RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 APOA5Q6Q788 366 aa10.93□□□□□ -0.66
TTC39A-201ENST00000262675 LRRC8AQ8IWT6 810 aa10.93□□□□□ -0.66
TTC39A-201ENST00000262675 ALG1Q9BT22 464 aa10.93□□□□□ -0.66
TTC39A-201ENST00000262675 ACAD9Q9H845 621 aa10.93□□□□□ -0.66
TTC39A-201ENST00000262675 LOC102724159A0A0B4J2E5 919 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 CCDC196A0A1B0GTZ2 297 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 CTIFO43310 598 aaKnown RBP10.92□□□□□ -0.66
TTC39A-201ENST00000262675 ZNF202O95125 648 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 APPP05067 770 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 BMP3P12645 472 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 U2AF2P26368 475 aaKnown RBP eCLIP10.92□□□□□ -0.66
TTC39A-201ENST00000262675 NLRP12P59046 1061 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 PWP2Q15269 919 aaKnown RBP10.92□□□□□ -0.66
TTC39A-201ENST00000262675 RAB30Q15771 203 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 ARMCX2Q7L311 632 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 CPXCR1Q8N123 301 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 NEDD1Q8NHV4 660 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 IGDCC4Q8TDY8 1250 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 KIFC2Q96AC6 838 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 VTI1AQ96AJ9 217 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 TIFAQ96CG3 184 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 GMCL1Q96IK5 515 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 GAS2L1Q99501 681 aaPredicted RBP10.92□□□□□ -0.66
TTC39A-201ENST00000262675 FTOQ9C0B1 505 aaKnown RBP eCLIP10.92□□□□□ -0.66
TTC39A-201ENST00000262675 RNF41Q9H4P4 317 aaPredicted RBP10.92□□□□□ -0.66
TTC39A-201ENST00000262675 PNMA2Q9UL42 364 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 Q9Y3F1 56 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 CLIC4Q9Y696 253 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 ASGR1P07306 291 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 TSPY3P0CV98 308 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 TSPY8P0CW00 308 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 ITGB8P26012 769 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 NDUFA8P51970 172 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 STAT2P52630 851 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 FOSBP53539 338 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 RBM10P98175 930 aaKnown RBP10.92□□□□□ -0.66
TTC39A-201ENST00000262675 CCDC144BQ3MJ40 725 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 GNASQ5JWF2 1037 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 AXDND1Q5T1B0 1012 aaPredicted RBP10.92□□□□□ -0.66
TTC39A-201ENST00000262675 AKNAD1Q5T1N1 836 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 NUP88Q99567 741 aaPredicted RBP10.92□□□□□ -0.66
TTC39A-201ENST00000262675 NAPBQ9H115 298 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 ZNF576Q9H609 170 aa10.92□□□□□ -0.66
TTC39A-201ENST00000262675 HOOK1Q9UJC3 728 aaKnown RBP10.92□□□□□ -0.66
TTC39A-201ENST00000262675 A0A1B0GVL5 298 aa10.91□□□□□ -0.66
TTC39A-201ENST00000262675 EPHB4P54760 987 aa10.91□□□□□ -0.66
TTC39A-201ENST00000262675 GNL2Q13823 731 aaKnown RBP10.91□□□□□ -0.66
TTC39A-201ENST00000262675 TJAP1Q5JTD0 557 aa10.91□□□□□ -0.66
TTC39A-201ENST00000262675 RASIP1Q5U651 963 aa10.91□□□□□ -0.66
TTC39A-201ENST00000262675 SLFN13Q68D06 897 aa10.91□□□□□ -0.66
TTC39A-201ENST00000262675 KRT40Q6A162 431 aa10.91□□□□□ -0.66
TTC39A-201ENST00000262675 TBC1D10CQ8IV04 446 aa10.91□□□□□ -0.66
TTC39A-201ENST00000262675 IFNL3Q8IZI9 196 aa10.91□□□□□ -0.66
TTC39A-201ENST00000262675 CCDC150Q8NCX0 1101 aa10.91□□□□□ -0.66
TTC39A-201ENST00000262675 CACTINQ8WUQ7 758 aaKnown RBP10.91□□□□□ -0.66
TTC39A-201ENST00000262675 STAG1Q8WVM7 1258 aa10.91□□□□□ -0.66
TTC39A-201ENST00000262675 CEP95Q96GE4 821 aa10.91□□□□□ -0.66
TTC39A-201ENST00000262675 AP5M1Q9H0R1 490 aa10.91□□□□□ -0.66
TTC39A-201ENST00000262675 RAVER2Q9HCJ3 691 aaKnown RBP10.91□□□□□ -0.66
TTC39A-201ENST00000262675 GPHNQ9NQX3 736 aaPredicted RBP10.91□□□□□ -0.66
TTC39A-201ENST00000262675 MSRAQ9UJ68 235 aa10.91□□□□□ -0.66
TTC39A-201ENST00000262675 RIPK3Q9Y572 518 aa10.91□□□□□ -0.66
TTC39A-201ENST00000262675 MORC2Q9Y6X9 1032 aaPredicted RBP10.91□□□□□ -0.66
TTC39A-201ENST00000262675 LAMA3Q16787 3333 aa10.91□□□□□ -0.66
TTC39A-201ENST00000262675 CCDC69A6NI79 296 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 CUTAO60888 179 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 IFNAR1P17181 557 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 TNFAIP2Q03169 654 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 SSRP1Q08945 709 aaKnown RBP10.9□□□□□ -0.66
TTC39A-201ENST00000262675 SAFBQ15424 915 aaKnown RBP eCLIP10.9□□□□□ -0.66
TTC39A-201ENST00000262675 TMEM67Q5HYA8 995 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 NFXL1Q6ZNB6 911 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 CYB5R4Q7L1T6 521 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 FAM126BQ8IXS8 530 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 C17orf53Q8N3J3 647 aaPredicted RBP10.9□□□□□ -0.66
TTC39A-201ENST00000262675 LY9Q9HBG7 655 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 TUBE1Q9UJT0 475 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 HPSEQ9Y251 543 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 SLC12A7Q9Y666 1083 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 GOLGA8AA7E2F4 631 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 SMIM22K7EJ46 135 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 PFKFB1P16118 471 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 SYKP43405 635 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 NTRK3Q16288 839 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 TMEM240Q5SV17 173 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 IQSEC1Q6DN90 963 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 MFSD6Q6ZSS7 791 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 CCDC144CPQ8IYA2 1237 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 TRIM22Q8IYM9 498 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 AOPEPQ8N6M6 819 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 FAM133AQ8N9E0 248 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 SLC43A3Q8NBI5 491 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 HERVK_113Q902F9 699 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 PKNOX2Q96KN3 472 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.9□□□□□ -0.66
TTC39A-201ENST00000262675 IL23AQ9NPF7 189 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 PRDM6Q9NQX0 595 aa10.9□□□□□ -0.66
TTC39A-201ENST00000262675 COL6A3P12111 3177 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 ERICH2A1L162 156 aa10.89□□□□□ -0.67
TTC39A-201ENST00000262675 CCP110O43303 1012 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms