RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 FAM228AQ86W67 206 aa16.51■□□□□ 0.23
PDZD4-201ENST00000164640 DZIP3Q86Y13 1208 aaKnown RBP16.51■□□□□ 0.23
PDZD4-201ENST00000164640 CCDC26Q8TAB7 109 aa16.51■□□□□ 0.23
PDZD4-201ENST00000164640 PACSIN1Q9BY11 444 aa16.51■□□□□ 0.23
PDZD4-201ENST00000164640 TMEM60Q9H2L4 133 aa16.51■□□□□ 0.23
PDZD4-201ENST00000164640 RNF14Q9UBS8 474 aa16.51■□□□□ 0.23
PDZD4-201ENST00000164640 CCT8L1PA6NM43 557 aa16.51■□□□□ 0.23
PDZD4-201ENST00000164640 KRT18P05783 430 aaKnown RBP16.51■□□□□ 0.23
PDZD4-201ENST00000164640 KIF5BP33176 963 aa16.51■□□□□ 0.23
PDZD4-201ENST00000164640 ADCY1Q08828 1119 aa16.51■□□□□ 0.23
PDZD4-201ENST00000164640 BIRC3Q13489 604 aa16.51■□□□□ 0.23
PDZD4-201ENST00000164640 WLSQ5T9L3 541 aa16.51■□□□□ 0.23
PDZD4-201ENST00000164640 GIGYF2Q6Y7W6 1299 aaKnown RBP16.51■□□□□ 0.23
PDZD4-201ENST00000164640 STAG2Q8N3U4 1231 aa16.51■□□□□ 0.23
PDZD4-201ENST00000164640 GIMAP8Q8ND71 665 aaPredicted RBP16.51■□□□□ 0.23
PDZD4-201ENST00000164640 RUBCNQ92622 972 aa16.51■□□□□ 0.23
PDZD4-201ENST00000164640 NSRP1Q9H0G5 558 aaKnown RBP16.51■□□□□ 0.23
PDZD4-201ENST00000164640 CNOT8Q9UFF9 292 aaKnown RBP16.51■□□□□ 0.23
PDZD4-201ENST00000164640 LACTBP83111 547 aaPredicted RBP16.51■□□□□ 0.23
PDZD4-201ENST00000164640 SRBD1Q8N5C6 995 aaKnown RBP16.51■□□□□ 0.23
PDZD4-201ENST00000164640 ANKRD42Q8N9B4 389 aa16.51■□□□□ 0.23
PDZD4-201ENST00000164640 NWD1Q149M9 1564 aa16.51■□□□□ 0.23
PDZD4-201ENST00000164640 CALM1P0DP23 149 aa16.5■□□□□ 0.23
PDZD4-201ENST00000164640 CALM2P0DP24 149 aa16.5■□□□□ 0.23
PDZD4-201ENST00000164640 CALM3P0DP25 149 aa16.5■□□□□ 0.23
PDZD4-201ENST00000164640 LRRC14Q15048 493 aa16.5■□□□□ 0.23
PDZD4-201ENST00000164640 MAN2A1Q16706 1144 aa16.5■□□□□ 0.23
PDZD4-201ENST00000164640 CCDC38Q502W7 563 aa16.5■□□□□ 0.23
PDZD4-201ENST00000164640 PRCCQ92733 491 aaPredicted RBP16.5■□□□□ 0.23
PDZD4-201ENST00000164640 PAIP2Q9BPZ3 127 aaKnown RBP16.5■□□□□ 0.23
PDZD4-201ENST00000164640 STX8Q9UNK0 236 aa16.5■□□□□ 0.23
PDZD4-201ENST00000164640 KDM6AO15550 1401 aaPredicted RBP16.5■□□□□ 0.23
PDZD4-201ENST00000164640 LRRC37A3O60309 1634 aa16.5■□□□□ 0.23
PDZD4-201ENST00000164640 USP17L12C9JPN9 530 aa16.5■□□□□ 0.23
PDZD4-201ENST00000164640 USP17L21D6R901 530 aa16.5■□□□□ 0.23
PDZD4-201ENST00000164640 CHN1P15882 459 aa16.5■□□□□ 0.23
PDZD4-201ENST00000164640 PLTPP55058 493 aa16.5■□□□□ 0.23
PDZD4-201ENST00000164640 SV2BQ7L1I2 683 aa16.5■□□□□ 0.23
PDZD4-201ENST00000164640 SHISA4Q96DD7 197 aa16.5■□□□□ 0.23
PDZD4-201ENST00000164640 ATXN2Q99700 1313 aaKnown RBP16.5■□□□□ 0.23
PDZD4-201ENST00000164640 GOLGA6L10A0A0M3HER8 536 aa16.5■□□□□ 0.23
PDZD4-201ENST00000164640 AP1G2O75843 785 aa16.5■□□□□ 0.23
PDZD4-201ENST00000164640 MRPL12P52815 198 aaKnown RBP16.5■□□□□ 0.23
PDZD4-201ENST00000164640 ATP11AP98196 1134 aa16.5■□□□□ 0.23
PDZD4-201ENST00000164640 ITIH3Q06033 890 aa16.5■□□□□ 0.23
PDZD4-201ENST00000164640 RBBP5Q15291 538 aaKnown RBP16.5■□□□□ 0.23
PDZD4-201ENST00000164640 PIK3R5Q8WYR1 880 aa16.5■□□□□ 0.23
PDZD4-201ENST00000164640 CALR3Q96L12 384 aaKnown RBP16.5■□□□□ 0.23
PDZD4-201ENST00000164640 TTI1O43156 1089 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 EVI5O60447 810 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 DYNLL1P63167 89 aaKnown RBP16.49■□□□□ 0.23
PDZD4-201ENST00000164640 TAF11Q15544 211 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 ASIC2Q16515 512 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 OTUD6AQ7L8S5 288 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 ARMC9Q7Z3E5 817 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 LRP10Q7Z4F1 713 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 SPDYE1Q8NFV5 336 aaPredicted RBP16.49■□□□□ 0.23
PDZD4-201ENST00000164640 XPO6Q96QU8 1125 aaKnown RBP16.49■□□□□ 0.23
PDZD4-201ENST00000164640 RASSF10A6NK89 507 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 SMIM24O75264 130 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 RHOBTB3O94955 611 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 FLT3P36888 993 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 TXNRD1Q16881 649 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 HOOK3Q86VS8 718 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 USP38Q8NB14 1042 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 PARD3BQ8TEW8 1205 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 PURBQ96QR8 312 aaKnown RBP16.49■□□□□ 0.23
PDZD4-201ENST00000164640 PRMT1Q99873 361 aaKnown RBP16.49■□□□□ 0.23
PDZD4-201ENST00000164640 TRPC6Q9Y210 931 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 JAG2Q9Y219 1238 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 ABCC12Q96J65 1359 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 PDHA1P08559 390 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 DENND2CQ68D51 928 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 TBC1D22AQ8WUA7 517 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 DDX17Q92841 729 aaKnown RBP16.49■□□□□ 0.23
PDZD4-201ENST00000164640 PLCB1Q9NQ66 1216 aa16.49■□□□□ 0.23
PDZD4-201ENST00000164640 PPP2R5BQ15173 497 aa16.48■□□□□ 0.23
PDZD4-201ENST00000164640 TMTC3Q6ZXV5 915 aa16.48■□□□□ 0.23
PDZD4-201ENST00000164640 HOOK2Q96ED9 719 aa16.48■□□□□ 0.23
PDZD4-201ENST00000164640 PPP1R12CQ9BZL4 782 aa16.48■□□□□ 0.23
PDZD4-201ENST00000164640 SPDYE3A6NKU9 549 aa16.48■□□□□ 0.23
PDZD4-201ENST00000164640 PGRMC1O00264 195 aaKnown RBP16.48■□□□□ 0.23
PDZD4-201ENST00000164640 ADAMTS3O15072 1205 aa16.48■□□□□ 0.23
PDZD4-201ENST00000164640 COPB2P35606 906 aa16.48■□□□□ 0.23
PDZD4-201ENST00000164640 CUL1Q13616 776 aa16.48■□□□□ 0.23
PDZD4-201ENST00000164640 ALX1Q15699 326 aa16.48■□□□□ 0.23
PDZD4-201ENST00000164640 RNF10Q8N5U6 811 aaKnown RBP16.48■□□□□ 0.23
PDZD4-201ENST00000164640 ERGIC2Q96RQ1 377 aa16.48■□□□□ 0.23
PDZD4-201ENST00000164640 TRIM51Q9BSJ1 452 aa16.48■□□□□ 0.23
PDZD4-201ENST00000164640 UBA5Q9GZZ9 404 aa16.48■□□□□ 0.23
PDZD4-201ENST00000164640 KAT6BQ8WYB5 2073 aa16.48■□□□□ 0.23
PDZD4-201ENST00000164640 LLGL1Q15334 1064 aa16.48■□□□□ 0.23
PDZD4-201ENST00000164640 FAM83BQ5T0W9 1011 aa16.48■□□□□ 0.23
PDZD4-201ENST00000164640 LRRC34Q8IZ02 419 aa16.48■□□□□ 0.23
PDZD4-201ENST00000164640 ZBTB38Q8NAP3 1195 aaPredicted RBP16.48■□□□□ 0.23
PDZD4-201ENST00000164640 AGAP11Q8TF27 550 aa16.48■□□□□ 0.23
PDZD4-201ENST00000164640 SH3GL3Q99963 347 aa16.48■□□□□ 0.23
PDZD4-201ENST00000164640 TRIM9Q9C026 710 aa16.48■□□□□ 0.23
PDZD4-201ENST00000164640 TTYH3Q9C0H2 523 aa16.48■□□□□ 0.23
PDZD4-201ENST00000164640 ISCUQ9H1K1 167 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms