RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 ZKSCAN8Q15776 578 aaPredicted RBP12.04□□□□□ -0.48
CCDC170-201ENST00000239374 PIGBQ92521 554 aa12.04□□□□□ -0.48
CCDC170-201ENST00000239374 TSPOAP1O95153 1857 aa12.04□□□□□ -0.48
CCDC170-201ENST00000239374 KRT5P13647 590 aa12.04□□□□□ -0.48
CCDC170-201ENST00000239374 IL6STP40189 918 aaPredicted RBP12.04□□□□□ -0.48
CCDC170-201ENST00000239374 MAGOHP61326 146 aaKnown RBP12.04□□□□□ -0.48
CCDC170-201ENST00000239374 USP37Q86T82 979 aa12.04□□□□□ -0.48
CCDC170-201ENST00000239374 TBC1D1Q86TI0 1168 aaPredicted RBP12.04□□□□□ -0.48
CCDC170-201ENST00000239374 RNF10Q8N5U6 811 aaKnown RBP12.04□□□□□ -0.48
CCDC170-201ENST00000239374 PPFIBP2Q8ND30 876 aa12.04□□□□□ -0.48
CCDC170-201ENST00000239374 DDX47Q9H0S4 455 aaKnown RBP12.04□□□□□ -0.48
CCDC170-201ENST00000239374 RIMBP2O15034 1052 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 UFL1O94874 794 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 BCRP11274 1271 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 ZNF131P52739 623 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 CLUL1Q15846 466 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 NTRK3Q16288 839 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 FAM83BQ5T0W9 1011 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 SUSD4Q5VX71 490 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 ARHGEF2Q92974 986 aaKnown RBP12.03□□□□□ -0.48
CCDC170-201ENST00000239374 COA7Q96BR5 231 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 BRIP1Q9BX63 1249 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 LACRTQ9GZZ8 138 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 RBM12Q9NTZ6 932 aaKnown RBP12.03□□□□□ -0.48
CCDC170-201ENST00000239374 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.03□□□□□ -0.48
CCDC170-201ENST00000239374 KRT15P19012 456 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 SEC24CP53992 1094 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 CYP4A11Q02928 519 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 PRR16Q569H4 304 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 PPP1R14CQ8TAE6 165 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 CCT8L2Q96SF2 557 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 EHD2Q9NZN4 543 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 PTPN22Q9Y2R2 807 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 CEP83Q9Y592 693 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 BMP6P22004 513 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 PABPC4Q13310 644 aaKnown RBP eCLIP12.03□□□□□ -0.48
CCDC170-201ENST00000239374 KCNB1Q14721 858 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 UNC13DQ70J99 1090 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 KLHL29Q96CT2 875 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 KLC4Q9NSK0 619 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 ZNF219Q9P2Y4 722 aaPredicted RBP12.03□□□□□ -0.48
CCDC170-201ENST00000239374 COL15A1P39059 1388 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 SUN1O94901 812 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 USH1GQ495M9 461 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 CDKAL1Q5VV42 579 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 STMN2Q93045 179 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 ZIM3Q96PE6 472 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 CNOT10Q9H9A5 744 aaKnown RBP12.03□□□□□ -0.48
CCDC170-201ENST00000239374 METTL14Q9HCE5 456 aaKnown RBP12.03□□□□□ -0.48
CCDC170-201ENST00000239374 PRM3Q9NNZ6 103 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 EMILIN3Q9NT22 766 aa12.03□□□□□ -0.48
CCDC170-201ENST00000239374 GFPT2O94808 682 aa12.02□□□□□ -0.48
CCDC170-201ENST00000239374 HNRNPH1P31943 449 aaKnown RBP12.02□□□□□ -0.48
CCDC170-201ENST00000239374 CARSP49589 748 aaKnown RBP12.02□□□□□ -0.48
CCDC170-201ENST00000239374 MECOMQ03112 1051 aa12.02□□□□□ -0.48
CCDC170-201ENST00000239374 ADCY1Q08828 1119 aa12.02□□□□□ -0.48
CCDC170-201ENST00000239374 STK4Q13043 487 aa12.02□□□□□ -0.48
CCDC170-201ENST00000239374 ELAC2Q9BQ52 826 aaKnown RBP12.02□□□□□ -0.48
CCDC170-201ENST00000239374 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.02□□□□□ -0.48
CCDC170-201ENST00000239374 WDR17Q8IZU2 1322 aa12.02□□□□□ -0.48
CCDC170-201ENST00000239374 ADAMTS13Q76LX8 1427 aa12.02□□□□□ -0.48
CCDC170-201ENST00000239374 POTEMA6NI47 508 aa12.02□□□□□ -0.48
CCDC170-201ENST00000239374 AFPP02771 609 aaKnown RBP12.02□□□□□ -0.48
CCDC170-201ENST00000239374 LSP1P33241 339 aa12.02□□□□□ -0.48
CCDC170-201ENST00000239374 TRIM28Q13263 835 aaKnown RBP12.02□□□□□ -0.48
CCDC170-201ENST00000239374 PPP2R5AQ15172 486 aa12.02□□□□□ -0.48
CCDC170-201ENST00000239374 UAP1Q16222 522 aaPredicted RBP12.02□□□□□ -0.48
CCDC170-201ENST00000239374 TSNAXIP1Q2TAA8 658 aa12.02□□□□□ -0.48
CCDC170-201ENST00000239374 NEK9Q8TD19 979 aa12.02□□□□□ -0.48
CCDC170-201ENST00000239374 ZNF473Q8WTR7 871 aaKnown RBP12.02□□□□□ -0.48
CCDC170-201ENST00000239374 EPN3Q9H201 632 aa12.02□□□□□ -0.48
CCDC170-201ENST00000239374 TAF1DQ9H5J8 278 aaPredicted RBP12.02□□□□□ -0.48
CCDC170-201ENST00000239374 SH2D4AQ9H788 454 aa12.02□□□□□ -0.48
CCDC170-201ENST00000239374 KANSL2Q9H9L4 492 aa12.02□□□□□ -0.48
CCDC170-201ENST00000239374 CPSF2Q9P2I0 782 aaKnown RBP12.02□□□□□ -0.48
CCDC170-201ENST00000239374 DMGDHQ9UI17 866 aaKnown RBP12.02□□□□□ -0.48
CCDC170-201ENST00000239374 MYO1FO00160 1098 aa12.02□□□□□ -0.49
CCDC170-201ENST00000239374 GAS8O95995 478 aa12.02□□□□□ -0.49
CCDC170-201ENST00000239374 FGGP02679 453 aa12.02□□□□□ -0.49
CCDC170-201ENST00000239374 TPH2Q8IWU9 490 aa12.02□□□□□ -0.49
CCDC170-201ENST00000239374 TRIM9Q9C026 710 aa12.02□□□□□ -0.49
CCDC170-201ENST00000239374 GLT8D2Q9H1C3 349 aa12.02□□□□□ -0.49
CCDC170-201ENST00000239374 CEP72Q9P209 647 aa12.02□□□□□ -0.49
CCDC170-201ENST00000239374 HDAC9Q9UKV0 1011 aa12.02□□□□□ -0.49
CCDC170-201ENST00000239374 CDHR2Q9BYE9 1310 aa12.02□□□□□ -0.49
CCDC170-201ENST00000239374 TMEM131LA2VDJ0 1609 aa12.02□□□□□ -0.49
CCDC170-201ENST00000239374 XDHP47989 1333 aa12.02□□□□□ -0.49
CCDC170-201ENST00000239374 MDH1P40925 334 aaKnown RBP12.02□□□□□ -0.49
CCDC170-201ENST00000239374 BIRC3Q13489 604 aa12.02□□□□□ -0.49
CCDC170-201ENST00000239374 HHATQ5VTY9 493 aa12.02□□□□□ -0.49
CCDC170-201ENST00000239374 LRCH2Q5VUJ6 765 aa12.02□□□□□ -0.49
CCDC170-201ENST00000239374 DGKHQ86XP1 1220 aa12.02□□□□□ -0.49
CCDC170-201ENST00000239374 TECPR2O15040 1411 aa12.02□□□□□ -0.49
CCDC170-201ENST00000239374 MESDQ14696 234 aa12.02□□□□□ -0.49
CCDC170-201ENST00000239374 PACS2Q86VP3 889 aa12.02□□□□□ -0.49
CCDC170-201ENST00000239374 FBXL16Q8N461 479 aa12.02□□□□□ -0.49
CCDC170-201ENST00000239374 ITSN1Q15811 1721 aa12.01□□□□□ -0.49
CCDC170-201ENST00000239374 CLIC2O15247 247 aa12.01□□□□□ -0.49
CCDC170-201ENST00000239374 PLEKP08567 350 aaPredicted RBP12.01□□□□□ -0.49
CCDC170-201ENST00000239374 SARSP49591 514 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms