RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 MTIF2P46199 727 aaKnown RBP13.01□□□□□ -0.33
LIN28A-201ENST00000254231 RCAN1P53805 252 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 IRX5P78411 483 aaPredicted RBP13.01□□□□□ -0.33
LIN28A-201ENST00000254231 TMEM63BQ5T3F8 832 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 CEP135Q66GS9 1140 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 LRRC15Q8TF66 581 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 NELFBQ8WX92 580 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 LARP4BQ92615 738 aaKnown RBP13.01□□□□□ -0.33
LIN28A-201ENST00000254231 GLG1Q92896 1179 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 LENG1Q96BZ8 264 aaPredicted RBP13.01□□□□□ -0.33
LIN28A-201ENST00000254231 MTRQ99707 1265 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 KCNH7Q9NS40 1196 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 IVNS1ABPQ9Y6Y0 642 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 DPP9Q86TI2 863 aa13□□□□□ -0.33
LIN28A-201ENST00000254231 ZIC5Q96T25 663 aa13□□□□□ -0.33
LIN28A-201ENST00000254231 ASCC2Q9H1I8 757 aaPredicted RBP13□□□□□ -0.33
LIN28A-201ENST00000254231 SH3GLB2Q9NR46 395 aa13□□□□□ -0.33
LIN28A-201ENST00000254231 ZHX1Q9UKY1 873 aaPredicted RBP13□□□□□ -0.33
LIN28A-201ENST00000254231 ESPNB1AK53 854 aa13□□□□□ -0.33
LIN28A-201ENST00000254231 ACTN4O43707 911 aaKnown RBP13□□□□□ -0.33
LIN28A-201ENST00000254231 CYP2B6P20813 491 aa13□□□□□ -0.33
LIN28A-201ENST00000254231 PRCPP42785 496 aa13□□□□□ -0.33
LIN28A-201ENST00000254231 CEP55Q53EZ4 464 aa13□□□□□ -0.33
LIN28A-201ENST00000254231 TRIM50Q86XT4 487 aa13□□□□□ -0.33
LIN28A-201ENST00000254231 KIFC3Q9BVG8 833 aa13□□□□□ -0.33
LIN28A-201ENST00000254231 TXNRD2Q9NNW7 524 aa13□□□□□ -0.33
LIN28A-201ENST00000254231 GPRC5CQ9NQ84 441 aa13□□□□□ -0.33
LIN28A-201ENST00000254231 DNM3Q9UQ16 869 aa13□□□□□ -0.33
LIN28A-201ENST00000254231 PRPF6O94906 941 aaKnown RBP13□□□□□ -0.33
LIN28A-201ENST00000254231 BMP15O95972 392 aa13□□□□□ -0.33
LIN28A-201ENST00000254231 NLRX1Q86UT6 975 aa13□□□□□ -0.33
LIN28A-201ENST00000254231 FAM160B2Q86V87 743 aa13□□□□□ -0.33
LIN28A-201ENST00000254231 SYCP3Q8IZU3 236 aa13□□□□□ -0.33
LIN28A-201ENST00000254231 GMCL1P1Q8NEA9 526 aa13□□□□□ -0.33
LIN28A-201ENST00000254231 WDR18Q9BV38 432 aa13□□□□□ -0.33
LIN28A-201ENST00000254231 BTBD7Q9P203 1132 aa13□□□□□ -0.33
LIN28A-201ENST00000254231 MYMKA6NI61 221 aa12.99□□□□□ -0.33
LIN28A-201ENST00000254231 GCNT3O95395 438 aa12.99□□□□□ -0.33
LIN28A-201ENST00000254231 NR3C2P08235 984 aa12.99□□□□□ -0.33
LIN28A-201ENST00000254231 FANCCQ00597 558 aa12.99□□□□□ -0.33
LIN28A-201ENST00000254231 COPS5Q92905 334 aa12.99□□□□□ -0.33
LIN28A-201ENST00000254231 KIAA1683Q9H0B3 1180 aa12.99□□□□□ -0.33
LIN28A-201ENST00000254231 PORCNQ9H237 461 aa12.99□□□□□ -0.33
LIN28A-201ENST00000254231 PCIF1Q9H4Z3 704 aa12.99□□□□□ -0.33
LIN28A-201ENST00000254231 GBA2Q9HCG7 927 aaPredicted RBP12.99□□□□□ -0.33
LIN28A-201ENST00000254231 ITGB5P18084 799 aa12.99□□□□□ -0.33
LIN28A-201ENST00000254231 LONP1P36776 959 aaKnown RBP12.99□□□□□ -0.33
LIN28A-201ENST00000254231 MYL5Q02045 173 aa12.99□□□□□ -0.33
LIN28A-201ENST00000254231 TMEM62Q0P6H9 643 aa12.99□□□□□ -0.33
LIN28A-201ENST00000254231 XKR9Q5GH70 373 aa12.99□□□□□ -0.33
LIN28A-201ENST00000254231 SWSAP1Q6NVH7 229 aa12.99□□□□□ -0.33
LIN28A-201ENST00000254231 CATSPER3Q86XQ3 398 aa12.99□□□□□ -0.33
LIN28A-201ENST00000254231 METTL13Q8N6R0 699 aa12.99□□□□□ -0.33
LIN28A-201ENST00000254231 SYTL5Q8TDW5 730 aaPredicted RBP12.99□□□□□ -0.33
LIN28A-201ENST00000254231 A1CFQ9NQ94 594 aaKnown RBP12.99□□□□□ -0.33
LIN28A-201ENST00000254231 HOXC10Q9NYD6 342 aa12.99□□□□□ -0.33
LIN28A-201ENST00000254231 PCDHB13Q9Y5F0 798 aa12.99□□□□□ -0.33
LIN28A-201ENST00000254231 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.99□□□□□ -0.33
LIN28A-201ENST00000254231 TBCAO75347 108 aaKnown RBP12.98□□□□□ -0.33
LIN28A-201ENST00000254231 PLA2G4BP0C869 781 aa12.98□□□□□ -0.33
LIN28A-201ENST00000254231 KCTD2Q14681 263 aa12.98□□□□□ -0.33
LIN28A-201ENST00000254231 DCAF17Q5H9S7 520 aaPredicted RBP12.98□□□□□ -0.33
LIN28A-201ENST00000254231 CYP4F22Q6NT55 531 aa12.98□□□□□ -0.33
LIN28A-201ENST00000254231 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.98□□□□□ -0.33
LIN28A-201ENST00000254231 C16orf45Q96MC5 204 aaPredicted RBP12.98□□□□□ -0.33
LIN28A-201ENST00000254231 TEX13BQ9BXU2 312 aa12.98□□□□□ -0.33
LIN28A-201ENST00000254231 MRPL44Q9H9J2 332 aaKnown RBP12.98□□□□□ -0.33
LIN28A-201ENST00000254231 MLXIPQ9HAP2 919 aa12.98□□□□□ -0.33
LIN28A-201ENST00000254231 ICAM1P05362 532 aa12.98□□□□□ -0.33
LIN28A-201ENST00000254231 DPYDQ12882 1025 aa12.98□□□□□ -0.33
LIN28A-201ENST00000254231 KCTD19Q17RG1 926 aaPredicted RBP12.98□□□□□ -0.33
LIN28A-201ENST00000254231 MTERF2Q49AM1 385 aa12.98□□□□□ -0.33
LIN28A-201ENST00000254231 ZC2HC1CQ53FD0 456 aaPredicted RBP12.98□□□□□ -0.33
LIN28A-201ENST00000254231 FAM102BQ5T8I3 360 aa12.98□□□□□ -0.33
LIN28A-201ENST00000254231 TMED8Q6PL24 325 aaPredicted RBP12.98□□□□□ -0.33
LIN28A-201ENST00000254231 CSGALNACT2Q8N6G5 542 aa12.98□□□□□ -0.33
LIN28A-201ENST00000254231 MAGEC2Q9UBF1 373 aaPredicted RBP12.98□□□□□ -0.33
LIN28A-201ENST00000254231 SPDYE16A6NNV3 312 aaPredicted RBP12.98□□□□□ -0.33
LIN28A-201ENST00000254231 TEX33O43247 280 aa12.98□□□□□ -0.33
LIN28A-201ENST00000254231 TRAPPC10P48553 1259 aa12.98□□□□□ -0.33
LIN28A-201ENST00000254231 HERVK_113P62684 666 aa12.98□□□□□ -0.33
LIN28A-201ENST00000254231 FBXO16Q8IX29 292 aaPredicted RBP12.98□□□□□ -0.33
LIN28A-201ENST00000254231 CCAR2Q8N163 923 aaKnown RBP12.98□□□□□ -0.33
LIN28A-201ENST00000254231 CCDC155Q8N6L0 562 aa12.98□□□□□ -0.33
LIN28A-201ENST00000254231 EIF2AK1Q9BQI3 630 aaKnown RBP12.98□□□□□ -0.33
LIN28A-201ENST00000254231 NOP56O00567 594 aaKnown RBP12.97□□□□□ -0.33
LIN28A-201ENST00000254231 PMS1P54277 932 aaKnown RBP12.97□□□□□ -0.33
LIN28A-201ENST00000254231 OSTNP61366 133 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 KCNA1Q09470 495 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 STIM1Q13586 685 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 LY6KQ17RY6 165 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 CCDC144BQ3MJ40 725 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 DHX40Q8IX18 779 aaKnown RBP12.97□□□□□ -0.33
LIN28A-201ENST00000254231 ERMNQ8TAM6 284 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 PANK4Q9NVE7 773 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 SYNRGQ9UMZ2 1314 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 ARHGEF35A5YM69 484 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 FAM13AO94988 1023 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 CYP2J2P51589 502 aa12.97□□□□□ -0.33
LIN28A-201ENST00000254231 GRB10Q13322 594 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms