RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 FAM184BQ9ULE4 1060 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 UTP11Q9Y3A2 253 aaKnown RBP11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 HMGCS2P54868 508 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 SNAPC2Q13487 334 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 PPP1R21Q6ZMI0 780 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 LINC00301Q8NCQ3 95 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 LPAR1Q92633 364 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 XPO4Q9C0E2 1151 aaKnown RBP11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 GGA3Q9NZ52 723 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 PXDNLA1KZ92 1463 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 CEP104O60308 925 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 AKR1B1P15121 316 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 IFRD2Q12894 506 aaPredicted RBP11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 CYB5R4Q7L1T6 521 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 TRIM50Q86XT4 487 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 FAM151AQ8WW52 585 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 CCDC94Q9BW85 323 aaPredicted RBP11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 DISC1Q9NRI5 854 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 SERPINA10Q9UK55 444 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 ZBTB12Q9Y330 459 aaPredicted RBP11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 TNPO2O14787 897 aaKnown RBP11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 ZNF157P51786 506 aaPredicted RBP11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 POLR2FP61218 127 aaKnown RBP11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 KRT81Q14533 505 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 SLFN12LQ6IEE8 588 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 GTF3C2Q8WUA4 911 aaPredicted RBP11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 FAM49AQ9H0Q0 323 aaPredicted RBP11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 KDM6AO15550 1401 aaPredicted RBP11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 NMT2O60551 498 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 MYO1EQ12965 1108 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 TAF1CQ15572 869 aaPredicted RBP11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 C8orf74Q6P047 294 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 P2RX5Q93086 422 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 FAM20AQ96MK3 541 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 FEZ2Q9UHY8 353 aaPredicted RBP11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 AMFRQ9UKV5 643 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 PCDHA5Q9Y5H7 936 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 K7ERI5 159 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 RHOXF2BP0C7M4 288 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 GYS1P13807 737 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 SFNP31947 248 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 FKBP3Q00688 224 aaKnown RBP11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 ORC2Q13416 577 aaPredicted RBP11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 CTTNQ14247 550 aaKnown RBP11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 MB21D2Q8IYB1 491 aaPredicted RBP11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 MCPH1Q8NEM0 835 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 CNOT6LQ96LI5 555 aaKnown RBP11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 RHOXF2Q9BQY4 288 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 MYOZ2Q9NPC6 264 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 KCNH4Q9UQ05 1017 aa11.33□□□□□ -0.6
NIPAL3-201ENST00000003912 SRGAP2CP0DJJ0 459 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 NSFP46459 744 aaKnown RBP11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 PRELPP51888 382 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 MCM6Q14566 821 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 COG2Q14746 738 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 SCYL2Q6P3W7 929 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 CATSPER4Q7RTX7 472 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 GPIHBP1Q8IV16 184 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 NEK9Q8TD19 979 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 NLRP4Q96MN2 994 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 PARK7Q99497 189 aaKnown RBP11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 RAB20Q9NX57 234 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 ITSN1Q15811 1721 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 ATP8B3O60423 1300 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 FLT1P17948 1338 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 WDR46O15213 610 aaKnown RBP11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 OATP04181 439 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 TFAMQ00059 246 aaKnown RBP11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 CACNB1Q02641 598 aaPredicted RBP11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 MTMR2Q13614 643 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 QRICH1Q2TAL8 776 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 RNF187Q5TA31 235 aaPredicted RBP11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 ZNF658Q5TYW1 1059 aaPredicted RBP11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 ATP6V0A4Q9HBG4 840 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 LY9Q9HBG7 655 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 RCOR1Q9UKL0 485 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 PCDHB6Q9Y5E3 794 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 GOLGA6CA6NDK9 693 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 GOLGA6BA6NDN3 693 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 GOLGA6DP0CG33 693 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 PLCG1P19174 1290 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 CDC42EP5Q6NZY7 148 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 ADGRF4Q8IZF3 695 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 GOLGA6AQ9NYA3 693 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 TMEM63CQ9P1W3 806 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 ASIC3Q9UHC3 531 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 PCDHB4Q9Y5E5 795 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 DYNC1I1O14576 645 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 AFPP02771 609 aaKnown RBP11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 EEF1GP26641 437 aaKnown RBP11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 KCNV1Q6PIU1 500 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 FBXO33Q7Z6M2 555 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 C7orf31Q8N865 590 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 ZNF280CQ8ND82 737 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 RAET1EQ8TD07 263 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 RPF1Q9H9Y2 349 aaKnown RBP11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 EMILIN3Q9NT22 766 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 WDR70Q9NW82 654 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 ABCB4P21439 1286 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms