RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 FBXO2Q9UK22 296 aaPredicted RBP17.64■□□□□ 0.41
GYPC-201ENST00000259254 PCDHA7Q9UN72 937 aa17.64■□□□□ 0.41
GYPC-201ENST00000259254 TNRC18O15417 2968 aaPredicted RBP17.64■□□□□ 0.41
GYPC-201ENST00000259254 CENPFP49454 3210 aa17.63■□□□□ 0.41
GYPC-201ENST00000259254 POTEFA5A3E0 1075 aa17.63■□□□□ 0.41
GYPC-201ENST00000259254 MEIS1O00470 390 aa17.63■□□□□ 0.41
GYPC-201ENST00000259254 CUTAO60888 179 aa17.63■□□□□ 0.41
GYPC-201ENST00000259254 EIF3JO75822 258 aaKnown RBP17.63■□□□□ 0.41
GYPC-201ENST00000259254 CYP2B6P20813 491 aa17.63■□□□□ 0.41
GYPC-201ENST00000259254 PTMSP20962 102 aa17.63■□□□□ 0.41
GYPC-201ENST00000259254 EDNRBP24530 442 aa17.63■□□□□ 0.41
GYPC-201ENST00000259254 HOXD10P28358 340 aa17.63■□□□□ 0.41
GYPC-201ENST00000259254 PRPHP41219 470 aa17.63■□□□□ 0.41
GYPC-201ENST00000259254 NFKBIBQ15653 356 aa17.63■□□□□ 0.41
GYPC-201ENST00000259254 TMEM266Q2M3C6 531 aa17.63■□□□□ 0.41
GYPC-201ENST00000259254 ARL6IP4Q66PJ3 421 aaKnown RBP17.63■□□□□ 0.41
GYPC-201ENST00000259254 EEPD1Q7L9B9 569 aa17.63■□□□□ 0.41
GYPC-201ENST00000259254 SLFN12Q8IYM2 578 aa17.63■□□□□ 0.41
GYPC-201ENST00000259254 LENG9Q96B70 501 aa17.63■□□□□ 0.41
GYPC-201ENST00000259254 MAML3Q96JK9 1138 aa17.63■□□□□ 0.41
GYPC-201ENST00000259254 CLIC6Q96NY7 704 aa17.63■□□□□ 0.41
GYPC-201ENST00000259254 ZNF577Q9BSK1 485 aa17.63■□□□□ 0.41
GYPC-201ENST00000259254 WDR11Q9BZH6 1224 aa17.63■□□□□ 0.41
GYPC-201ENST00000259254 DIS3Q9Y2L1 958 aaKnown RBP17.63■□□□□ 0.41
GYPC-201ENST00000259254 SRPRBQ9Y5M8 271 aaKnown RBP17.63■□□□□ 0.41
GYPC-201ENST00000259254 SMCHD1A6NHR9 2005 aa17.62■□□□□ 0.41
GYPC-201ENST00000259254 LOC102724159A0A0B4J2E5 919 aa17.62■□□□□ 0.41
GYPC-201ENST00000259254 TBX3O15119 743 aa17.62■□□□□ 0.41
GYPC-201ENST00000259254 MSH4O15457 936 aa17.62■□□□□ 0.41
GYPC-201ENST00000259254 GADD45BO75293 160 aaPredicted RBP17.62■□□□□ 0.41
GYPC-201ENST00000259254 ARP10275 920 aa17.62■□□□□ 0.41
GYPC-201ENST00000259254 PWP2Q15269 919 aaKnown RBP17.62■□□□□ 0.41
GYPC-201ENST00000259254 SEPT14Q6ZU15 432 aa17.62■□□□□ 0.41
GYPC-201ENST00000259254 ARMCX2Q7L311 632 aa17.62■□□□□ 0.41
GYPC-201ENST00000259254 ZNF467Q7Z7K2 595 aaPredicted RBP17.62■□□□□ 0.41
GYPC-201ENST00000259254 NPLOC4Q8TAT6 608 aa17.62■□□□□ 0.41
GYPC-201ENST00000259254 GJA10Q969M2 543 aa17.62■□□□□ 0.41
GYPC-201ENST00000259254 GPRASP2Q96D09 838 aa17.62■□□□□ 0.41
GYPC-201ENST00000259254 FAM20AQ96MK3 541 aa17.62■□□□□ 0.41
GYPC-201ENST00000259254 MTMR9Q96QG7 549 aa17.62■□□□□ 0.41
GYPC-201ENST00000259254 APBA2Q99767 749 aa17.62■□□□□ 0.41
GYPC-201ENST00000259254 KCNMB3Q9NPA1 279 aa17.62■□□□□ 0.41
GYPC-201ENST00000259254 LMBRD1Q9NUN5 540 aa17.62■□□□□ 0.41
GYPC-201ENST00000259254 MORC2Q9Y6X9 1032 aaPredicted RBP17.62■□□□□ 0.41
GYPC-201ENST00000259254 KIAA0100Q14667 2235 aaKnown RBP17.62■□□□□ 0.41
GYPC-201ENST00000259254 DOCK3Q8IZD9 2030 aa17.61■□□□□ 0.41
GYPC-201ENST00000259254 UBE2HP62256 183 aa17.61■□□□□ 0.41
GYPC-201ENST00000259254 ETNPPLQ8TBG4 499 aa17.61■□□□□ 0.41
GYPC-201ENST00000259254 SH3TC2Q8TF17 1288 aa17.61■□□□□ 0.41
GYPC-201ENST00000259254 HAS1Q92839 578 aa17.61■□□□□ 0.41
GYPC-201ENST00000259254 CDHR1Q96JP9 859 aa17.61■□□□□ 0.41
GYPC-201ENST00000259254 INPP4AQ96PE3 977 aaPredicted RBP17.61■□□□□ 0.41
GYPC-201ENST00000259254 CSRNP2Q9H175 543 aa17.61■□□□□ 0.41
GYPC-201ENST00000259254 TTC12Q9H892 705 aaPredicted RBP17.61■□□□□ 0.41
GYPC-201ENST00000259254 KCNH7Q9NS40 1196 aa17.61■□□□□ 0.41
GYPC-201ENST00000259254 HOXC6P09630 235 aa17.6■□□□□ 0.41
GYPC-201ENST00000259254 TECP42680 631 aa17.6■□□□□ 0.41
GYPC-201ENST00000259254 PRKCZQ05513 592 aa17.6■□□□□ 0.41
GYPC-201ENST00000259254 GRIN1Q05586 938 aa17.6■□□□□ 0.41
GYPC-201ENST00000259254 LRCH2Q5VUJ6 765 aa17.6■□□□□ 0.41
GYPC-201ENST00000259254 FBXO16Q8IX29 292 aaPredicted RBP17.6■□□□□ 0.41
GYPC-201ENST00000259254 RAET1EQ8TD07 263 aa17.6■□□□□ 0.41
GYPC-201ENST00000259254 MORC4Q8TE76 937 aa17.6■□□□□ 0.41
GYPC-201ENST00000259254 USP6NLQ92738 828 aa17.6■□□□□ 0.41
GYPC-201ENST00000259254 TINF2Q9BSI4 451 aa17.6■□□□□ 0.41
GYPC-201ENST00000259254 TMEM106CQ9BVX2 250 aa17.6■□□□□ 0.41
GYPC-201ENST00000259254 RAB34Q9BZG1 259 aa17.6■□□□□ 0.41
GYPC-201ENST00000259254 AGO4Q9HCK5 861 aaKnown RBP17.6■□□□□ 0.41
GYPC-201ENST00000259254 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.6■□□□□ 0.41
GYPC-201ENST00000259254 TCEAL9Q9UHQ7 104 aa17.6■□□□□ 0.41
GYPC-201ENST00000259254 GJD2Q9UKL4 321 aa17.6■□□□□ 0.41
GYPC-201ENST00000259254 PCDHA12Q9UN75 941 aa17.6■□□□□ 0.41
GYPC-201ENST00000259254 PDE4DIPQ5VU43 2346 aa17.59■□□□□ 0.41
GYPC-201ENST00000259254 IPO5O00410 1097 aaKnown RBP17.59■□□□□ 0.41
GYPC-201ENST00000259254 MAFGO15525 162 aa17.59■□□□□ 0.41
GYPC-201ENST00000259254 GAS7O60861 476 aa17.59■□□□□ 0.41
GYPC-201ENST00000259254 LONP1P36776 959 aaKnown RBP17.59■□□□□ 0.41
GYPC-201ENST00000259254 FLT3LGP49771 235 aa17.59■□□□□ 0.41
GYPC-201ENST00000259254 IL17AQ16552 155 aa17.59■□□□□ 0.41
GYPC-201ENST00000259254 SPECC1Q5M775 1068 aa17.59■□□□□ 0.41
GYPC-201ENST00000259254 AXDND1Q5T1B0 1012 aaPredicted RBP17.59■□□□□ 0.41
GYPC-201ENST00000259254 ADALQ6DHV7 355 aa17.59■□□□□ 0.41
GYPC-201ENST00000259254 MSL3Q8N5Y2 521 aaKnown RBP17.59■□□□□ 0.41
GYPC-201ENST00000259254 FSIP1Q8NA03 581 aa17.59■□□□□ 0.41
GYPC-201ENST00000259254 SLC5A5Q92911 643 aa17.59■□□□□ 0.41
GYPC-201ENST00000259254 TEKT3Q9BXF9 490 aa17.59■□□□□ 0.41
GYPC-201ENST00000259254 FAM13BQ9NYF5 915 aa17.59■□□□□ 0.41
GYPC-201ENST00000259254 GABRQQ9UN88 632 aa17.59■□□□□ 0.41
GYPC-201ENST00000259254 SYNGAP1Q96PV0 1343 aa17.58■□□□□ 0.4
GYPC-201ENST00000259254 A0A1W2PQ27 194 aa17.58■□□□□ 0.4
GYPC-201ENST00000259254 A0A1W2PQ64 194 aa17.58■□□□□ 0.4
GYPC-201ENST00000259254 A0A1W2PQD8 194 aa17.58■□□□□ 0.4
GYPC-201ENST00000259254 SPATA31C2B4DYI2 1134 aa17.58■□□□□ 0.4
GYPC-201ENST00000259254 DDX39AO00148 427 aaKnown RBP17.58■□□□□ 0.4
GYPC-201ENST00000259254 RGS20O76081 388 aa17.58■□□□□ 0.4
GYPC-201ENST00000259254 FXR2P51116 673 aaKnown RBP eCLIP17.58■□□□□ 0.4
GYPC-201ENST00000259254 CCL14Q16627 93 aa17.58■□□□□ 0.4
GYPC-201ENST00000259254 NCAPH2Q6IBW4 605 aa17.58■□□□□ 0.4
GYPC-201ENST00000259254 MAMDC4Q6UXC1 1216 aa17.58■□□□□ 0.4
GYPC-201ENST00000259254 CCDC73Q6ZRK6 1079 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms