RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 MYH3P11055 1940 aa17.52■□□□□ 0.39
LMNB1-201ENST00000261366 STXBP3O00186 592 aa17.52■□□□□ 0.39
LMNB1-201ENST00000261366 TLR2O60603 784 aa17.52■□□□□ 0.39
LMNB1-201ENST00000261366 PDHBP11177 359 aa17.52■□□□□ 0.39
LMNB1-201ENST00000261366 E2F5Q15329 346 aa17.52■□□□□ 0.39
LMNB1-201ENST00000261366 QPCTQ16769 361 aa17.52■□□□□ 0.39
LMNB1-201ENST00000261366 HGSNATQ68CP4 663 aa17.52■□□□□ 0.39
LMNB1-201ENST00000261366 ZNF572Q7Z3I7 529 aaPredicted RBP17.52■□□□□ 0.39
LMNB1-201ENST00000261366 CCDC84Q86UT8 332 aaPredicted RBP17.52■□□□□ 0.39
LMNB1-201ENST00000261366 FAM212AQ96EL1 285 aa17.52■□□□□ 0.39
LMNB1-201ENST00000261366 FAM84BQ96KN1 310 aaPredicted RBP17.52■□□□□ 0.39
LMNB1-201ENST00000261366 TRIM31Q9BZY9 425 aa17.52■□□□□ 0.39
LMNB1-201ENST00000261366 KLC4Q9NSK0 619 aa17.52■□□□□ 0.39
LMNB1-201ENST00000261366 MAD2L2Q9UI95 211 aa17.52■□□□□ 0.39
LMNB1-201ENST00000261366 A0A087X0T9 212 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 CEP104O60308 925 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 FAM228BP0C875 321 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 KCNMA1Q12791 1236 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 SLC9C1Q4G0N8 1177 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 CENPPQ6IPU0 288 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 TMED8Q6PL24 325 aaPredicted RBP17.51■□□□□ 0.39
LMNB1-201ENST00000261366 TBCKQ8TEA7 893 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 ZKSCAN4Q969J2 545 aaPredicted RBP17.51■□□□□ 0.39
LMNB1-201ENST00000261366 C7orf25Q9BPX7 421 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 NUDT12Q9BQG2 462 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 CDCA7Q9BWT1 371 aaPredicted RBP17.51■□□□□ 0.39
LMNB1-201ENST00000261366 SAP30BPQ9UHR5 308 aaKnown RBP17.51■□□□□ 0.39
LMNB1-201ENST00000261366 CICQ96RK0 1608 aaPredicted RBP17.51■□□□□ 0.39
LMNB1-201ENST00000261366 FRMD3A2A2Y4 597 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 SMCO2A6NFE2 343 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 FSBPO95073 299 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 TSPY3P0CV98 308 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 TSPY8P0CW00 308 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 HNRNPH3P31942 346 aaKnown RBP17.51■□□□□ 0.39
LMNB1-201ENST00000261366 CTNNA1P35221 906 aaKnown RBP17.51■□□□□ 0.39
LMNB1-201ENST00000261366 AMPD3Q01432 767 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 ITGB3BPQ13352 177 aaPredicted RBP17.51■□□□□ 0.39
LMNB1-201ENST00000261366 FAM83BQ5T0W9 1011 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 SFMBT2Q5VUG0 894 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 CHADLQ6NUI6 762 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 CCDC121Q6ZUS5 278 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 GIMAP7Q8NHV1 300 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 CYFIP2Q96F07 1278 aa17.51■□□□□ 0.39
LMNB1-201ENST00000261366 DCDC2CA8MYV0 355 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 M0R2N6 131 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 ORC4O43929 436 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 MYL1P05976 194 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 FLT3P36888 993 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 CDR1P51861 262 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 ERVK-9P63128 1117 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 DDX47Q9H0S4 455 aaKnown RBP17.5■□□□□ 0.39
LMNB1-201ENST00000261366 SLC40A1Q9NP59 571 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.5■□□□□ 0.39
LMNB1-201ENST00000261366 COL16A1Q07092 1604 aaPredicted RBP17.5■□□□□ 0.39
LMNB1-201ENST00000261366 BCORQ6W2J9 1755 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 TMCO5BA8MYB1 307 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 GCOM1H8Y6P7 765 aaPredicted RBP17.5■□□□□ 0.39
LMNB1-201ENST00000261366 MYZAPP0CAP1 466 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 HSD17B3P37058 310 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 NONOQ15233 471 aaKnown RBP eCLIP17.5■□□□□ 0.399e-7■■□□□ 12.5
LMNB1-201ENST00000261366 USP17L2Q6R6M4 530 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 KIRREL3Q8IZU9 778 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 ZHX3Q9H4I2 956 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 HAUS2Q9NVX0 235 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 BARHL2Q9NY43 387 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 KLRF2D3W0D1 207 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 GSCP56915 257 aaPredicted RBP17.5■□□□□ 0.39
LMNB1-201ENST00000261366 KCNK18Q7Z418 384 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 TAF4BQ92750 862 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 UBA5Q9GZZ9 404 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 NEUROG2Q9H2A3 272 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 LRRC4CQ9HCJ2 640 aa17.5■□□□□ 0.39
LMNB1-201ENST00000261366 THRAP3Q9Y2W1 955 aaKnown RBP17.5■□□□□ 0.39
LMNB1-201ENST00000261366 CCDC172P0C7W6 258 aa17.49■□□□□ 0.39
LMNB1-201ENST00000261366 GRB10Q13322 594 aa17.49■□□□□ 0.39
LMNB1-201ENST00000261366 FAM98CQ17RN3 349 aaKnown RBP17.49■□□□□ 0.39
LMNB1-201ENST00000261366 ASTE1Q2TB18 679 aaPredicted RBP17.49■□□□□ 0.39
LMNB1-201ENST00000261366 FGFBP2Q9BYJ0 223 aa17.49■□□□□ 0.39
LMNB1-201ENST00000261366 BLOC1S4Q9NUP1 217 aa17.49■□□□□ 0.39
LMNB1-201ENST00000261366 DOCK2Q92608 1830 aa17.49■□□□□ 0.39
LMNB1-201ENST00000261366 OPLAHO14841 1288 aa17.49■□□□□ 0.39
LMNB1-201ENST00000261366 CAMTA2O94983 1202 aa17.49■□□□□ 0.39
LMNB1-201ENST00000261366 FAM107AO95990 144 aa17.49■□□□□ 0.39
LMNB1-201ENST00000261366 FGRP09769 529 aa17.49■□□□□ 0.39
LMNB1-201ENST00000261366 KLHL30Q0D2K2 578 aa17.49■□□□□ 0.39
LMNB1-201ENST00000261366 GLE1Q53GS7 698 aaKnown RBP17.49■□□□□ 0.39
LMNB1-201ENST00000261366 LARP4BQ92615 738 aaKnown RBP17.49■□□□□ 0.39
LMNB1-201ENST00000261366 CELF1Q92879 486 aaKnown RBP17.49■□□□□ 0.39
LMNB1-201ENST00000261366 VCPKMTQ9H867 229 aa17.49■□□□□ 0.39
LMNB1-201ENST00000261366 NOVA2Q9UNW9 492 aaKnown RBP17.49■□□□□ 0.39
LMNB1-201ENST00000261366 PHF20L1A8MW92 1017 aa17.48■□□□□ 0.39
LMNB1-201ENST00000261366 LCA5LO95447 670 aa17.48■□□□□ 0.39
LMNB1-201ENST00000261366 ADAT2Q7Z6V5 191 aaKnown RBP17.48■□□□□ 0.39
LMNB1-201ENST00000261366 NEK8Q86SG6 692 aa17.48■□□□□ 0.39
LMNB1-201ENST00000261366 SLC51AQ86UW1 340 aa17.48■□□□□ 0.39
LMNB1-201ENST00000261366 DDX12PQ92771 950 aa17.48■□□□□ 0.39
LMNB1-201ENST00000261366 DPH5Q9H2P9 285 aa17.48■□□□□ 0.39
LMNB1-201ENST00000261366 DDX20Q9UHI6 824 aaKnown RBP17.48■□□□□ 0.39
LMNB1-201ENST00000261366 COL4A1P02462 1669 aa17.48■□□□□ 0.39
LMNB1-201ENST00000261366 SPATA31A5Q5VU36 1347 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms