8IYT3 715 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 FAM133AQ8N9E0 248 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 TBC1D5Q92609 795 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 RTFDC1Q9BY42 306 aaPredicted RBP10.1□□□□□ -0.79
MSH4-201ENST00000263187 NYXQ9GZU5 481 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 MED4Q9NPJ6 270 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 FAM153AQ9UHL3 310 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 PLAGL2Q9UPG8 496 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 KIAA1024Q9UPX6 916 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 RTCBQ9Y3I0 505 aaKnown RBP10.1□□□□□ -0.79
MSH4-201ENST00000263187 JRKLQ9Y4A0 524 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 ARAP2Q8WZ64 1704 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 ZC3H4Q9UPT8 1303 aaKnown RBP10.1□□□□□ -0.79
MSH4-201ENST00000263187 ZNF831Q5JPB2 1677 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 KRT18P05783 430 aaKnown RBP10.1□□□□□ -0.79
MSH4-201ENST00000263187 CARSP49589 748 aaKnown RBP10.1□□□□□ -0.79
MSH4-201ENST00000263187 GTF2IP78347 998 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 GUCY2DQ02846 1103 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 CCDC70Q6NSX1 233 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 TRIM58Q8NG06 486 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 FAM76AQ8TAV0 307 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 PSD3Q9NYI0 1048 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 NARFQ9UHQ1 456 aa10.1□□□□□ -0.79
MSH4-201ENST00000263187 EDIL3O43854 480 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 PALMO75781 387 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 ADCY7P51828 1080 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 TMEM266Q2M3C6 531 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 HERC4Q5GLZ8 1057 aaPredicted RBP10.09□□□□□ -0.79
MSH4-201ENST00000263187 CENPPQ6IPU0 288 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 C8orf74Q6P047 294 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 IKZF4Q9H2S9 585 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 POTEB3A0JP26 581 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 POTECB2RU33 542 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 GLI1P08151 1106 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 PDHBP11177 359 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 KCNMA1Q12791 1236 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 PDCLQ13371 301 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 MAN2A1Q16706 1144 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 POTEBQ6S5H4 581 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 ZNF804AQ7Z570 1209 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 NOC3LQ8WTT2 800 aaKnown RBP10.09□□□□□ -0.79
MSH4-201ENST00000263187 ALS2CR12Q96Q35 445 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 ERGIC2Q96RQ1 377 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 RUFY1Q96T51 708 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 KRT12Q99456 494 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 EPB41L5Q9HCM4 733 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 CD209Q9NNX6 404 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 BCS1LQ9Y276 419 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 A0A1B0GUL6 1792 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 LY75O60449 1722 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 USP17L10C9JJH3 530 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 IVLP07476 585 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 PRPHP41219 470 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 EPS15P42566 896 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 PAFAH1B1P43034 410 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 LIG3P49916 1009 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 GNGT1P63211 74 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 SLC10A5Q5PT55 438 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 CNBD1Q8NA66 436 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 RPGRQ92834 1020 aaKnown RBP10.09□□□□□ -0.79
MSH4-201ENST00000263187 AK8Q96MA6 479 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 TLR10Q9BXR5 811 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 PANK4Q9NVE7 773 aa10.09□□□□□ -0.79
MSH4-201ENST00000263187 DDX25Q9UHL0 483 aaKnown RBP10.09□□□□□ -0.79
MSH4-201ENST00000263187 TLR2O60603 784 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 PPP1R11O60927 126 aaPredicted RBP10.08□□□□□ -0.8
MSH4-201ENST00000263187 KLRC1P26715 233 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 TCP10Q12799 353 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 HAUS3Q68CZ6 603 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 UNC13DQ70J99 1090 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 ZSCAN29Q8IWY8 852 aaPredicted RBP10.08□□□□□ -0.8
MSH4-201ENST00000263187 DAGLBQ8NCG7 672 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 BAP1Q92560 729 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 RAD54LQ92698 747 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 FAM184BQ9ULE4 1060 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 BTAF1O14981 1849 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 SFI1A8K8P3 1242 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 LAD1O00515 517 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 RXRBP28702 533 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 NOP2P46087 812 aaKnown RBP10.08□□□□□ -0.8
MSH4-201ENST00000263187 GSTO1P78417 241 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 COASYQ13057 564 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 KIAA0753Q2KHM9 967 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 FAM83BQ5T0W9 1011 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 TCERG1LQ5VWI1 586 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 TRMT1LQ7Z2T5 733 aaKnown RBP10.08□□□□□ -0.8
MSH4-201ENST00000263187 MYOCDQ8IZQ8 938 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 RETREG2Q8NC44 543 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 NEDD1Q8NHV4 660 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 BCAS4Q8TDM0 211 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 CCDC43Q96MW1 224 aaKnown RBP10.08□□□□□ -0.8
MSH4-201ENST00000263187 MTMR9Q96QG7 549 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 SPZ1Q9BXG8 430 aa10.08□□□□□ -0.8
MSH4-201ENST00000263187 HYOU1Q9Y4L1 999 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms