RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Abhd8Q8R0P8 439 aa13.52□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Bzw1Q9CQC6 419 aaKnown RBP13.52□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Pacsin2Q9WVE8 486 aaKnown RBP13.52□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Psmd10Q9Z2X2 231 aa13.52□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Cul7Q8VE73 1689 aa13.52□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Lsp1P19973 330 aa13.52□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Ccdc138Q0VF22 680 aa13.52□□□□□ -0.25
Col6a3-208ENSMUST00000188587 NfkbibQ60778 359 aa13.52□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Ccdc77Q9CZH8 489 aa13.52□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Gm3402K7N5P2 326 aa13.52□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Miga1Q4QQM5 600 aa13.52□□□□□ -0.25
Col6a3-208ENSMUST00000188587 AsnsQ61024 561 aa13.52□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Zcchc18Q8VD24 393 aa13.52□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Rnf112Q96DY5 654 aa13.52□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Cttnbp2nlQ99LJ0 638 aa13.52□□□□□ -0.25
Col6a3-208ENSMUST00000188587 XlrP05531 208 aa13.52□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Ppp2r2cQ8BG02 447 aa13.52□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Glrx3Q9CQM9 337 aa13.52□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Klhl40Q9D783 621 aa13.52□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Hfm1D3Z4R1 1434 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Foxp3Q99JB6 429 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Clasp1Q80TV8 1535 aaKnown RBP13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Grin1P35438 938 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Ric8aQ3TIR3 530 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Arhgap17Q3UIA2 846 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 EsrrgP62509 458 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Mindy4Q3UQI9 744 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Ccdc65Q8VHI7 493 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Cox16Q9CR63 106 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Usp35M0QWN7 1009 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Serpind1P49182 478 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Dynlt1P51807 113 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 ArhgdiaQ99PT1 204 aaKnown RBP13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 PycardQ9EPB4 193 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Apol11bE9PUZ0 337 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Serpinb6eI7HJI3 429 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Tm6sf1P58749 370 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Zc3h18Q0P678 948 aaKnown RBP13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Gm4340L7N2C4 268 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Orc4O88708 433 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 MycP01108 439 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Slc12a1P55014 1095 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Fam208aQ69ZR9 1610 aaKnown RBP13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Ddx19bQ8BZY3 494 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Ecel1Q9JMI0 775 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Eif2ak1Q9Z2R9 619 aa13.51□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Lamc2Q61092 1191 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Baiap3Q80TT2 1134 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Dis3l2Q8CI75 870 aaKnown RBP13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 LgsnQ8CIX8 563 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Sytl1Q99N80 567 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Cdc42bpaQ3UU96 1719 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Arhgap42B2RQE8 841 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Pde8bE9Q4S1 865 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Cyth3O08967 399 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Kcnk9Q3LS21 402 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Ovgp1Q62010 721 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Zbed4Q80WQ9 1168 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Zswim7Q9CWQ2 152 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 G3bp2P97379 482 aaKnown RBP13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 PrimpolQ6P1E7 537 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Me3Q8BMF3 604 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 LzicQ8K3C3 190 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Pdzd8B9EJ80 1147 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Aggf1Q7TN31 711 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Acad11Q80XL6 779 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Creb3l3Q91XE9 479 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 4931423N10RikQ9D4J9 382 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Popdc2Q9ES82 367 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Mmrn2A6H6E2 943 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 NficP70255 439 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Rd3Q8BRE0 195 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Clic4Q9QYB1 253 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Lipo1J3QME6 396 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Tbc1d30Q69ZT9 766 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Cnot10Q8BH15 744 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Copb1Q9JIF7 953 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 FliiQ9JJ28 1271 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Aldh18a1Q9Z110 795 aa13.5□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Cdk5rap2Q8K389 1822 aa13.49□□□□□ -0.25
Col6a3-208ENSMUST00000188587 A0A1Y7VML8 143 aa13.49□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Zbtb7aO88939 569 aaKnown RBP13.49□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Thumpd3P97770 505 aa13.49□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Sec23ipQ6NZC7 998 aa13.49□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Sulf1Q8K007 870 aa13.49□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Tbc1d22aQ8R5A6 516 aa13.49□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Tulp1Q9Z273 543 aa13.49□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Usp54Q8BL06 1588 aaKnown RBP13.49□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Creb3Q61817 404 aa13.49□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Nrbf2Q8VCQ3 287 aa13.49□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Ppp1r16bQ8VHQ3 568 aa13.49□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Ubxn2aQ99KJ0 258 aa13.49□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Raph1F2Z3U3 1266 aa13.49□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Gga1Q8R0H9 635 aa13.49□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Plcg1Q62077 1302 aa13.49□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Tex13cD3YU32 604 aa13.49□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Fam81aQ3UXZ6 364 aa13.49□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Ankrd42Q3V096 527 aa13.49□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Ushbp1Q8R370 680 aa13.49□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Tmed2Q9R0Q3 201 aa13.49□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms