RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Nol4P60954 483 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Atp8b2P98199 1209 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Ckap2Q3V1H1 664 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Bbs7Q8K2G4 715 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Chmp1b1Q99LU0 199 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 PogzQ8BZH4 1409 aaKnown RBP17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 E2f8Q58FA4 860 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Ddx42Q810A7 929 aaKnown RBP17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Zkscan8Q8BSL0 588 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Khdc3Q9CWU5 440 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Slc2a5Q9WV38 501 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Frmpd2A0A140LI67 1392 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Krt1P04104 637 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Fam169aQ5XG69 665 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 BcrQ6PAJ1 1270 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Serpinb3bQ9D1Q5 387 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Ap2b1Q9DBG3 937 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Calb1P12658 261 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Fam167bP17257 162 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Foxred2Q3USW5 665 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Asap2Q7SIG6 958 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 HadhaQ8BMS1 763 aaKnown RBP17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Rassf9Q8K342 435 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Sapcd2Q9D818 391 aa17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Zcchc17Q9ESX4 241 aaKnown RBP17.84■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Ovgp1Q62010 721 aa17.83■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Krt87Q6IMF0 495 aa17.83■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Stkld1Q80YS9 662 aa17.83■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Q80ZQ3 298 aa17.83■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Ppp2r2cQ8BG02 447 aa17.83■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Osbpl5Q9ER64 874 aa17.83■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Bpifb4A2BGH0 617 aa17.83■□□□□ 0.45
Ubr3-202ENSMUST00000112251 AF366264G3X9P9 502 aa17.83■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Ccdc151Q8BSN3 593 aa17.83■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Slc8a2Q8K596 921 aa17.83■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Rab14Q91V41 215 aaKnown RBP17.83■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Hormad1Q9D5T7 392 aa17.83■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Ecel1Q9JMI0 775 aa17.83■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Clec11aO88200 328 aa17.83■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Lmnb2P21619 596 aaKnown RBP17.83■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Efcab8Q8C9R9 203 aa17.83■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Pcdhb22Q91XZ8 794 aa17.83■□□□□ 0.45
Ubr3-202ENSMUST00000112251 Tom1O88746 492 aa17.83■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Inpp1P49442 396 aa17.83■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Faf2Q3TDN2 445 aa17.83■□□□□ 0.44
Ubr3-202ENSMUST00000112251 PrimpolQ6P1E7 537 aa17.83■□□□□ 0.44
Ubr3-202ENSMUST00000112251 NfkbizQ9EST8 728 aa17.83■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Gadl1Q80WP8 550 aa17.83■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Tmem232Q5K6N0 675 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Rgl1Q60695 768 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Gramd1bQ80TI0 738 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Vmn1r214Q8R279 367 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Dtnbp1Q91WZ8 352 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Sh3bp5lQ99LH9 392 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Krt24A1L317 512 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Ifi206G3UZV2 921 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 MycP01108 439 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 TfamP40630 243 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Trim37Q6PCX9 961 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Ctnnd1P30999 938 aaKnown RBP17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Lzts1P60853 599 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Itga6Q61739 1091 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Emilin1Q99K41 1017 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Mlh1Q9JK91 760 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 NrkQ9R0G8 1455 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Acnat1A2AKK5 416 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Ttc17E9PVB5 1198 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Idh1O88844 414 aaKnown RBP17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Hddc2Q3SXD3 199 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 NntQ61941 1086 aaKnown RBP17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Stx18Q8VDS8 334 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Tcp1P11983 556 aaKnown RBP17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Znf667Q2TL60 609 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Nom1Q3UFM5 854 aaKnown RBP17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Vwa5aQ99KC8 793 aaKnown RBP17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Ric8aQ3TIR3 530 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Slc6a15Q8BG16 729 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Nol6Q8R5K4 1152 aaKnown RBP17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Them5Q9CQJ0 248 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Med7Q9CZB6 233 aa17.82■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Synj1Q8CHC4 1574 aa17.81■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Gm21962L7N280 338 aa17.81■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Ddb1Q3U1J4 1140 aaKnown RBP17.81■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Pex11aQ9Z211 246 aa17.81■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Sec24cG3X972 1096 aaKnown RBP17.81■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Pcgf5Q3UK78 256 aa17.81■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Ppp1r1bQ60829 194 aa17.81■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Hpcal4Q8BGZ1 191 aa17.81■□□□□ 0.44
Ubr3-202ENSMUST00000112251 CtcflA2APF3 636 aa17.81■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Gm8879F6R3J9 157 aa17.81■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Psmc3O88685 442 aa17.81■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Prim1P20664 417 aa17.81■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Tpp2Q64514 1262 aa17.81■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Q80Y73 168 aa17.81■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Gm29133A0A1B0GT72 266 aa17.81■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Stam2O88811 523 aa17.81■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Syt2P46097 422 aa17.81■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Ano9P86044 747 aa17.81■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Anp32cQ64G17 123 aa17.81■□□□□ 0.44
Ubr3-202ENSMUST00000112251 Cog3Q8CI04 820 aa17.81■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms