RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 ERVK-9P63128 1117 aa14.55□□□□□ -0.08
HIF3A-201ENST00000244302 ERVK-24P63145 666 aa14.55□□□□□ -0.08
HIF3A-201ENST00000244302 GRB10Q13322 594 aa14.55□□□□□ -0.08
HIF3A-201ENST00000244302 PDXDC2PQ6P474 469 aa14.55□□□□□ -0.08
HIF3A-201ENST00000244302 MXRA8Q9BRK3 442 aa14.55□□□□□ -0.08
HIF3A-201ENST00000244302 KCNH7Q9NS40 1196 aa14.55□□□□□ -0.08
HIF3A-201ENST00000244302 KIAA1468Q9P260 1216 aa14.55□□□□□ -0.08
HIF3A-201ENST00000244302 SOWAHBA6NEL2 793 aa14.54□□□□□ -0.08
HIF3A-201ENST00000244302 FAM155AB1AL88 458 aaPredicted RBP14.54□□□□□ -0.08
HIF3A-201ENST00000244302 NR3C2P08235 984 aa14.54□□□□□ -0.08
HIF3A-201ENST00000244302 ZBTB48P10074 688 aaPredicted RBP14.54□□□□□ -0.08
HIF3A-201ENST00000244302 BMP6P22004 513 aa14.54□□□□□ -0.08
HIF3A-201ENST00000244302 PTGS1P23219 599 aa14.54□□□□□ -0.08
HIF3A-201ENST00000244302 HTRA3P83110 453 aa14.54□□□□□ -0.08
HIF3A-201ENST00000244302 CYP4F22Q6NT55 531 aa14.54□□□□□ -0.08
HIF3A-201ENST00000244302 C11orf57Q6ZUT1 292 aaPredicted RBP14.54□□□□□ -0.08
HIF3A-201ENST00000244302 DNAJC25Q9H1X3 360 aa14.54□□□□□ -0.08
HIF3A-201ENST00000244302 DISC1Q9NRI5 854 aa14.54□□□□□ -0.08
HIF3A-201ENST00000244302 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.54□□□□□ -0.08
HIF3A-201ENST00000244302 VAV3Q9UKW4 847 aa14.54□□□□□ -0.08
HIF3A-201ENST00000244302 HTTP42858 3142 aa14.54□□□□□ -0.08
HIF3A-201ENST00000244302 TESPA1A2RU30 521 aaPredicted RBP14.54□□□□□ -0.08
HIF3A-201ENST00000244302 SEMA3FQ13275 785 aa14.54□□□□□ -0.08
HIF3A-201ENST00000244302 ITGB3BPQ13352 177 aaPredicted RBP14.54□□□□□ -0.08
HIF3A-201ENST00000244302 TKFCQ3LXA3 575 aa14.54□□□□□ -0.08
HIF3A-201ENST00000244302 NCAPH2Q6IBW4 605 aa14.54□□□□□ -0.08
HIF3A-201ENST00000244302 MOXD1Q6UVY6 613 aa14.54□□□□□ -0.08
HIF3A-201ENST00000244302 EEPD1Q7L9B9 569 aa14.54□□□□□ -0.08
HIF3A-201ENST00000244302 MB21D1Q8N884 522 aa14.54□□□□□ -0.08
HIF3A-201ENST00000244302 RASSF8Q8NHQ8 419 aa14.54□□□□□ -0.08
HIF3A-201ENST00000244302 RGL1Q9NZL6 768 aa14.54□□□□□ -0.08
HIF3A-201ENST00000244302 CPA4Q9UI42 421 aa14.54□□□□□ -0.08
HIF3A-201ENST00000244302 RABGAP1Q9Y3P9 1069 aa14.54□□□□□ -0.08
HIF3A-201ENST00000244302 ZBTB39O15060 712 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 MED24O75448 989 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 SLFN14P0C7P3 912 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 PSMC6P62333 389 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 CYP4A11Q02928 519 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 CUL4BQ13620 913 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 ANO6Q4KMQ2 910 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 RRAGBQ5VZM2 374 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 PCNX4Q63HM2 1172 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 SH3RF1Q7Z6J0 888 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 ANKRD23Q86SG2 305 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 VSIG10LQ86VR7 867 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 CHST13Q8NET6 341 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 SNX29Q8TEQ0 813 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 FGD4Q96M96 766 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 TIGD1Q96MW7 591 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 CCSER1Q9C0I3 900 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 UBIAD1Q9Y5Z9 338 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 TLL2Q9Y6L7 1015 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 TRPM7Q96QT4 1865 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 POTEB3A0JP26 581 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 STAT6P42226 847 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 PABPC4Q13310 644 aaKnown RBP eCLIP14.53□□□□□ -0.08
HIF3A-201ENST00000244302 ORC2Q13416 577 aaPredicted RBP14.53□□□□□ -0.08
HIF3A-201ENST00000244302 POSTNQ15063 836 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 DPCR1Q3MIW9 517 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 TMEM63BQ5T3F8 832 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 MCTP2Q6DN12 878 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 POTEBQ6S5H4 581 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 PAXIP1Q6ZW49 1069 aaPredicted RBP14.53□□□□□ -0.08
HIF3A-201ENST00000244302 OTOP1Q7RTM1 612 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 ZNF784Q8NCA9 323 aaPredicted RBP14.53□□□□□ -0.08
HIF3A-201ENST00000244302 SMC1BQ8NDV3 1235 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 ZNF577Q9BSK1 485 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 POLD4Q9HCU8 107 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 BLOC1S4Q9NUP1 217 aa14.53□□□□□ -0.08
HIF3A-201ENST00000244302 LCTP09848 1927 aa14.52□□□□□ -0.08
HIF3A-201ENST00000244302 FRMPD4Q14CM0 1322 aa14.52□□□□□ -0.08
HIF3A-201ENST00000244302 DHX15O43143 795 aaKnown RBP14.52□□□□□ -0.09
HIF3A-201ENST00000244302 PSMD10O75832 226 aa14.52□□□□□ -0.09
HIF3A-201ENST00000244302 PDIA5Q14554 519 aa14.52□□□□□ -0.09
HIF3A-201ENST00000244302 IQUBQ8NA54 791 aa14.52□□□□□ -0.09
HIF3A-201ENST00000244302 A0A0G2JMZ2 1700 aa14.52□□□□□ -0.09
HIF3A-201ENST00000244302 E9PMD0 336 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 IPO5O00410 1097 aaKnown RBP14.51□□□□□ -0.09
HIF3A-201ENST00000244302 SLC10A3P09131 477 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 SPATA31C1P0DKV0 1188 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 SP2Q02086 613 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 MCM6Q14566 821 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 TMEM266Q2M3C6 531 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 LRCH2Q5VUJ6 765 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 SASS6Q6UVJ0 657 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 TRMT1LQ7Z2T5 733 aaKnown RBP14.51□□□□□ -0.09
HIF3A-201ENST00000244302 CATSPER3Q86XQ3 398 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 GPRC5AQ8NFJ5 357 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 NSUN6Q8TEA1 469 aaKnown RBP14.51□□□□□ -0.09
HIF3A-201ENST00000244302 SLC5A5Q92911 643 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 MAP7D2Q96T17 732 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 UNC45AQ9H3U1 944 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 AGO4Q9HCK5 861 aaKnown RBP14.51□□□□□ -0.09
HIF3A-201ENST00000244302 JADE2Q9NQC1 790 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 WRAP73Q9P2S5 460 aaPredicted RBP14.51□□□□□ -0.09
HIF3A-201ENST00000244302 KIAA1024Q9UPX6 916 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 DNAH12Q6ZR08 3092 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 POTEFA5A3E0 1075 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 TMEM88BA6NKF7 163 aa14.51□□□□□ -0.09
HIF3A-201ENST00000244302 POTEB2H3BUK9 544 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms