RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 FOXR1Q6PIV2 292 aa17.23■□□□□ 0.35
CTSD-201ENST00000236671 ZNF804AQ7Z570 1209 aa17.23■□□□□ 0.35
CTSD-201ENST00000236671 GUF1Q8N442 669 aaKnown RBP17.23■□□□□ 0.35
CTSD-201ENST00000236671 MMGT1Q8N4V1 131 aa17.23■□□□□ 0.35
CTSD-201ENST00000236671 LARP4BQ92615 738 aaKnown RBP17.23■□□□□ 0.35
CTSD-201ENST00000236671 CEP95Q96GE4 821 aa17.23■□□□□ 0.35
CTSD-201ENST00000236671 VAT1LQ9HCJ6 419 aa17.23■□□□□ 0.35
CTSD-201ENST00000236671 POLLQ9UGP5 575 aa17.23■□□□□ 0.35
CTSD-201ENST00000236671 NFKBIEO00221 500 aa17.23■□□□□ 0.35
CTSD-201ENST00000236671 USO1O60763 962 aaKnown RBP17.23■□□□□ 0.35
CTSD-201ENST00000236671 TACC1O75410 805 aa17.23■□□□□ 0.35
CTSD-201ENST00000236671 BBOX1O75936 387 aa17.23■□□□□ 0.35
CTSD-201ENST00000236671 EIF4A3P38919 411 aaKnown RBP17.23■□□□□ 0.35
CTSD-201ENST00000236671 NOVP48745 357 aa17.23■□□□□ 0.35
CTSD-201ENST00000236671 ITIH3Q06033 890 aa17.23■□□□□ 0.35
CTSD-201ENST00000236671 LRRC55Q6ZSA7 311 aa17.23■□□□□ 0.35
CTSD-201ENST00000236671 AFAP1L1Q8TED9 768 aa17.23■□□□□ 0.35
CTSD-201ENST00000236671 AENQ8WTP8 325 aaKnown RBP17.23■□□□□ 0.35
CTSD-201ENST00000236671 SBF1O95248 1867 aa17.23■□□□□ 0.35
CTSD-201ENST00000236671 COL4A5P29400 1685 aa17.22■□□□□ 0.35
CTSD-201ENST00000236671 MYO1CO00159 1063 aa17.22■□□□□ 0.35
CTSD-201ENST00000236671 SLC37A4O43826 429 aa17.22■□□□□ 0.35
CTSD-201ENST00000236671 EDIL3O43854 480 aa17.22■□□□□ 0.35
CTSD-201ENST00000236671 MOCS3O95396 460 aa17.22■□□□□ 0.35
CTSD-201ENST00000236671 PRLRP16471 622 aa17.22■□□□□ 0.35
CTSD-201ENST00000236671 LRRC31Q6UY01 552 aa17.22■□□□□ 0.35
CTSD-201ENST00000236671 ARHGAP27Q6ZUM4 889 aa17.22■□□□□ 0.35
CTSD-201ENST00000236671 CERS3Q8IU89 383 aa17.22■□□□□ 0.35
CTSD-201ENST00000236671 RIN2Q8WYP3 895 aaPredicted RBP17.22■□□□□ 0.35
CTSD-201ENST00000236671 BAP1Q92560 729 aa17.22■□□□□ 0.35
CTSD-201ENST00000236671 ZNF277Q9NRM2 450 aaPredicted RBP17.22■□□□□ 0.35
CTSD-201ENST00000236671 GPR75-ASB3A0A0A6YYF3 556 aa17.21■□□□□ 0.35
CTSD-201ENST00000236671 LRRC53A6NM62 1247 aa17.21■□□□□ 0.35
CTSD-201ENST00000236671 USP17L5A8MUK1 530 aa17.21■□□□□ 0.35
CTSD-201ENST00000236671 AGPSO00116 658 aa17.21■□□□□ 0.35
CTSD-201ENST00000236671 TDP2O95551 362 aa17.21■□□□□ 0.35
CTSD-201ENST00000236671 GGCXP38435 758 aa17.21■□□□□ 0.35
CTSD-201ENST00000236671 LRRC63Q05C16 580 aa17.21■□□□□ 0.35
CTSD-201ENST00000236671 DYMQ7RTS9 669 aa17.21■□□□□ 0.35
CTSD-201ENST00000236671 CCDC84Q86UT8 332 aaPredicted RBP17.21■□□□□ 0.35
CTSD-201ENST00000236671 UBA5Q9GZZ9 404 aa17.21■□□□□ 0.35
CTSD-201ENST00000236671 RIOX1Q9H6W3 641 aa17.21■□□□□ 0.35
CTSD-201ENST00000236671 RRP15Q9Y3B9 282 aaKnown RBP17.21■□□□□ 0.35
CTSD-201ENST00000236671 PCNTO95613 3336 aa17.21■□□□□ 0.35
CTSD-201ENST00000236671 EHHADHQ08426 723 aa17.21■□□□□ 0.35
CTSD-201ENST00000236671 C15orf52Q6ZUT6 534 aaKnown RBP17.21■□□□□ 0.35
CTSD-201ENST00000236671 SP8Q8IXZ3 490 aa17.21■□□□□ 0.35
CTSD-201ENST00000236671 TEX11Q8IYF3 940 aa17.21■□□□□ 0.35
CTSD-201ENST00000236671 GOLGA6L1Q8N7Z2 621 aa17.21■□□□□ 0.35
CTSD-201ENST00000236671 RAD54LQ92698 747 aa17.21■□□□□ 0.35
CTSD-201ENST00000236671 DRC1Q96MC2 740 aa17.21■□□□□ 0.35
CTSD-201ENST00000236671 CRACR2AQ9BSW2 395 aa17.21■□□□□ 0.35
CTSD-201ENST00000236671 MMRN2Q9H8L6 949 aa17.21■□□□□ 0.35
CTSD-201ENST00000236671 FAM184BQ9ULE4 1060 aa17.21■□□□□ 0.35
CTSD-201ENST00000236671 POTEMA6NI47 508 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 hCG_1984214I3L0E3 225 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 RIMBP2O15034 1052 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 PJA2O43164 708 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 TMEM266Q2M3C6 531 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 ZNF713Q8N859 430 aaPredicted RBP17.2■□□□□ 0.34
CTSD-201ENST00000236671 HDAC7Q8WUI4 952 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 RUBCNQ92622 972 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 CDK5RAP3Q96JB5 506 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 OSBPL9Q96SU4 736 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 AKR1B10O60218 316 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 FGFR1OPO95684 399 aaKnown RBP17.2■□□□□ 0.34
CTSD-201ENST00000236671 PDHBP11177 359 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 ASTE1Q2TB18 679 aaPredicted RBP17.2■□□□□ 0.34
CTSD-201ENST00000236671 TMEM119Q4V9L6 283 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 CCDC70Q6NSX1 233 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 NFRKBQ6P4R8 1299 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 RRAGAQ7L523 313 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 KCNK18Q7Z418 384 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 GLIS3Q8NEA6 775 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 SPATA4Q8NEY3 305 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 NUDT12Q9BQG2 462 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 DEF6Q9H4E7 631 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 HYOU1Q9Y4L1 999 aa17.2■□□□□ 0.34
CTSD-201ENST00000236671 C6orf229H3BNL8 230 aa17.19■□□□□ 0.34
CTSD-201ENST00000236671 TRIM66O15016 1216 aa17.19■□□□□ 0.34
CTSD-201ENST00000236671 UFL1O94874 794 aa17.19■□□□□ 0.34
CTSD-201ENST00000236671 RHBDL3P58872 404 aa17.19■□□□□ 0.34
CTSD-201ENST00000236671 PDXDC1Q6P996 788 aa17.19■□□□□ 0.34
CTSD-201ENST00000236671 FOXR2Q6PJQ5 311 aa17.19■□□□□ 0.34
CTSD-201ENST00000236671 DPP8Q6V1X1 898 aaPredicted RBP17.19■□□□□ 0.34
CTSD-201ENST00000236671 GPIHBP1Q8IV16 184 aa17.19■□□□□ 0.34
CTSD-201ENST00000236671 ALS2CR12Q96Q35 445 aa17.19■□□□□ 0.34
CTSD-201ENST00000236671 LRRC1Q9BTT6 524 aa17.19■□□□□ 0.34
CTSD-201ENST00000236671 DMGDHQ9UI17 866 aaKnown RBP17.19■□□□□ 0.34
CTSD-201ENST00000236671 SALL4Q9UJQ4 1053 aa17.19■□□□□ 0.34
CTSD-201ENST00000236671 FRMPD2Q68DX3 1309 aaPredicted RBP17.19■□□□□ 0.34
CTSD-201ENST00000236671 A0A0U1RQG5 324 aaPredicted RBP17.18■□□□□ 0.34
CTSD-201ENST00000236671 TCP1P17987 556 aaKnown RBP17.18■□□□□ 0.34
CTSD-201ENST00000236671 ADCY7P51828 1080 aa17.18■□□□□ 0.34
CTSD-201ENST00000236671 ATP2B2Q01814 1243 aa17.18■□□□□ 0.34
CTSD-201ENST00000236671 PDIA5Q14554 519 aa17.18■□□□□ 0.34
CTSD-201ENST00000236671 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.18■□□□□ 0.34
CTSD-201ENST00000236671 TBC1D16Q8TBP0 767 aa17.18■□□□□ 0.34
CTSD-201ENST00000236671 SNX29Q8TEQ0 813 aa17.18■□□□□ 0.34
CTSD-201ENST00000236671 DDX12PQ92771 950 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms