RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 CCT6BQ92526 530 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 HVCN1Q96D96 273 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 HOOK2Q96ED9 719 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 AK8Q96MA6 479 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 LRP2BPQ9P2M1 347 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 TMEM59LQ9UK28 342 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 PCDHGC5Q9Y5F6 944 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 MYH1P12882 1939 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 ANKRD36CQ5JPF3 1778 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 PP2D1A8MPX8 630 aa12.65□□□□□ -0.38
TROAP-201ENST00000257909 PDE8AO60658 829 aa12.65□□□□□ -0.38
TROAP-201ENST00000257909 E2F5Q15329 346 aa12.65□□□□□ -0.38
TROAP-201ENST00000257909 SPRED3Q2MJR0 410 aa12.65□□□□□ -0.38
TROAP-201ENST00000257909 TDRD12Q587J7 1177 aaKnown RBP12.65□□□□□ -0.38
TROAP-201ENST00000257909 CPLX4Q7Z7G2 160 aa12.65□□□□□ -0.38
TROAP-201ENST00000257909 NLRP10Q86W26 655 aa12.65□□□□□ -0.38
TROAP-201ENST00000257909 MAB21L3Q8N8X9 362 aa12.65□□□□□ -0.38
TROAP-201ENST00000257909 RAPGEF5Q92565 580 aa12.65□□□□□ -0.38
TROAP-201ENST00000257909 SYN2Q92777 582 aaPredicted RBP12.65□□□□□ -0.38
TROAP-201ENST00000257909 BATF3Q9NR55 127 aa12.65□□□□□ -0.38
TROAP-201ENST00000257909 TCP11L1Q9NUJ3 509 aa12.65□□□□□ -0.38
TROAP-201ENST00000257909 PCDHA4Q9UN74 947 aa12.65□□□□□ -0.38
TROAP-201ENST00000257909 RREB1Q92766 1687 aa12.65□□□□□ -0.38
TROAP-201ENST00000257909 CCDC194A0A1B0GVG4 234 aa12.65□□□□□ -0.38
TROAP-201ENST00000257909 RTN2O75298 545 aa12.65□□□□□ -0.38
TROAP-201ENST00000257909 FGRP09769 529 aa12.65□□□□□ -0.38
TROAP-201ENST00000257909 PAX7P23759 505 aa12.65□□□□□ -0.38
TROAP-201ENST00000257909 IRX1P78414 480 aaPredicted RBP12.65□□□□□ -0.38
TROAP-201ENST00000257909 BYSLQ13895 437 aaKnown RBP12.65□□□□□ -0.38
TROAP-201ENST00000257909 HGSNATQ68CP4 663 aa12.65□□□□□ -0.38
TROAP-201ENST00000257909 CRELD2Q6UXH1 353 aaPredicted RBP12.65□□□□□ -0.38
TROAP-201ENST00000257909 SDR42E1Q8WUS8 393 aa12.65□□□□□ -0.38
TROAP-201ENST00000257909 TAF4BQ92750 862 aa12.65□□□□□ -0.38
TROAP-201ENST00000257909 PLIN2Q99541 437 aa12.65□□□□□ -0.38
TROAP-201ENST00000257909 CNOT10Q9H9A5 744 aaKnown RBP12.65□□□□□ -0.38
TROAP-201ENST00000257909 ORC4O43929 436 aa12.64□□□□□ -0.39
TROAP-201ENST00000257909 SERPING1P05155 500 aa12.64□□□□□ -0.39
TROAP-201ENST00000257909 PLCG1P19174 1290 aa12.64□□□□□ -0.39
TROAP-201ENST00000257909 IBSPP21815 317 aaPredicted RBP12.64□□□□□ -0.39
TROAP-201ENST00000257909 CYP7A1P22680 504 aa12.64□□□□□ -0.39
TROAP-201ENST00000257909 TMOD1P28289 359 aa12.64□□□□□ -0.39
TROAP-201ENST00000257909 ECHS1P30084 290 aa12.64□□□□□ -0.39
TROAP-201ENST00000257909 TRADDQ15628 312 aa12.64□□□□□ -0.39
TROAP-201ENST00000257909 UAP1Q16222 522 aaPredicted RBP12.64□□□□□ -0.39
TROAP-201ENST00000257909 RCSD1Q6JBY9 416 aa12.64□□□□□ -0.39
TROAP-201ENST00000257909 HELBQ8NG08 1087 aaPredicted RBP12.64□□□□□ -0.39
TROAP-201ENST00000257909 SEMA6BQ9H3T3 888 aa12.64□□□□□ -0.39
TROAP-201ENST00000257909 MAGEB6P1A0A0J9YX57 407 aa12.64□□□□□ -0.39
TROAP-201ENST00000257909 ATP6V1G2O95670 118 aa12.64□□□□□ -0.39
TROAP-201ENST00000257909 FTCDO95954 541 aa12.64□□□□□ -0.39
TROAP-201ENST00000257909 FCER1AP12319 257 aa12.64□□□□□ -0.39
TROAP-201ENST00000257909 ERVK-9P63128 1117 aa12.64□□□□□ -0.39
TROAP-201ENST00000257909 ELF3P78545 371 aaPredicted RBP12.64□□□□□ -0.39
TROAP-201ENST00000257909 ZKSCAN8Q15776 578 aaPredicted RBP12.64□□□□□ -0.39
TROAP-201ENST00000257909 CABP7Q86V35 215 aa12.64□□□□□ -0.39
TROAP-201ENST00000257909 KLHL7Q8IXQ5 586 aa12.64□□□□□ -0.39
TROAP-201ENST00000257909 CUL5Q93034 780 aa12.64□□□□□ -0.39
TROAP-201ENST00000257909 CENPTQ96BT3 561 aa12.64□□□□□ -0.39
TROAP-201ENST00000257909 TMEM60Q9H2L4 133 aa12.64□□□□□ -0.39
TROAP-201ENST00000257909 LRP5O75197 1615 aa12.64□□□□□ -0.39
TROAP-201ENST00000257909 BAZ2BQ9UIF8 2168 aaKnown RBP12.64□□□□□ -0.39
TROAP-201ENST00000257909 NKRFO15226 690 aaKnown RBP eCLIP12.63□□□□□ -0.39
TROAP-201ENST00000257909 PPIP5K2O43314 1243 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 GSTA1P08263 222 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 HOXA7P31268 230 aaPredicted RBP12.63□□□□□ -0.39
TROAP-201ENST00000257909 KIF5BP33176 963 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 EHHADHQ08426 723 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 TMED8Q6PL24 325 aaPredicted RBP12.63□□□□□ -0.39
TROAP-201ENST00000257909 EGFL6Q8IUX8 553 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 STAG2Q8N3U4 1231 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 ANKS4BQ8N8V4 417 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 KIAA0895Q8NCT3 520 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 CCHCR1Q8TD31 782 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 PBKQ96KB5 322 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 CALR3Q96L12 384 aaKnown RBP12.63□□□□□ -0.39
TROAP-201ENST00000257909 NOD2Q9HC29 1040 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 FAM205AQ6ZU69 1335 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 ADAMTS3O15072 1205 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 DNA2P51530 1060 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 LRRC63Q05C16 580 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 RIPK1Q13546 671 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 SLMAPQ14BN4 828 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 NAA25Q14CX7 972 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 SFMBT2Q5VUG0 894 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 OR2W6PQ8NHA6 318 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 ZCRB1Q8TBF4 217 aaKnown RBP12.63□□□□□ -0.39
TROAP-201ENST00000257909 LRRC15Q8TF66 581 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 CHMP6Q96FZ7 201 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 BRIP1Q9BX63 1249 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 EBF2Q9HAK2 575 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 CEP72Q9P209 647 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 NOVA2Q9UNW9 492 aaKnown RBP12.63□□□□□ -0.39
TROAP-201ENST00000257909 FLT1P17948 1338 aa12.63□□□□□ -0.39
TROAP-201ENST00000257909 A0A0G2JS52 829 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 BHMG1C9JSJ3 638 aaPredicted RBP12.62□□□□□ -0.39
TROAP-201ENST00000257909 ZPR1O75312 459 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 TRIM37O94972 964 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 DRD4P21917 467 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 KLRC1P26715 233 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 GALNT17Q6IS24 598 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms