RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 COASYQ13057 564 aa18.13■□□□□ 0.49
TM9SF1-201ENST00000261789 PDIA5Q14554 519 aa18.13■□□□□ 0.49
TM9SF1-201ENST00000261789 ASPRV1Q53RT3 343 aa18.13■□□□□ 0.49
TM9SF1-201ENST00000261789 NHSQ6T4R5 1651 aa18.13■□□□□ 0.49
TM9SF1-201ENST00000261789 DNAJC19Q96DA6 116 aa18.13■□□□□ 0.49
TM9SF1-201ENST00000261789 RPGRIP1Q96KN7 1286 aa18.13■□□□□ 0.49
TM9SF1-201ENST00000261789 RAB34Q9BZG1 259 aa18.13■□□□□ 0.49
TM9SF1-201ENST00000261789 PLEKHA4Q9H4M7 779 aa18.13■□□□□ 0.49
TM9SF1-201ENST00000261789 E9PMD0 336 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 TRAF5O00463 557 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 SLC1A4P43007 532 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 SCNN1DP51172 638 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 DNA2P51530 1060 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 LRRC63Q05C16 580 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 GABPAQ06546 454 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 MAP9Q49MG5 647 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 TMEM119Q4V9L6 283 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 CCDC84Q86UT8 332 aaPredicted RBP18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 MTMR8Q96EF0 704 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 GJD4Q96KN9 370 aaPredicted RBP18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 OSBPL9Q96SU4 736 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 MED4Q9NPJ6 270 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 USP17L15C9J2P7 530 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 USP17L13C9JLJ4 530 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 USP17L11C9JVI0 530 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 USP17L18D6R9N7 530 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 USP17L22D6RA61 530 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 USP17L17D6RBQ6 530 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 USP17L19D6RCP7 530 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 USP17L20D6RJB6 530 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 MPHOSPH10O00566 681 aaKnown RBP18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 SERPINB2P05120 415 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 SNHG28P0DPA3 235 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 ZNF543Q08ER8 600 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 USP17L24Q0WX57 530 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 ENOX2Q16206 610 aaKnown RBP18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 CRY2Q49AN0 593 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 TDRD12Q587J7 1177 aaKnown RBP18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 USP17L6PQ6QN14 398 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 LEKR1Q6ZMV7 388 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 CERS3Q8IU89 383 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 MYOCDQ8IZQ8 938 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 ACBD3Q9H3P7 528 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 RIC8AQ9NPQ8 531 aa18.12■□□□□ 0.49
TM9SF1-201ENST00000261789 PNMA6FA0A0J9YX94 578 aa18.11■□□□□ 0.49
TM9SF1-201ENST00000261789 ORC2Q13416 577 aaPredicted RBP18.11■□□□□ 0.49
TM9SF1-201ENST00000261789 SKIDA1Q1XH10 827 aa18.11■□□□□ 0.49
TM9SF1-201ENST00000261789 SHROOM1Q2M3G4 852 aaPredicted RBP18.11■□□□□ 0.49
TM9SF1-201ENST00000261789 HGSNATQ68CP4 663 aa18.11■□□□□ 0.49
TM9SF1-201ENST00000261789 SPATA4Q8NEY3 305 aa18.11■□□□□ 0.49
TM9SF1-201ENST00000261789 MS4A14Q96JA4 679 aa18.11■□□□□ 0.49
TM9SF1-201ENST00000261789 PANK4Q9NVE7 773 aa18.11■□□□□ 0.49
TM9SF1-201ENST00000261789 PCDHA12Q9UN75 941 aa18.11■□□□□ 0.49
TM9SF1-201ENST00000261789 AFF2P51816 1311 aa18.11■□□□□ 0.49
TM9SF1-201ENST00000261789 MYH7BA7E2Y1 1941 aa18.11■□□□□ 0.49
TM9SF1-201ENST00000261789 AGPSO00116 658 aa18.11■□□□□ 0.49
TM9SF1-201ENST00000261789 PRPF6O94906 941 aaKnown RBP18.11■□□□□ 0.49
TM9SF1-201ENST00000261789 MCM3P25205 808 aa18.11■□□□□ 0.49
TM9SF1-201ENST00000261789 NAP1L1P55209 391 aaKnown RBP18.11■□□□□ 0.49
TM9SF1-201ENST00000261789 ARID5AQ03989 594 aa18.11■□□□□ 0.49
TM9SF1-201ENST00000261789 PDXDC1Q6P996 788 aa18.11■□□□□ 0.49
TM9SF1-201ENST00000261789 TRIM34Q9BYJ4 488 aa18.11■□□□□ 0.49
TM9SF1-201ENST00000261789 VIPAS39Q9H9C1 493 aa18.11■□□□□ 0.49
TM9SF1-201ENST00000261789 KIAA1024Q9UPX6 916 aa18.11■□□□□ 0.49
TM9SF1-201ENST00000261789 LCA5LO95447 670 aa18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 TTLL1O95922 423 aa18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 GYS1P13807 737 aa18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 AARSP49588 968 aaKnown RBP eCLIP18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 CCDC40Q4G0X9 1142 aa18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 SLF2Q8IX21 1173 aa18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 CERS5Q8N5B7 392 aa18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 RBM17Q96I25 401 aaKnown RBP18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 TSG101Q99816 390 aa18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 TAF1LQ8IZX4 1826 aa18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 IGKV6D-41A0A0C4DH26 115 aa18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 A0A0U1RQG5 324 aaPredicted RBP18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 POTEB3A0JP26 581 aa18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 POTECB2RU33 542 aa18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 TLR2O60603 784 aa18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 NOL4O94818 638 aa18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 FGFR1OPO95684 399 aaKnown RBP18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 CLK2P49760 499 aaKnown RBP18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 ASTE1Q2TB18 679 aaPredicted RBP18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 ZCWPW2Q504Y3 356 aa18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 MEX3CQ5U5Q3 659 aaKnown RBP18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 POTEBQ6S5H4 581 aa18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 PSTPIP2Q9H939 334 aa18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 SERPINB13Q9UIV8 391 aa18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 COL4A3BPQ9Y5P4 624 aa18.1■□□□□ 0.49
TM9SF1-201ENST00000261789 FAM196BA6NMK8 535 aa18.09■□□□□ 0.49
TM9SF1-201ENST00000261789 TRIM66O15016 1216 aa18.09■□□□□ 0.49
TM9SF1-201ENST00000261789 ONECUT3O60422 494 aaPredicted RBP18.09■□□□□ 0.49
TM9SF1-201ENST00000261789 STAT3P40763 770 aa18.09■□□□□ 0.49
TM9SF1-201ENST00000261789 POLR2FP61218 127 aaKnown RBP18.09■□□□□ 0.49
TM9SF1-201ENST00000261789 FAM26FQ5R3K3 315 aa18.09■□□□□ 0.49
TM9SF1-201ENST00000261789 PPP4R3AQ6IN85 833 aa18.09■□□□□ 0.49
TM9SF1-201ENST00000261789 CUL5Q93034 780 aa18.09■□□□□ 0.49
TM9SF1-201ENST00000261789 ZHX3Q9H4I2 956 aa18.09■□□□□ 0.49
TM9SF1-201ENST00000261789 hCG_1984214I3L0E3 225 aa18.09■□□□□ 0.49
TM9SF1-201ENST00000261789 FKBP3Q00688 224 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms