RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 PNMA1Q8ND90 353 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 ANKS1AQ92625 1134 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 MAD2L2Q9UI95 211 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 TMEM59LQ9UK28 342 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 KLRK1P26718 216 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 ATP2B2Q01814 1243 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 KCNMA1Q12791 1236 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 CEP85LQ5SZL2 805 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 UNC13DQ70J99 1090 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 CACNA2D4Q7Z3S7 1137 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 ARFGAP2Q8N6H7 521 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 CYFIP2Q96F07 1278 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 CD248Q9HCU0 757 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 ATP8A2Q9NTI2 1148 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 ARPP21Q9UBL0 812 aaPredicted RBP15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 MYH14Q7Z406 1995 aaKnown RBP15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 PVALEFA0A1B0GWK0 134 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 E7EVH7 732 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 RAD51CO43502 376 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 CYTH3O43739 400 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 TLR2O60603 784 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 MECOMQ03112 1051 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 SLC9C1Q4G0N8 1177 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 TDRD12Q587J7 1177 aaKnown RBP15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 NUCKS1Q9H1E3 243 aaKnown RBP15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 TAF1DQ9H5J8 278 aaPredicted RBP15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 H0YGN5 161 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 C21orf2O43822 256 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 FTCDO95954 541 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 SERPING1P05155 500 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 CAVIN4Q5BKX8 364 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 FOXR2Q6PJQ5 311 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 HEATR3Q7Z4Q2 680 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 USP38Q8NB14 1042 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 CRNKL1Q9BZJ0 848 aaKnown RBP15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 ISCUQ9H1K1 167 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 IL17RBQ9NRM6 502 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 SLC12A6Q9UHW9 1150 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 NFS1Q9Y697 457 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 DOT1LQ8TEK3 1739 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 KLRC1P26715 233 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 ECHS1P30084 290 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 UBE4AQ14139 1066 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 PREPLQ4J6C6 727 aaPredicted RBP15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 MAATS1Q7Z4T9 603 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 ACTR5Q9H9F9 607 aaPredicted RBP15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 SLC40A1Q9NP59 571 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 LUC7LQ9NQ29 371 aaKnown RBP15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 BLOC1S4Q9NUP1 217 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 CEP72Q9P209 647 aa15.41■□□□□ 0.06
SCNN1A-201ENST00000228916 MYMKA6NI61 221 aa15.4■□□□□ 0.06
SCNN1A-201ENST00000228916 ADAMTS2O95450 1211 aa15.4■□□□□ 0.06
SCNN1A-201ENST00000228916 TNNC1P63316 161 aa15.4■□□□□ 0.06
SCNN1A-201ENST00000228916 SV2BQ7L1I2 683 aa15.4■□□□□ 0.06
SCNN1A-201ENST00000228916 DONSONQ9NYP3 566 aa15.4■□□□□ 0.06
SCNN1A-201ENST00000228916 CES2O00748 559 aa15.4■□□□□ 0.06
SCNN1A-201ENST00000228916 NOL4O94818 638 aa15.4■□□□□ 0.06
SCNN1A-201ENST00000228916 KRT25Q7Z3Z0 450 aa15.4■□□□□ 0.06
SCNN1A-201ENST00000228916 CALML4Q96GE6 196 aa15.4■□□□□ 0.06
SCNN1A-201ENST00000228916 ZMYND12Q9H0C1 365 aa15.4■□□□□ 0.06
SCNN1A-201ENST00000228916 MINPP1Q9UNW1 487 aa15.4■□□□□ 0.06
SCNN1A-201ENST00000228916 GOLGA6L10A6NI86 522 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 BHMG1C9JSJ3 638 aaPredicted RBP15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 CCNT1O60563 726 aaKnown RBP15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 ZPR1O75312 459 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 HSD17B3P37058 310 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 TECP42680 631 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 ERVK-9P63128 1117 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 LETM2Q2VYF4 491 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 SFMBT2Q5VUG0 894 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 A0A0G2JS52 829 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 GMNCA6NCL1 334 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 GCOM1H8Y6P7 765 aaPredicted RBP15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 TRAPPC3O43617 180 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 MYZAPP0CAP1 466 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 HOXA7P31268 230 aaPredicted RBP15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 PSEN1P49768 467 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 GRB10Q13322 594 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 ITPK1Q13572 414 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 UAP1Q16222 522 aaPredicted RBP15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 SLC18A3Q16572 532 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 WLSQ5T9L3 541 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 PPANQ9NQ55 473 aaKnown RBP15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 STK17AQ9UEE5 414 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 MCM8Q9UJA3 840 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 ATP6V0A2Q9Y487 856 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 PRDX5P30044 214 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 HPDP32754 393 aaPredicted RBP15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 NT5C2P49902 561 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 DNA2P51530 1060 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 TFAP4Q01664 338 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 EHHADHQ08426 723 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 CUL1Q13616 776 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 NEDD9Q14511 834 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 ERFEQ4G0M1 354 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 FAM83BQ5T0W9 1011 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 CCDC121Q6ZUS5 278 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 NLRC4Q9NPP4 1024 aa15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 BSDC1Q9NW68 430 aaPredicted RBP15.39■□□□□ 0.05
SCNN1A-201ENST00000228916 DDX20Q9UHI6 824 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms