RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 TRAF5O00463 557 aa21.18■□□□□ 0.98
TRIM47-201ENST00000254816 STX17P56962 302 aa21.18■□□□□ 0.98
TRIM47-201ENST00000254816 CEP55Q53EZ4 464 aa21.18■□□□□ 0.98
TRIM47-201ENST00000254816 POTEBQ6S5H4 581 aa21.18■□□□□ 0.98
TRIM47-201ENST00000254816 PNMA8AQ86V59 439 aaPredicted RBP21.18■□□□□ 0.98
TRIM47-201ENST00000254816 FAM20AQ96MK3 541 aa21.18■□□□□ 0.98
TRIM47-201ENST00000254816 TRIM9Q9C026 710 aa21.18■□□□□ 0.98
TRIM47-201ENST00000254816 ZNF408Q9H9D4 720 aa21.18■□□□□ 0.98
TRIM47-201ENST00000254816 COBLO75128 1261 aa21.17■□□□□ 0.98
TRIM47-201ENST00000254816 MED24O75448 989 aa21.17■□□□□ 0.98
TRIM47-201ENST00000254816 ARP10275 920 aa21.17■□□□□ 0.98
TRIM47-201ENST00000254816 TPM4P67936 248 aa21.17■□□□□ 0.98
TRIM47-201ENST00000254816 GHRHRQ02643 423 aa21.17■□□□□ 0.98
TRIM47-201ENST00000254816 PPATQ06203 517 aa21.17■□□□□ 0.98
TRIM47-201ENST00000254816 RNF207Q6ZRF8 634 aa21.17■□□□□ 0.98
TRIM47-201ENST00000254816 SV2BQ7L1I2 683 aa21.17■□□□□ 0.98
TRIM47-201ENST00000254816 ERO1BQ86YB8 467 aa21.17■□□□□ 0.98
TRIM47-201ENST00000254816 RAD54LQ92698 747 aa21.17■□□□□ 0.98
TRIM47-201ENST00000254816 STK17AQ9UEE5 414 aa21.17■□□□□ 0.98
TRIM47-201ENST00000254816 VAV3Q9UKW4 847 aa21.17■□□□□ 0.98
TRIM47-201ENST00000254816 KIAA1024Q9UPX6 916 aa21.17■□□□□ 0.98
TRIM47-201ENST00000254816 MAPK8IP1Q9UQF2 711 aa21.17■□□□□ 0.98
TRIM47-201ENST00000254816 RPTORQ8N122 1335 aa21.17■□□□□ 0.98
TRIM47-201ENST00000254816 RMND1Q9NWS8 449 aa21.17■□□□□ 0.98
TRIM47-201ENST00000254816 HOXC10Q9NYD6 342 aa21.17■□□□□ 0.98
TRIM47-201ENST00000254816 MYMKA6NI61 221 aa21.16■□□□□ 0.98
TRIM47-201ENST00000254816 E9PMD0 336 aa21.16■□□□□ 0.98
TRIM47-201ENST00000254816 EIF2AK2P19525 551 aaKnown RBP21.16■□□□□ 0.98
TRIM47-201ENST00000254816 ZNF658Q5TYW1 1059 aaPredicted RBP21.16■□□□□ 0.98
TRIM47-201ENST00000254816 C7orf25Q9BPX7 421 aa21.16■□□□□ 0.98
TRIM47-201ENST00000254816 SPDYE5A6NIY4 337 aa21.16■□□□□ 0.98
TRIM47-201ENST00000254816 MYL1P05976 194 aa21.16■□□□□ 0.98
TRIM47-201ENST00000254816 ASIC1P78348 528 aa21.16■□□□□ 0.98
TRIM47-201ENST00000254816 BAATQ14032 418 aaPredicted RBP21.16■□□□□ 0.98
TRIM47-201ENST00000254816 CCDC144BQ3MJ40 725 aa21.16■□□□□ 0.98
TRIM47-201ENST00000254816 POTEEQ6S8J3 1075 aa21.16■□□□□ 0.98
TRIM47-201ENST00000254816 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.16■□□□□ 0.98
TRIM47-201ENST00000254816 CTNND2Q9UQB3 1225 aa21.16■□□□□ 0.98
TRIM47-201ENST00000254816 A0A0G2JLL6 359 aaPredicted RBP21.15■□□□□ 0.98
TRIM47-201ENST00000254816 EML1O00423 815 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 MEIS1O00470 390 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 ITGB5P18084 799 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 OAZ1P54368 228 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 HYIQ5T013 277 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 DYMQ7RTS9 669 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 PRRT2Q7Z6L0 340 aaPredicted RBP21.15■□□□□ 0.98
TRIM47-201ENST00000254816 ENOX1Q8TC92 643 aaKnown RBP21.15■□□□□ 0.98
TRIM47-201ENST00000254816 OPTNQ96CV9 577 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 MXRA8Q9BRK3 442 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 PNMA2Q9UL42 364 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 NFE2L3Q9Y4A8 694 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 KDM3AQ9Y4C1 1321 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 POTEFA5A3E0 1075 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 CHMP2AO43633 222 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 RBM10P98175 930 aaKnown RBP21.15■□□□□ 0.98
TRIM47-201ENST00000254816 AMPD3Q01432 767 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 LRCH2Q5VUJ6 765 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 POTEGQ6S5H5 508 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 ARMC9Q7Z3E5 817 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 CATSPER3Q86XQ3 398 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 WDR11Q9BZH6 1224 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 PKD2L1Q9P0L9 805 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 IFNKQ9P0W0 207 aa21.15■□□□□ 0.98
TRIM47-201ENST00000254816 LCTP09848 1927 aa21.14■□□□□ 0.97
TRIM47-201ENST00000254816 PRKCSHP14314 528 aaPredicted RBP21.14■□□□□ 0.97
TRIM47-201ENST00000254816 ERCC5P28715 1186 aaPredicted RBP21.14■□□□□ 0.97
TRIM47-201ENST00000254816 MRPS9P82933 396 aaKnown RBP21.14■□□□□ 0.97
TRIM47-201ENST00000254816 SLC5A5Q92911 643 aa21.14■□□□□ 0.97
TRIM47-201ENST00000254816 ZNF577Q9BSK1 485 aa21.14■□□□□ 0.97
TRIM47-201ENST00000254816 TEX13BQ9BXU2 312 aa21.14■□□□□ 0.97
TRIM47-201ENST00000254816 MAP3K20Q9NYL2 800 aaKnown RBP21.14■□□□□ 0.97
TRIM47-201ENST00000254816 A0A0G2JMZ2 1700 aa21.14■□□□□ 0.97
TRIM47-201ENST00000254816 SYNRGQ9UMZ2 1314 aa21.13■□□□□ 0.97
TRIM47-201ENST00000254816 PSMD10O75832 226 aa21.13■□□□□ 0.97
TRIM47-201ENST00000254816 SSBP05455 408 aaKnown RBP eCLIP21.13■□□□□ 0.97
TRIM47-201ENST00000254816 MYCLP12524 364 aaPredicted RBP21.13■□□□□ 0.97
TRIM47-201ENST00000254816 PRCPP42785 496 aa21.13■□□□□ 0.97
TRIM47-201ENST00000254816 FANCCQ00597 558 aa21.13■□□□□ 0.97
TRIM47-201ENST00000254816 CYP4A11Q02928 519 aa21.13■□□□□ 0.97
TRIM47-201ENST00000254816 KCNB1Q14721 858 aa21.13■□□□□ 0.97
TRIM47-201ENST00000254816 PGM5Q15124 567 aa21.13■□□□□ 0.97
TRIM47-201ENST00000254816 OTOP1Q7RTM1 612 aa21.13■□□□□ 0.97
TRIM47-201ENST00000254816 HPS3Q969F9 1004 aa21.13■□□□□ 0.97
TRIM47-201ENST00000254816 RMDN3Q96TC7 470 aa21.13■□□□□ 0.97
TRIM47-201ENST00000254816 NT5C3AQ9H0P0 336 aa21.13■□□□□ 0.97
TRIM47-201ENST00000254816 RRAGCQ9HB90 399 aa21.13■□□□□ 0.97
TRIM47-201ENST00000254816 SAMSN1Q9NSI8 373 aaKnown RBP21.13■□□□□ 0.97
TRIM47-201ENST00000254816 MYPNQ86TC9 1320 aa21.13■□□□□ 0.97
TRIM47-201ENST00000254816 KIAA1217Q5T5P2 1943 aa21.13■□□□□ 0.97
TRIM47-201ENST00000254816 RHOBTB3O94955 611 aa21.13■□□□□ 0.97
TRIM47-201ENST00000254816 SPATA31C1P0DKV0 1188 aa21.13■□□□□ 0.97
TRIM47-201ENST00000254816 PDE4DQ08499 809 aa21.13■□□□□ 0.97
TRIM47-201ENST00000254816 HAUS3Q68CZ6 603 aa21.13■□□□□ 0.97
TRIM47-201ENST00000254816 XPO4Q9C0E2 1151 aaKnown RBP21.13■□□□□ 0.97
TRIM47-201ENST00000254816 PXMP2Q9NR77 195 aa21.13■□□□□ 0.97
TRIM47-201ENST00000254816 ATP2A1O14983 1001 aa21.12■□□□□ 0.97
TRIM47-201ENST00000254816 PCNX4Q63HM2 1172 aa21.12■□□□□ 0.97
TRIM47-201ENST00000254816 ERMNQ8TAM6 284 aa21.12■□□□□ 0.97
TRIM47-201ENST00000254816 MRFAP1L1Q96HT8 127 aa21.12■□□□□ 0.97
TRIM47-201ENST00000254816 RGL1Q9NZL6 768 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms