RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 ZSWIM4Q9H7M6 989 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 EPB41P11171 864 aaKnown RBP9.08□□□□□ -0.96
PTPN3-201ENST00000262539 SREBF1P36956 1147 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 CEP55Q53EZ4 464 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 NELFBQ8WX92 580 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 EIF3JO75822 258 aaKnown RBP9.07□□□□□ -0.96
PTPN3-201ENST00000262539 KIF4AO95239 1232 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 RPA1P27694 616 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 RASA3Q14644 834 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 KIF22Q14807 665 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 C10orf76Q5T2E6 689 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 PTGS1P23219 599 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 CAP2P40123 477 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 SLFNL1Q499Z3 407 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 KIAA1586Q9HCI6 787 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 ARMCX3Q9UH62 379 aaPredicted RBP9.07□□□□□ -0.96
PTPN3-201ENST00000262539 PNMA3Q9UL41 463 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 BCS1LQ9Y276 419 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 ACTN4O43707 911 aaKnown RBP9.07□□□□□ -0.96
PTPN3-201ENST00000262539 CCDC102AQ96A19 550 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 THSD7AQ9UPZ6 1657 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 A0A1B0GTH6 734 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 PDXKO00764 312 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 COPB1P53618 953 aaKnown RBP9.07□□□□□ -0.96
PTPN3-201ENST00000262539 DPYDQ12882 1025 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 CEP135Q66GS9 1140 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 TBC1D5Q92609 795 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 NOC4LQ9BVI4 516 aaKnown RBP9.07□□□□□ -0.96
PTPN3-201ENST00000262539 TDRD3Q9H7E2 651 aaKnown RBP9.07□□□□□ -0.96
PTPN3-201ENST00000262539 DNAI1Q9UI46 699 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 ANO9A1A5B4 782 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 LGALS16A8MUM7 142 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 ATP8B1O43520 1251 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 KRT9P35527 623 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 SLC44A5Q8NCS7 719 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 MTMR8Q96EF0 704 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 FANCLQ9NW38 375 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 LCMT1Q9UIC8 334 aa9.07□□□□□ -0.96
PTPN3-201ENST00000262539 TRAF5O00463 557 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 EYA4O95677 639 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 CHGBP05060 677 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 PNOCQ13519 176 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 SLC9C1Q4G0N8 1177 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 BRDTQ58F21 947 aaPredicted RBP9.06□□□□□ -0.96
PTPN3-201ENST00000262539 MSL1Q68DK7 614 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 LRRC8AQ8IWT6 810 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 CHST13Q8NET6 341 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 PPP1R14CQ8TAE6 165 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 NSUN6Q8TEA1 469 aaKnown RBP9.06□□□□□ -0.96
PTPN3-201ENST00000262539 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.06□□□□□ -0.96
PTPN3-201ENST00000262539 CYP3A7-CYP3A51PA0A087WV96 503 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 KCNJ18B7U540 433 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 CYP3A7P24462 503 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 GJC1P36383 396 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 KCNJ12Q14500 433 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 C11orf57Q6ZUT1 292 aaPredicted RBP9.06□□□□□ -0.96
PTPN3-201ENST00000262539 GPRASP2Q96D09 838 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 TEX13BQ9BXU2 312 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 CCPG1Q9ULG6 757 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 IVNS1ABPQ9Y6Y0 642 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 P4HA2O15460 535 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 EN1Q05925 392 aaPredicted RBP9.06□□□□□ -0.96
PTPN3-201ENST00000262539 CLIC6Q96NY7 704 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 TMX1Q9H3N1 280 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 DPEP1P16444 411 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 MBOAT7Q96N66 472 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 GOLPH3LQ9H4A5 285 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 IL17RBQ9NRM6 502 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 SLC16A3O15427 465 aaKnown RBP9.06□□□□□ -0.96
PTPN3-201ENST00000262539 GRIN3BO60391 1043 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 CFBP00751 764 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 CXCL9Q07325 125 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 MIER3Q7Z3K6 550 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 MYRIPQ8NFW9 859 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 RAD54LQ92698 747 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 IMPG2Q9BZV3 1241 aa9.06□□□□□ -0.96
PTPN3-201ENST00000262539 CDK17Q00537 523 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 TCP10Q12799 353 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 Q4G0T1 1027 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 ILDR1Q86SU0 546 aaPredicted RBP9.05□□□□□ -0.96
PTPN3-201ENST00000262539 SCYL3Q8IZE3 742 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 OXER1Q8TDS5 423 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 DDX12PQ92771 950 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 DCPSQ96C86 337 aaKnown RBP9.05□□□□□ -0.96
PTPN3-201ENST00000262539 FRMD4BQ9Y2L6 1034 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 WDR64B1ANS9 1081 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 USP17L15C9J2P7 530 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 USP17L13C9JLJ4 530 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 USP17L11C9JVI0 530 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 USP17L18D6R9N7 530 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 USP17L22D6RA61 530 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 USP17L17D6RBQ6 530 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 USP17L19D6RCP7 530 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 USP17L20D6RJB6 530 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 SLC25A27O95847 323 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 GOLGA8HP0CJ92 632 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 MAPTP10636 758 aaKnown RBP9.05□□□□□ -0.96
PTPN3-201ENST00000262539 USP17L24Q0WX57 530 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 ADGRF4Q8IZF3 695 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 C7orf43Q8WVR3 580 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms