RNA–Protein interactions for RNA: ENST00000248151.4

TUBBP1-201, Transcript of tubulin beta pseudogene 1, humanhuman

BASIC

Gene TUBBP1, Length 1,335 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP1-201ENST00000248151 UBE2Q1Q7Z7E8 422 aa12.67□□□□□ -0.38
TUBBP1-201ENST00000248151 NLRX1Q86UT6 975 aa12.67□□□□□ -0.38
TUBBP1-201ENST00000248151 DHX37Q8IY37 1157 aaKnown RBP12.67□□□□□ -0.38
TUBBP1-201ENST00000248151 ANKLE1Q8NAG6 615 aa12.67□□□□□ -0.38
TUBBP1-201ENST00000248151 DAGLBQ8NCG7 672 aa12.67□□□□□ -0.38
TUBBP1-201ENST00000248151 TBCKQ8TEA7 893 aa12.67□□□□□ -0.38
TUBBP1-201ENST00000248151 AFG1LQ8WV93 481 aa12.67□□□□□ -0.38
TUBBP1-201ENST00000248151 VTI1AQ96AJ9 217 aa12.67□□□□□ -0.38
TUBBP1-201ENST00000248151 C8orf76Q96K31 380 aa12.67□□□□□ -0.38
TUBBP1-201ENST00000248151 INPP4AQ96PE3 977 aaPredicted RBP12.67□□□□□ -0.38
TUBBP1-201ENST00000248151 SPC25Q9HBM1 224 aa12.67□□□□□ -0.38
TUBBP1-201ENST00000248151 JADE2Q9NQC1 790 aa12.67□□□□□ -0.38
TUBBP1-201ENST00000248151 TRIP12Q14669 1992 aaPredicted RBP12.67□□□□□ -0.38
TUBBP1-201ENST00000248151 WDR81Q562E7 1941 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 FAM86B1E9PN63 330 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 DNM1LO00429 736 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 GH1P01241 217 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 MMP1P03956 469 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 MYL3P08590 195 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 FAM86B2P0C5J1 330 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 ICAM3P32942 547 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 KRT2P35908 639 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 ACLYP53396 1101 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 CHMP4BP1P59074 171 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 SP4Q02446 784 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 ARHGAP1Q07960 439 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 TRIM29Q14134 588 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 FSCN1Q16658 493 aaKnown RBP12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 INF2Q27J81 1249 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 CELF3Q5SZQ8 465 aaKnown RBP12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 XRRA1Q6P2D8 792 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 CXCL17Q6UXB2 119 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 PIK3AP1Q6ZUJ8 805 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 CYFIP1Q7L576 1253 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 SPRYD3Q8NCJ5 442 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 CRYGNQ8WXF5 182 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 GJA10Q969M2 543 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 MLXIPQ9HAP2 919 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 SMC3Q9UQE7 1217 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 Q9Y3F1 56 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 DNAH12Q6ZR08 3092 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 KAT6AQ92794 2004 aa12.66□□□□□ -0.38
TUBBP1-201ENST00000248151 NKRFO15226 690 aaKnown RBP eCLIP12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 FIBPO43427 364 aa12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 STAM2O75886 525 aa12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 CYP3A4P08684 503 aa12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 COL6A1P12109 1028 aa12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 UBA1P22314 1058 aaKnown RBP12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 PSMC6P62333 389 aa12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 HMGN5P82970 282 aaKnown RBP12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 MTMR1Q13613 665 aa12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 CUL4AQ13619 759 aa12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 NONOQ15233 471 aaKnown RBP eCLIP12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 HSDL1Q3SXM5 330 aa12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 GNPTABQ3T906 1256 aa12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 CEP55Q53EZ4 464 aa12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 PRR16Q569H4 304 aa12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 MYSM1Q5VVJ2 828 aa12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 GALNT17Q6IS24 598 aa12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 SLC39A5Q6ZMH5 540 aa12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 PLA2G4DQ86XP0 818 aa12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 DIS3L2Q8IYB7 885 aaKnown RBP12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 IL27Q8NEV9 243 aa12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 DPF3Q92784 378 aa12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 KCNH7Q9NS40 1196 aa12.65□□□□□ -0.38
TUBBP1-201ENST00000248151 CCDC194A0A1B0GVG4 234 aa12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 A0A1W2PQ45 241 aaPredicted RBP12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 A0A1W2PQY0 241 aa12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 K7ELQ4 463 aaPredicted RBP12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 DDX39AO00148 427 aaKnown RBP12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 MEIS1O00470 390 aa12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 TDP2O95551 362 aa12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 TGFB3P10600 412 aa12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 KCNA2P16389 499 aa12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 ATP2B1P20020 1258 aa12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 MLLT1Q03111 559 aaPredicted RBP12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 LAMC2Q13753 1193 aa12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 LRRC26Q2I0M4 334 aa12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 MCTP2Q6DN12 878 aa12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 KCNV1Q6PIU1 500 aa12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 FBXO18Q8NFZ0 1043 aa12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 TNFRSF25Q93038 417 aa12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 SNX21Q969T3 373 aa12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 GPRASP2Q96D09 838 aa12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 SPATA33Q96N06 139 aa12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 TSEN34Q9BSV6 310 aaKnown RBP12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 PHF24Q9UPV7 400 aa12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 MYH9P35579 1960 aaKnown RBP12.64□□□□□ -0.39
TUBBP1-201ENST00000248151 IGLV3-22A0A075B6J6 115 aa12.63□□□□□ -0.39
TUBBP1-201ENST00000248151 A6NJR5 290 aa12.63□□□□□ -0.39
TUBBP1-201ENST00000248151 WNT7AO00755 349 aa12.63□□□□□ -0.39
TUBBP1-201ENST00000248151 CST5P28325 142 aaPredicted RBP12.63□□□□□ -0.39
TUBBP1-201ENST00000248151 USP11P51784 963 aa12.63□□□□□ -0.39
TUBBP1-201ENST00000248151 NKX3-2P78367 333 aa12.63□□□□□ -0.39
TUBBP1-201ENST00000248151 LETM2Q2VYF4 491 aa12.63□□□□□ -0.39
TUBBP1-201ENST00000248151 KRT25Q7Z3Z0 450 aa12.63□□□□□ -0.39
TUBBP1-201ENST00000248151 PCSK9Q8NBP7 692 aaKnown RBP12.63□□□□□ -0.39
TUBBP1-201ENST00000248151 AGO4Q9HCK5 861 aaKnown RBP12.63□□□□□ -0.39
TUBBP1-201ENST00000248151 TNRC18O15417 2968 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms