RNA–Protein interactions for RNA: ENST00000025008.9

RB1CC1-201, Transcript of RB1 inducible coiled-coil 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RB1CC1, Length 6,635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1-201ENST00000025008 TBK1Q9UHD2 729 aa17.24■□□□□ 0.35
RB1CC1-201ENST00000025008 GCFC2P16383 781 aaKnown RBP17.23■□□□□ 0.35
RB1CC1-201ENST00000025008 PITPNM3Q9BZ71 974 aa17.23■□□□□ 0.35
RB1CC1-201ENST00000025008 ZNF608Q9ULD9 1512 aaPredicted RBP17.23■□□□□ 0.35
RB1CC1-201ENST00000025008 RSBN1LQ6PCB5 846 aaPredicted RBP17.23■□□□□ 0.35
RB1CC1-201ENST00000025008 MRPL46Q9H2W6 279 aaKnown RBP17.23■□□□□ 0.35
RB1CC1-201ENST00000025008 YY1AP1Q9H869 796 aa17.23■□□□□ 0.35
RB1CC1-201ENST00000025008 PODXLO00592 558 aa17.23■□□□□ 0.35
RB1CC1-201ENST00000025008 ECE1P42892 770 aa17.23■□□□□ 0.35
RB1CC1-201ENST00000025008 LRRC63Q05C16 580 aa17.23■□□□□ 0.35
RB1CC1-201ENST00000025008 DYNC1I2Q13409 638 aaKnown RBP17.23■□□□□ 0.35
RB1CC1-201ENST00000025008 SNX1Q13596 522 aa17.23■□□□□ 0.35
RB1CC1-201ENST00000025008 TLR7Q9NYK1 1049 aaKnown RBP17.23■□□□□ 0.35
RB1CC1-201ENST00000025008 GOLGA8HP0CJ92 632 aa17.23■□□□□ 0.35
RB1CC1-201ENST00000025008 BRDTQ58F21 947 aaPredicted RBP17.23■□□□□ 0.35
RB1CC1-201ENST00000025008 NME8Q8N427 588 aa17.23■□□□□ 0.35
RB1CC1-201ENST00000025008 DACT3Q96B18 629 aaPredicted RBP17.23■□□□□ 0.35
RB1CC1-201ENST00000025008 HDAC11Q96DB2 347 aa17.23■□□□□ 0.35
RB1CC1-201ENST00000025008 IPO5O00410 1097 aaKnown RBP17.23■□□□□ 0.35
RB1CC1-201ENST00000025008 SH2B2O14492 632 aaPredicted RBP17.23■□□□□ 0.35
RB1CC1-201ENST00000025008 RFX6Q8HWS3 928 aa17.23■□□□□ 0.35
RB1CC1-201ENST00000025008 POLR2MP0CAP2 368 aa17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 DMP1Q13316 513 aaPredicted RBP17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 ZBTB38Q8NAP3 1195 aaPredicted RBP17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 GINS2Q9Y248 185 aa17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 MRPL11Q9Y3B7 192 aaKnown RBP17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 GMNCA6NCL1 334 aa17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 PFDN6O15212 129 aa17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 KCNA6P17658 529 aa17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 CACYBPQ9HB71 228 aaKnown RBP17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 MRPL47Q9HD33 250 aaKnown RBP17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 PLEKHG3A1L390 1219 aa17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 CPP00450 1065 aa17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 GNPTABQ3T906 1256 aa17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 SYT2Q8N9I0 419 aaPredicted RBP17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 MAGI2Q86UL8 1455 aa17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 CTTNBP2Q8WZ74 1663 aa17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 hCG_1984214I3L0E3 225 aa17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 SPAG7O75391 227 aa17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 NR5A1Q13285 461 aa17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 ATG16L1Q676U5 607 aa17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 FBXO11Q86XK2 927 aa17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 ZNF713Q8N859 430 aaPredicted RBP17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 CCDC138Q96M89 665 aa17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 AP1M1Q9BXS5 423 aa17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 FRMPD2Q68DX3 1309 aaPredicted RBP17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 INPP1P49441 399 aa17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 CCDC68Q9H2F9 335 aa17.22■□□□□ 0.35
RB1CC1-201ENST00000025008 RPS8P62241 208 aaKnown RBP17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 RESP18Q5W5W9 173 aa17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 ARL6IP4Q66PJ3 421 aaKnown RBP17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 PRPF31Q8WWY3 499 aaKnown RBP17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 EIF2AQ9BY44 585 aaKnown RBP17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 ABHD10Q9NUJ1 306 aa17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 TMEM191BP0C7N4 346 aa17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 LRRC41Q15345 812 aa17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 MUM1L1Q5H9M0 696 aa17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 ALKBH5Q6P6C2 394 aaKnown RBP17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 NRBF2Q96F24 287 aa17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 MID2Q9UJV3 735 aa17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 SPARCL1Q14515 664 aa17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 ZC3H18Q86VM9 953 aaKnown RBP17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 TMEM60Q9H2L4 133 aa17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 GCNT4Q9P109 453 aa17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 GFPT2O94808 682 aa17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 RHOT2Q8IXI1 618 aa17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 SIRT2Q8IXJ6 389 aa17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 TRIML2Q8N7C3 387 aa17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 KCNQ3O43525 872 aa17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 SAT1P21673 171 aa17.21■□□□□ 0.35
RB1CC1-201ENST00000025008 A6NJR5 290 aa17.21■□□□□ 0.34
RB1CC1-201ENST00000025008 MCF2LO15068 1137 aa17.21■□□□□ 0.34
RB1CC1-201ENST00000025008 LIFRP42702 1097 aa17.21■□□□□ 0.34
RB1CC1-201ENST00000025008 CYP4A11Q02928 519 aa17.21■□□□□ 0.34
RB1CC1-201ENST00000025008 GRAMD1BQ3KR37 738 aa17.21■□□□□ 0.34
RB1CC1-201ENST00000025008 CCDC144BQ3MJ40 725 aa17.21■□□□□ 0.34
RB1CC1-201ENST00000025008 PIP4K2CQ8TBX8 421 aa17.21■□□□□ 0.34
RB1CC1-201ENST00000025008 CFAP73A6NFT4 308 aa17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 ERVV-2B6SEH9 535 aa17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 NR1H3Q13133 447 aa17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 TTI1O43156 1089 aa17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 PRPF3O43395 683 aaKnown RBP17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 PDE8BO95263 885 aa17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 PIK3CAP42336 1068 aa17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 PABPC4Q13310 644 aaKnown RBP eCLIP17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 ZCCHC17Q9NP64 241 aaKnown RBP17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 SEPT10Q9P0V9 454 aa17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 IPO11Q9UI26 975 aaKnown RBP17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 IQANK1A0A1B0GTG1 560 aa17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 CAPN9O14815 690 aa17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 KPNA2P52292 529 aaKnown RBP17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 ZMAT2Q96NC0 199 aaKnown RBP17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 TRIM55Q9BYV6 548 aa17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 ORC6Q9Y5N6 252 aa17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 KRT1P04264 644 aa17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 NLRP14Q86W24 1093 aa17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 YIPF3Q9GZM5 350 aa17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 PCDHB6Q9Y5E3 794 aa17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 M0R2C6 588 aa17.2■□□□□ 0.34
RB1CC1-201ENST00000025008 FGGP02679 453 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms