RNA–Protein interactions for RNA: ENST00000239444.3

PCDHB8-201, Transcript of protocadherin beta 8, humanhuman

APPRIS P1 BASIC

Gene PCDHB8, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8-201ENST00000239444 IFT81Q8WYA0 676 aa17.01■□□□□ 0.31
PCDHB8-201ENST00000239444 ANKS1AQ92625 1134 aa17.01■□□□□ 0.31
PCDHB8-201ENST00000239444 DDX12PQ92771 950 aa17.01■□□□□ 0.31
PCDHB8-201ENST00000239444 STIM2Q9P246 746 aa17.01■□□□□ 0.31
PCDHB8-201ENST00000239444 USP21Q9UK80 565 aa17.01■□□□□ 0.31
PCDHB8-201ENST00000239444 GRIN2DO15399 1336 aa17.01■□□□□ 0.31
PCDHB8-201ENST00000239444 SSBP05455 408 aaKnown RBP eCLIP17.01■□□□□ 0.31
PCDHB8-201ENST00000239444 LIG3P49916 1009 aa17.01■□□□□ 0.31
PCDHB8-201ENST00000239444 AMPD3Q01432 767 aa17.01■□□□□ 0.31
PCDHB8-201ENST00000239444 CALCRLQ16602 461 aa17.01■□□□□ 0.31
PCDHB8-201ENST00000239444 LRRC55Q6ZSA7 311 aa17.01■□□□□ 0.31
PCDHB8-201ENST00000239444 AMOTL1Q8IY63 956 aa17.01■□□□□ 0.31
PCDHB8-201ENST00000239444 REXO1Q8N1G1 1221 aaKnown RBP17.01■□□□□ 0.31
PCDHB8-201ENST00000239444 CDK5RAP3Q96JB5 506 aa17.01■□□□□ 0.31
PCDHB8-201ENST00000239444 CAPS2Q9BXY5 557 aa17.01■□□□□ 0.31
PCDHB8-201ENST00000239444 GOLPH3Q9H4A6 298 aa17.01■□□□□ 0.31
PCDHB8-201ENST00000239444 NFU1Q9UMS0 254 aa17.01■□□□□ 0.31
PCDHB8-201ENST00000239444 UBAP1LF5GYI3 381 aa17■□□□□ 0.31
PCDHB8-201ENST00000239444 TLR2O60603 784 aa17■□□□□ 0.31
PCDHB8-201ENST00000239444 SHOX2O60902 331 aaPredicted RBP17■□□□□ 0.31
PCDHB8-201ENST00000239444 HNRNPH3P31942 346 aaKnown RBP17■□□□□ 0.31
PCDHB8-201ENST00000239444 CDK8P49336 464 aa17■□□□□ 0.31
PCDHB8-201ENST00000239444 GUCY2FP51841 1108 aa17■□□□□ 0.31
PCDHB8-201ENST00000239444 NELFCDQ8IXH7 590 aa17■□□□□ 0.31
PCDHB8-201ENST00000239444 SNX29Q8TEQ0 813 aa17■□□□□ 0.31
PCDHB8-201ENST00000239444 ZIM3Q96PE6 472 aa17■□□□□ 0.31
PCDHB8-201ENST00000239444 ALS2CR12Q96Q35 445 aa17■□□□□ 0.31
PCDHB8-201ENST00000239444 SEC63Q9UGP8 760 aaKnown RBP17■□□□□ 0.31
PCDHB8-201ENST00000239444 RFC4P35249 363 aa17■□□□□ 0.31
PCDHB8-201ENST00000239444 UBE2SQ16763 222 aa17■□□□□ 0.31
PCDHB8-201ENST00000239444 HGSNATQ68CP4 663 aa17■□□□□ 0.31
PCDHB8-201ENST00000239444 SPTY2D1Q68D10 685 aaPredicted RBP17■□□□□ 0.31
PCDHB8-201ENST00000239444 GALNT17Q6IS24 598 aa17■□□□□ 0.31
PCDHB8-201ENST00000239444 MICALL1Q8N3F8 863 aa17■□□□□ 0.31
PCDHB8-201ENST00000239444 PACSIN1Q9BY11 444 aa17■□□□□ 0.31
PCDHB8-201ENST00000239444 PDXDC1Q6P996 788 aa16.99■□□□□ 0.31
PCDHB8-201ENST00000239444 UNC13DQ70J99 1090 aa16.99■□□□□ 0.31
PCDHB8-201ENST00000239444 LRRC47Q8N1G4 583 aaKnown RBP16.99■□□□□ 0.31
PCDHB8-201ENST00000239444 MAGEF1Q9HAY2 307 aa16.99■□□□□ 0.31
PCDHB8-201ENST00000239444 SNED1Q8TER0 1413 aa16.99■□□□□ 0.31
PCDHB8-201ENST00000239444 PALMO75781 387 aa16.99■□□□□ 0.31
PCDHB8-201ENST00000239444 GRAPQ13588 217 aa16.99■□□□□ 0.31
PCDHB8-201ENST00000239444 ASTE1Q2TB18 679 aaPredicted RBP16.99■□□□□ 0.31
PCDHB8-201ENST00000239444 TRAPPC3LQ5T215 181 aa16.99■□□□□ 0.31
PCDHB8-201ENST00000239444 GRAPLQ8TC17 118 aaPredicted RBP16.99■□□□□ 0.31
PCDHB8-201ENST00000239444 SPZ1Q9BXG8 430 aa16.99■□□□□ 0.31
PCDHB8-201ENST00000239444 EPB41L5Q9HCM4 733 aa16.99■□□□□ 0.31
PCDHB8-201ENST00000239444 NPHP3-ACAD11A0A0J9YXS1 232 aa16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 TCP1P17987 556 aaKnown RBP16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 KLRC1P26715 233 aa16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 GNA11P29992 359 aa16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 PAFAH1B1P43034 410 aa16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 BTDP43251 543 aa16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 TNNI2P48788 182 aa16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 POLR2FP61218 127 aaKnown RBP16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 GUCY2DQ02846 1103 aa16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 CCDC43Q96MW1 224 aaKnown RBP16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 MTMR9Q96QG7 549 aa16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 TRAF5O00463 557 aa16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 PPFIA1Q13136 1202 aa16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 LEMD3Q9Y2U8 911 aa16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 ZEB2O60315 1214 aa16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 NOL4O94818 638 aa16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 HEXIM1O94992 359 aaKnown RBP16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 LCA5LO95447 670 aa16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 EPHB4P54760 987 aa16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 WDR66Q8TBY9 1149 aa16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 RUFY1Q96T51 708 aa16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 LSM14BQ9BX40 385 aaKnown RBP16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 EFCC1Q9HA90 598 aa16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 GPCPD1Q9NPB8 672 aa16.98■□□□□ 0.31
PCDHB8-201ENST00000239444 SLURP2P0DP57 97 aa16.97■□□□□ 0.31
PCDHB8-201ENST00000239444 CCDC40Q4G0X9 1142 aa16.97■□□□□ 0.31
PCDHB8-201ENST00000239444 TBC1D5Q92609 795 aa16.97■□□□□ 0.31
PCDHB8-201ENST00000239444 RAD54LQ92698 747 aa16.97■□□□□ 0.31
PCDHB8-201ENST00000239444 NOX5Q96PH1 765 aa16.97■□□□□ 0.31
PCDHB8-201ENST00000239444 KRT12Q99456 494 aa16.97■□□□□ 0.31
PCDHB8-201ENST00000239444 SH3GL2Q99962 352 aa16.97■□□□□ 0.31
PCDHB8-201ENST00000239444 FAM169AQ9Y6X4 670 aa16.97■□□□□ 0.31
PCDHB8-201ENST00000239444 EIF3HO15372 352 aaKnown RBP eCLIP16.97■□□□□ 0.31
PCDHB8-201ENST00000239444 EHHADHQ08426 723 aa16.97■□□□□ 0.31
PCDHB8-201ENST00000239444 FAM196AQ6ZSG2 479 aa16.97■□□□□ 0.31
PCDHB8-201ENST00000239444 GUF1Q8N442 669 aaKnown RBP16.97■□□□□ 0.31
PCDHB8-201ENST00000239444 KAT2BQ92831 832 aa16.97■□□□□ 0.31
PCDHB8-201ENST00000239444 HSF2BPO75031 334 aa16.96■□□□□ 0.31
PCDHB8-201ENST00000239444 RAPGEF1Q13905 1077 aa16.96■□□□□ 0.31
PCDHB8-201ENST00000239444 FAM83BQ5T0W9 1011 aa16.96■□□□□ 0.31
PCDHB8-201ENST00000239444 ZNF572Q7Z3I7 529 aaPredicted RBP16.96■□□□□ 0.31
PCDHB8-201ENST00000239444 TADA2BQ86TJ2 420 aa16.96■□□□□ 0.31
PCDHB8-201ENST00000239444 CCDC84Q86UT8 332 aaPredicted RBP16.96■□□□□ 0.31
PCDHB8-201ENST00000239444 CNBD1Q8NA66 436 aa16.96■□□□□ 0.31
PCDHB8-201ENST00000239444 RTFDC1Q9BY42 306 aaPredicted RBP16.96■□□□□ 0.31
PCDHB8-201ENST00000239444 ADAMTS1Q9UHI8 967 aa16.96■□□□□ 0.31
PCDHB8-201ENST00000239444 ROBO3Q96MS0 1386 aa16.96■□□□□ 0.31
PCDHB8-201ENST00000239444 A0A087X0T9 212 aa16.96■□□□□ 0.3
PCDHB8-201ENST00000239444 BAG3O95817 575 aa16.96■□□□□ 0.3
PCDHB8-201ENST00000239444 FAM228BP0C875 321 aa16.96■□□□□ 0.3
PCDHB8-201ENST00000239444 KLHL7Q8IXQ5 586 aa16.96■□□□□ 0.3
PCDHB8-201ENST00000239444 TEX11Q8IYF3 940 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms