RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Mfap3lQ9D3X9 409 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Ppp1r12aQ9DBR7 1029 aaKnown RBP11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Rgs12Q8CGE9 1381 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Cpb1B2RS76 415 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 P4hbP09103 509 aaKnown RBP11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Gm1604bQ3TRG0 118 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Miga1Q4QQM5 600 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Hps6Q8BLY7 805 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Ndc80Q9D0F1 642 aaKnown RBP11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Aldh18a1Q9Z110 795 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Map3k19E9Q3S4 1311 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Usp19Q3UJD6 1360 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 DohhA0A1Y7VJ29 135 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 StrnO55106 780 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Sema3fO88632 785 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Eif4a1P60843 406 aaKnown RBP11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Ulk3Q3U3Q1 472 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Mylk3Q3UIZ8 795 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Prpf38aQ4FK66 312 aaKnown RBP11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Ddx42Q810A7 929 aaKnown RBP11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Adprhl2Q8CG72 370 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Adrm1Q9JKV1 407 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Vstm4T1NXB5 319 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Pja1O55176 578 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Cyp11b2P15539 500 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Rsad1Q5SUV1 442 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Clic6Q8BHB9 596 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Nudcd3Q8R1N4 363 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Ciao1Q99KN2 339 aa11.55□□□□□ -0.56
Vcan-202ENSMUST00000109544 Ccnyl1D3YUJ3 367 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Gm3415J3QMS8 315 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Aoc3O70423 765 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Alox15P39654 663 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Il15P48346 162 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Foxp2P58463 714 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Serpinb6Q60854 378 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Tbc1d30Q69ZT9 766 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Slc39a6Q8C145 765 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Ints9Q8K114 658 aaKnown RBP11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Serpinb3bQ9D1Q5 387 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Rbm31yQ9D3U4 565 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Gm3404Q9D506 307 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 FliiQ9JJ28 1271 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Add3Q9QYB5 706 aaKnown RBP11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Sox5P35710 763 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Arl4cP61208 192 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 E2f8Q58FA4 860 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Snx19Q6P4T1 997 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 C2cd5Q7TPS5 1016 aaKnown RBP11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Slc12a6Q924N4 1150 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Hps4Q99KG7 671 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Rpa3Q9CQ71 121 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Them5Q9CQJ0 248 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Syf2Q9D198 242 aaKnown RBP11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 EcsitQ9QZH6 435 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Psmd10Q9Z2X2 231 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Sec24cG3X972 1096 aaKnown RBP11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Atp6v1e1P50518 226 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Cep126Q0VBV7 1103 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Hsdl2Q2TPA8 490 aaKnown RBP11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Yipf3Q3UDR8 347 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Asap3Q5U464 904 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Tmem132dQ76HP3 1097 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Bbs9Q811G0 885 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Trim35Q8C006 501 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 E4f1Q8CCE9 783 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Rmdn1Q9DCV4 305 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Tmem191cQ9JJB1 302 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Stk11Q9WTK7 436 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Trim43aQ3TL54 445 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Dab2ipQ3UHC7 1189 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Lca5Q80ST9 704 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Lsm14bQ8CGC4 385 aaKnown RBP11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Ranbp17Q99NF8 1088 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 KynuQ9CXF0 464 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Ncoa3O09000 1398 aa11.54□□□□□ -0.56
Vcan-202ENSMUST00000109544 Gm28360A0A087WR25 190 aa11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 Apol11bE9PUZ0 337 aa11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 Pdcd2P46718 343 aa11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 Upf3bQ3ULL6 472 aa11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 Spag6Q3V0U9 509 aa11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 Znf598Q80YR4 908 aaKnown RBP11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 Zfp418Q8BFS8 652 aa11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 F13a1Q8BH61 732 aa11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 Stn1Q8K2X3 378 aa11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 Setd3Q91WC0 594 aa11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 Apol8A2VDH7 339 aaKnown RBP11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 Serpinb8O08800 374 aaKnown RBP11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 Chl1P70232 1209 aa11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 Ppp2r2aQ6P1F6 447 aa11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 Ctdspl2Q8BG15 465 aa11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 Fsd1lQ8BYN5 507 aa11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 Hdac11Q91WA3 347 aa11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 St13Q99L47 371 aaKnown RBP11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 Gm29133A0A1B0GT72 266 aa11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 Serpina1bP22599 413 aa11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 NostrinQ6WKZ7 506 aa11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 Trim36Q80WG7 729 aa11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 Fra10ac1Q8BP78 315 aa11.53□□□□□ -0.56
Vcan-202ENSMUST00000109544 Slc18a1Q8R090 521 aa11.53□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 77.3 ms