RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 TGFB3P10600 412 aa24.29■■□□□ 1.48
HCFC1R1-201ENST00000248089 FUT2Q10981 343 aa24.29■■□□□ 1.48
HCFC1R1-201ENST00000248089 MYSM1Q5VVJ2 828 aa24.29■■□□□ 1.48
HCFC1R1-201ENST00000248089 PCNX4Q63HM2 1172 aa24.29■■□□□ 1.48
HCFC1R1-201ENST00000248089 GPR153Q6NV75 609 aa24.29■■□□□ 1.48
HCFC1R1-201ENST00000248089 DEFB123Q8N688 67 aa24.29■■□□□ 1.48
HCFC1R1-201ENST00000248089 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.29■■□□□ 1.482e-8■■■□□ 17
HCFC1R1-201ENST00000248089 MLXIPQ9HAP2 919 aa24.29■■□□□ 1.48
HCFC1R1-201ENST00000248089 FAM217BQ9NTX9 383 aaPredicted RBP24.29■■□□□ 1.48
HCFC1R1-201ENST00000248089 NOD1Q9Y239 953 aa24.29■■□□□ 1.48
HCFC1R1-201ENST00000248089 SPDYE3A6NKU9 549 aa24.28■■□□□ 1.48
HCFC1R1-201ENST00000248089 KAT2BQ92831 832 aa24.28■■□□□ 1.48
HCFC1R1-201ENST00000248089 INPP4AQ96PE3 977 aaPredicted RBP24.28■■□□□ 1.48
HCFC1R1-201ENST00000248089 WNT8AQ9H1J5 351 aa24.28■■□□□ 1.48
HCFC1R1-201ENST00000248089 TRIP12Q14669 1992 aaPredicted RBP24.27■■□□□ 1.48
HCFC1R1-201ENST00000248089 CCDC196A0A1B0GTZ2 297 aa24.27■■□□□ 1.48
HCFC1R1-201ENST00000248089 FIBPO43427 364 aa24.27■■□□□ 1.48
HCFC1R1-201ENST00000248089 EPB41L2O43491 1005 aaKnown RBP24.27■■□□□ 1.48
HCFC1R1-201ENST00000248089 ADD1P35611 737 aaKnown RBP24.27■■□□□ 1.48
HCFC1R1-201ENST00000248089 PTPN11Q06124 597 aaPredicted RBP24.27■■□□□ 1.48
HCFC1R1-201ENST00000248089 HSDL1Q3SXM5 330 aa24.27■■□□□ 1.48
HCFC1R1-201ENST00000248089 PPP1R18Q6NYC8 613 aa24.27■■□□□ 1.48
HCFC1R1-201ENST00000248089 ALG1Q9BT22 464 aa24.27■■□□□ 1.48
HCFC1R1-201ENST00000248089 KATNAL1Q9BW62 490 aa24.27■■□□□ 1.48
HCFC1R1-201ENST00000248089 USP26Q9BXU7 913 aa24.27■■□□□ 1.48
HCFC1R1-201ENST00000248089 PSEN2P49810 448 aa24.26■■□□□ 1.47
HCFC1R1-201ENST00000248089 SEMA3FQ13275 785 aa24.26■■□□□ 1.47
HCFC1R1-201ENST00000248089 MFSD10Q14728 455 aa24.26■■□□□ 1.47
HCFC1R1-201ENST00000248089 TYW1BQ6NUM6 668 aa24.26■■□□□ 1.47
HCFC1R1-201ENST00000248089 XRRA1Q6P2D8 792 aa24.26■■□□□ 1.47
HCFC1R1-201ENST00000248089 PSRC1Q6PGN9 363 aaPredicted RBP24.26■■□□□ 1.47
HCFC1R1-201ENST00000248089 C16orf59Q7L2K0 433 aa24.26■■□□□ 1.47
HCFC1R1-201ENST00000248089 SCLYQ96I15 445 aa24.26■■□□□ 1.47
HCFC1R1-201ENST00000248089 IL23AQ9NPF7 189 aa24.26■■□□□ 1.47
HCFC1R1-201ENST00000248089 PCDHA6Q9UN73 950 aa24.26■■□□□ 1.47
HCFC1R1-201ENST00000248089 PCDHA8Q9Y5H6 950 aa24.26■■□□□ 1.47
HCFC1R1-201ENST00000248089 SPATA31C2B4DYI2 1134 aa24.25■■□□□ 1.47
HCFC1R1-201ENST00000248089 STXBP3O00186 592 aa24.25■■□□□ 1.47
HCFC1R1-201ENST00000248089 NOP56O00567 594 aaKnown RBP24.25■■□□□ 1.47
HCFC1R1-201ENST00000248089 F2P00734 622 aa24.25■■□□□ 1.47
HCFC1R1-201ENST00000248089 ICAM3P32942 547 aa24.25■■□□□ 1.47
HCFC1R1-201ENST00000248089 ADCY7P51828 1080 aa24.25■■□□□ 1.47
HCFC1R1-201ENST00000248089 PTGISQ16647 500 aa24.25■■□□□ 1.47
HCFC1R1-201ENST00000248089 KIAA0753Q2KHM9 967 aa24.25■■□□□ 1.47
HCFC1R1-201ENST00000248089 TMEM240Q5SV17 173 aa24.25■■□□□ 1.47
HCFC1R1-201ENST00000248089 RUFY3Q7L099 469 aa24.25■■□□□ 1.47
HCFC1R1-201ENST00000248089 CYFIP1Q7L576 1253 aa24.25■■□□□ 1.47
HCFC1R1-201ENST00000248089 NLRX1Q86UT6 975 aa24.25■■□□□ 1.47
HCFC1R1-201ENST00000248089 C7orf31Q8N865 590 aa24.25■■□□□ 1.47
HCFC1R1-201ENST00000248089 BCAS3Q9H6U6 928 aa24.25■■□□□ 1.47
HCFC1R1-201ENST00000248089 EHMT1Q9H9B1 1298 aa24.25■■□□□ 1.47
HCFC1R1-201ENST00000248089 NID2Q14112 1375 aa24.25■■□□□ 1.47
HCFC1R1-201ENST00000248089 hCG_1984214I3L0E3 225 aa24.24■■□□□ 1.47
HCFC1R1-201ENST00000248089 SP4Q02446 784 aa24.24■■□□□ 1.47
HCFC1R1-201ENST00000248089 NEDD9Q14511 834 aa24.24■■□□□ 1.47
HCFC1R1-201ENST00000248089 GDF6Q6KF10 455 aaPredicted RBP24.24■■□□□ 1.47
HCFC1R1-201ENST00000248089 ZNF365Q70YC5 407 aa24.24■■□□□ 1.47
HCFC1R1-201ENST00000248089 ZNF713Q8N859 430 aaPredicted RBP24.24■■□□□ 1.47
HCFC1R1-201ENST00000248089 PGBD1Q96JS3 809 aa24.24■■□□□ 1.47
HCFC1R1-201ENST00000248089 AGXT2Q9BYV1 514 aa24.24■■□□□ 1.47
HCFC1R1-201ENST00000248089 RIC8AQ9NPQ8 531 aa24.24■■□□□ 1.47
HCFC1R1-201ENST00000248089 BARHL2Q9NY43 387 aa24.24■■□□□ 1.47
HCFC1R1-201ENST00000248089 CYP46A1Q9Y6A2 500 aa24.24■■□□□ 1.47
HCFC1R1-201ENST00000248089 PPFIA4O75335 1185 aa24.23■■□□□ 1.47
HCFC1R1-201ENST00000248089 HOXD8P13378 290 aaPredicted RBP24.23■■□□□ 1.47
HCFC1R1-201ENST00000248089 SMAD3P84022 425 aaKnown RBP24.23■■□□□ 1.47
HCFC1R1-201ENST00000248089 METTL7BQ6UX53 244 aa24.23■■□□□ 1.47
HCFC1R1-201ENST00000248089 FBXL16Q8N461 479 aa24.23■■□□□ 1.47
HCFC1R1-201ENST00000248089 FAM161BQ96MY7 647 aa24.23■■□□□ 1.47
HCFC1R1-201ENST00000248089 UPF3BQ9BZI7 483 aaKnown RBP24.23■■□□□ 1.47
HCFC1R1-201ENST00000248089 ZSWIM6Q9HCJ5 1215 aa24.23■■□□□ 1.47
HCFC1R1-201ENST00000248089 HDAC6Q9UBN7 1215 aa24.23■■□□□ 1.47
HCFC1R1-201ENST00000248089 GBF1Q92538 1859 aa24.23■■□□□ 1.47
HCFC1R1-201ENST00000248089 SMCO2A6NFE2 343 aa24.22■■□□□ 1.47
HCFC1R1-201ENST00000248089 PPFIA3O75145 1194 aa24.22■■□□□ 1.47
HCFC1R1-201ENST00000248089 PFKFB3Q16875 520 aaPredicted RBP24.22■■□□□ 1.47
HCFC1R1-201ENST00000248089 ZNF697Q5TEC3 545 aa24.22■■□□□ 1.47
HCFC1R1-201ENST00000248089 SESTD1Q86VW0 696 aa24.22■■□□□ 1.47
HCFC1R1-201ENST00000248089 PKD2L1Q9P0L9 805 aa24.22■■□□□ 1.47
HCFC1R1-201ENST00000248089 GTF2IRD1Q9UHL9 959 aa24.22■■□□□ 1.47
HCFC1R1-201ENST00000248089 SCG2P13521 617 aa24.21■■□□□ 1.47
HCFC1R1-201ENST00000248089 CCT2P78371 535 aaKnown RBP24.21■■□□□ 1.47
HCFC1R1-201ENST00000248089 BFSP2Q13515 415 aa24.21■■□□□ 1.47
HCFC1R1-201ENST00000248089 TOB2Q14106 344 aaPredicted RBP24.21■■□□□ 1.47
HCFC1R1-201ENST00000248089 RETREG2Q8NC44 543 aa24.21■■□□□ 1.47
HCFC1R1-201ENST00000248089 PHKBQ93100 1093 aa24.21■■□□□ 1.47
HCFC1R1-201ENST00000248089 GPRASP2Q96D09 838 aa24.21■■□□□ 1.47
HCFC1R1-201ENST00000248089 NCOA5Q9HCD5 579 aaKnown RBP24.21■■□□□ 1.47
HCFC1R1-201ENST00000248089 TMEM260Q9NX78 707 aa24.21■■□□□ 1.47
HCFC1R1-201ENST00000248089 HAS3O00219 553 aa24.2■■□□□ 1.46
HCFC1R1-201ENST00000248089 FGBP02675 491 aa24.2■■□□□ 1.46
HCFC1R1-201ENST00000248089 LGALS2P05162 132 aa24.2■■□□□ 1.46
HCFC1R1-201ENST00000248089 ITGB5P18084 799 aa24.2■■□□□ 1.46
HCFC1R1-201ENST00000248089 AKAP17AQ02040 695 aaKnown RBP24.2■■□□□ 1.46
HCFC1R1-201ENST00000248089 MTMR1Q13613 665 aa24.2■■□□□ 1.46
HCFC1R1-201ENST00000248089 OTOP2Q7RTS6 562 aa24.2■■□□□ 1.46
HCFC1R1-201ENST00000248089 DEFB128Q7Z7B8 93 aa24.2■■□□□ 1.46
HCFC1R1-201ENST00000248089 RPUSD2Q8IZ73 545 aaKnown RBP24.2■■□□□ 1.46
HCFC1R1-201ENST00000248089 CCDC155Q8N6L0 562 aa24.2■■□□□ 1.46
HCFC1R1-201ENST00000248089 CDHR1Q96JP9 859 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms