RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 RETREG2Q8NC44 543 aa16.22■□□□□ 0.19
CNOT3-201ENST00000221232 COG1Q8WTW3 980 aa16.22■□□□□ 0.19
CNOT3-201ENST00000221232 RIN2Q8WYP3 895 aaPredicted RBP16.22■□□□□ 0.19
CNOT3-201ENST00000221232 STK17AQ9UEE5 414 aa16.22■□□□□ 0.19
CNOT3-201ENST00000221232 PCDHA1Q9Y5I3 950 aa16.22■□□□□ 0.19
CNOT3-201ENST00000221232 DDX60LQ5H9U9 1706 aaKnown RBP16.22■□□□□ 0.19
CNOT3-201ENST00000221232 KRT18P05783 430 aaKnown RBP16.22■□□□□ 0.19
CNOT3-201ENST00000221232 MAN2A1Q16706 1144 aa16.22■□□□□ 0.19
CNOT3-201ENST00000221232 MYOCDQ8IZQ8 938 aa16.22■□□□□ 0.19
CNOT3-201ENST00000221232 PVALEFA0A1B0GWK0 134 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 SMARCA1P28370 1054 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 SLC1A4P43007 532 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 VAV2P52735 878 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 USP14P54578 494 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 MSL1Q68DK7 614 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 CCDC170Q8IYT3 715 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 GUF1Q8N442 669 aaKnown RBP16.21■□□□□ 0.19
CNOT3-201ENST00000221232 HNRNPLLQ8WVV9 542 aaKnown RBP16.21■□□□□ 0.19
CNOT3-201ENST00000221232 ZNF622Q969S3 477 aaKnown RBP eCLIP16.21■□□□□ 0.191e-6■■□□□ 11.5
CNOT3-201ENST00000221232 TRIM34Q9BYJ4 488 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 SALL4Q9UJQ4 1053 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 ZBTB5O15062 677 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 ZBTB22O15209 634 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 GDF11O95390 407 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 MYBL2P10244 700 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 EEF2P13639 858 aaKnown RBP16.21■□□□□ 0.19
CNOT3-201ENST00000221232 NT5C2P49902 561 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 SLC7A5Q01650 507 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 PDIA5Q14554 519 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 KCTD19Q17RG1 926 aaPredicted RBP16.21■□□□□ 0.19
CNOT3-201ENST00000221232 QRICH1Q2TAL8 776 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 PAPD7Q5XG87 772 aaKnown RBP16.21■□□□□ 0.19
CNOT3-201ENST00000221232 APOBEC3HQ6NTF7 200 aaKnown RBP16.21■□□□□ 0.19
CNOT3-201ENST00000221232 NFRKBQ6P4R8 1299 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 DNAAF5Q86Y56 855 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 HDAC7Q8WUI4 952 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 TSG101Q99816 390 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 COA1Q9GZY4 146 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 BCAS3Q9H6U6 928 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 PLAGL2Q9UPG8 496 aa16.21■□□□□ 0.19
CNOT3-201ENST00000221232 CCDC66A2RUB6 948 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 SNHG28P0DPA3 235 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 MAGEA1P43355 309 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 RNASE9P60153 205 aaKnown RBP16.2■□□□□ 0.18
CNOT3-201ENST00000221232 FAM26FQ5R3K3 315 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 LRRC55Q6ZSA7 311 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 GPBP1Q86WP2 473 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 SP8Q8IXZ3 490 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 DNAJC19Q96DA6 116 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 IGKV6D-41A0A0C4DH26 115 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 POTEFA5A3E0 1075 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 DDTLA6NHG4 134 aaPredicted RBP16.2■□□□□ 0.18
CNOT3-201ENST00000221232 USO1O60763 962 aaKnown RBP16.2■□□□□ 0.18
CNOT3-201ENST00000221232 HLA-DOAP06340 250 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 POTEIP0CG38 1075 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 NOVP48745 357 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 POLR2FP61218 127 aaKnown RBP16.2■□□□□ 0.18
CNOT3-201ENST00000221232 KCNMA1Q12791 1236 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 GPS2Q13227 327 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 PTPROQ16827 1216 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 PRR16Q569H4 304 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 POTEGQ6S5H5 508 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 POTEEQ6S8J3 1075 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 BMP2KQ9NSY1 1161 aaPredicted RBP16.2■□□□□ 0.18
CNOT3-201ENST00000221232 NAV1Q8NEY1 1877 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 PLA2G4BP0C869 781 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 PSMC6P62333 389 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 TEKT1Q969V4 418 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 CRAMP1Q96RY5 1269 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.2■□□□□ 0.18
CNOT3-201ENST00000221232 ATP6V0A2Q9Y487 856 aa16.2■□□□□ 0.18
CNOT3-201ENST00000221232 AFF2P51816 1311 aa16.19■□□□□ 0.18
CNOT3-201ENST00000221232 SBF2Q86WG5 1849 aa16.19■□□□□ 0.18
CNOT3-201ENST00000221232 ADRA2BP18089 450 aa16.19■□□□□ 0.18
CNOT3-201ENST00000221232 HOXA10P31260 410 aaPredicted RBP16.19■□□□□ 0.18
CNOT3-201ENST00000221232 SEPT2Q15019 361 aa16.19■□□□□ 0.18
CNOT3-201ENST00000221232 HSP90B2PQ58FF3 399 aa16.19■□□□□ 0.18
CNOT3-201ENST00000221232 SPICE1Q8N0Z3 855 aa16.19■□□□□ 0.18
CNOT3-201ENST00000221232 DNAJC18Q9H819 358 aa16.19■□□□□ 0.18
CNOT3-201ENST00000221232 LTBP4Q8N2S1 1624 aa16.19■□□□□ 0.18
CNOT3-201ENST00000221232 TULP1O00294 542 aaPredicted RBP16.19■□□□□ 0.18
CNOT3-201ENST00000221232 CYP4A11Q02928 519 aa16.19■□□□□ 0.18
CNOT3-201ENST00000221232 PABPC4Q13310 644 aaKnown RBP eCLIP16.19■□□□□ 0.182e-10■■■■□ 21.2
CNOT3-201ENST00000221232 TMEM119Q4V9L6 283 aa16.19■□□□□ 0.18
CNOT3-201ENST00000221232 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.19■□□□□ 0.18
CNOT3-201ENST00000221232 EHBP1Q8NDI1 1231 aa16.19■□□□□ 0.18
CNOT3-201ENST00000221232 LSM14BQ9BX40 385 aaKnown RBP16.19■□□□□ 0.18
CNOT3-201ENST00000221232 COL24A1Q17RW2 1714 aa16.18■□□□□ 0.18
CNOT3-201ENST00000221232 MAST2Q6P0Q8 1798 aa16.18■□□□□ 0.18
CNOT3-201ENST00000221232 TACC1O75410 805 aa16.18■□□□□ 0.18
CNOT3-201ENST00000221232 MED24O75448 989 aa16.18■□□□□ 0.18
CNOT3-201ENST00000221232 EIF3JO75822 258 aaKnown RBP16.18■□□□□ 0.18
CNOT3-201ENST00000221232 HOXA13P31271 388 aaPredicted RBP16.18■□□□□ 0.18
CNOT3-201ENST00000221232 PPP1R2P41236 205 aa16.18■□□□□ 0.18
CNOT3-201ENST00000221232 CRKP46108 304 aa16.18■□□□□ 0.18
CNOT3-201ENST00000221232 SLFN13Q68D06 897 aa16.18■□□□□ 0.18
CNOT3-201ENST00000221232 MS4A14Q96JA4 679 aa16.18■□□□□ 0.18
CNOT3-201ENST00000221232 P2RX7Q99572 595 aaKnown RBP16.18■□□□□ 0.18
CNOT3-201ENST00000221232 FGFR1OPO95684 399 aaKnown RBP16.18■□□□□ 0.18
CNOT3-201ENST00000221232 CLK2P49760 499 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms