RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 SARM1Q6SZW1 724 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 NSUN7Q8NE18 718 aaKnown RBP13.61□□□□□ -0.23
LMCD1-201ENST00000157600 STAG1Q8WVM7 1258 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.61□□□□□ -0.23
LMCD1-201ENST00000157600 PCDHA5Q9Y5H7 936 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 BAZ2BQ9UIF8 2168 aaKnown RBP13.61□□□□□ -0.23
LMCD1-201ENST00000157600 MADDQ8WXG6 1647 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 FOXP2O15409 715 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 LINC00301Q8NCQ3 95 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 CASP14P31944 242 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 COG7P83436 770 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 MED10Q9BTT4 135 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 SLC12A6Q9UHW9 1150 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 TTLL3Q9Y4R7 772 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 FAM186BQ8IYM0 893 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 THRAP3Q9Y2W1 955 aaKnown RBP13.61□□□□□ -0.23
LMCD1-201ENST00000157600 ARHGEF40Q8TER5 1519 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 ATP5HO75947 161 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 EHHADHQ08426 723 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 ZBTB17Q13105 803 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 VSTM4Q8IW00 320 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 TTC16Q8NEE8 873 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 SLC39A2Q9NP94 309 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 FRMPD1Q5SYB0 1578 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 DLATP10515 647 aaKnown RBP13.61□□□□□ -0.23
LMCD1-201ENST00000157600 SDR42E1Q8WUS8 393 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 MAGOHBQ96A72 148 aaKnown RBP13.61□□□□□ -0.23
LMCD1-201ENST00000157600 SCINQ9Y6U3 715 aa13.61□□□□□ -0.23
LMCD1-201ENST00000157600 C6orf118Q5T5N4 469 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 MMS19Q96T76 1030 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 TTC39CQ8N584 583 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 ZNF577Q9BSK1 485 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 PPARGP37231 505 aaPredicted RBP13.6□□□□□ -0.23
LMCD1-201ENST00000157600 AP3B2Q13367 1082 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 CLEC4GQ6UXB4 293 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 MRRFQ96E11 262 aaKnown RBP13.6□□□□□ -0.23
LMCD1-201ENST00000157600 NRBF2Q96F24 287 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 EFCC1Q9HA90 598 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 SH2B2O14492 632 aaPredicted RBP13.6□□□□□ -0.23
LMCD1-201ENST00000157600 BCAMP50895 628 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 MMEL1Q495T6 779 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 LRGUKQ96M69 825 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 RPS6KC1Q96S38 1066 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 SERPINI1Q99574 410 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 LOC102724428A0A0B4J2F2 783 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 LRRIQ4A6NIV6 560 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 CCND2P30279 289 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 MAPK4P31152 587 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 SIK1P57059 783 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 KIAA1586Q9HCI6 787 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 TXNDC9O14530 226 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 KIF22Q14807 665 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 SLFNL1Q499Z3 407 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 ZNF449Q6P9G9 518 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 PCGF5Q86SE9 256 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 MGARPQ8TDB4 240 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 CLIC4Q9Y696 253 aa13.6□□□□□ -0.23
LMCD1-201ENST00000157600 RASSF7Q02833 373 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 SGO2Q562F6 1265 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 FAM160B2Q86V87 743 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 USP21Q9UK80 565 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 HEG1Q9ULI3 1381 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 MIF4GDA9UHW6 222 aaKnown RBP13.59□□□□□ -0.23
LMCD1-201ENST00000157600 LMNAP02545 664 aaKnown RBP13.59□□□□□ -0.23
LMCD1-201ENST00000157600 BEGAINQ9BUH8 593 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 ESRRGP62508 458 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 ZYXQ15942 572 aaKnown RBP13.59□□□□□ -0.23
LMCD1-201ENST00000157600 NBPF9Q3BBW0 867 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 PDE11AQ9HCR9 933 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 LRRD1A4D1F6 860 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 PSMD6Q15008 389 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 LONRF3Q496Y0 759 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 PCDHB4Q9Y5E5 795 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 E9PCH4 1651 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 ECE1P42892 770 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 SUPT20HL1Q3ZLR7 823 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 SGK1O00141 431 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 PI4KBQ9UBF8 816 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 STX1BP61266 288 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 IGBP1P78318 339 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 PPP2R5DQ14738 602 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 ATG16L1Q676U5 607 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 ANKRD42Q8N9B4 389 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 MICAL1Q8TDZ2 1067 aa13.59□□□□□ -0.23
LMCD1-201ENST00000157600 KLC3Q6P597 504 aa13.58□□□□□ -0.23
LMCD1-201ENST00000157600 SLC26A4O43511 780 aa13.58□□□□□ -0.24
LMCD1-201ENST00000157600 BUB1O43683 1085 aa13.58□□□□□ -0.24
LMCD1-201ENST00000157600 CPP00450 1065 aa13.58□□□□□ -0.24
LMCD1-201ENST00000157600 ALAS1P13196 640 aa13.58□□□□□ -0.24
LMCD1-201ENST00000157600 KIF23Q02241 960 aaPredicted RBP13.58□□□□□ -0.24
LMCD1-201ENST00000157600 RASEFQ8IZ41 740 aa13.58□□□□□ -0.24
LMCD1-201ENST00000157600 DHX38Q92620 1227 aaKnown RBP13.58□□□□□ -0.24
LMCD1-201ENST00000157600 STK38LQ9Y2H1 464 aa13.58□□□□□ -0.24
LMCD1-201ENST00000157600 FRMPD2Q68DX3 1309 aaPredicted RBP13.58□□□□□ -0.24
LMCD1-201ENST00000157600 PNMA6FA0A0J9YX94 578 aa13.58□□□□□ -0.24
LMCD1-201ENST00000157600 TMEM232C9JQI7 657 aa13.58□□□□□ -0.24
LMCD1-201ENST00000157600 CCNE1P24864 410 aa13.58□□□□□ -0.24
LMCD1-201ENST00000157600 GYG1P46976 350 aa13.58□□□□□ -0.24
LMCD1-201ENST00000157600 PDCD2Q16342 344 aaPredicted RBP13.58□□□□□ -0.24
LMCD1-201ENST00000157600 DGKHQ86XP1 1220 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms