RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Ppm1eQ80TL0 749 aa20.27■□□□□ 0.83
Trim47-202ENSMUST00000106441 Cyp4f39Q8BGU0 532 aa20.27■□□□□ 0.83
Trim47-202ENSMUST00000106441 Ppp2r5dQ91V89 594 aa20.27■□□□□ 0.83
Trim47-202ENSMUST00000106441 Mtmr4Q91XS1 1190 aa20.27■□□□□ 0.83
Trim47-202ENSMUST00000106441 Cabp7Q91ZM8 215 aa20.27■□□□□ 0.83
Trim47-202ENSMUST00000106441 PdgfdQ925I7 370 aa20.27■□□□□ 0.83
Trim47-202ENSMUST00000106441 SmapQ9R0P4 181 aaKnown RBP20.27■□□□□ 0.83
Trim47-202ENSMUST00000106441 Psmd10Q9Z2X2 231 aa20.27■□□□□ 0.83
Trim47-202ENSMUST00000106441 Pagr1bF6V0H0 108 aa20.26■□□□□ 0.83
Trim47-202ENSMUST00000106441 Krt18P05784 423 aa20.26■□□□□ 0.83
Trim47-202ENSMUST00000106441 Alppl2P24823 529 aa20.26■□□□□ 0.83
Trim47-202ENSMUST00000106441 Pafah1b1P63005 410 aaKnown RBP20.26■□□□□ 0.83
Trim47-202ENSMUST00000106441 Stim2P83093 746 aa20.26■□□□□ 0.83
Trim47-202ENSMUST00000106441 Armc2Q3URY6 854 aa20.26■□□□□ 0.83
Trim47-202ENSMUST00000106441 Fkbp3Q62446 224 aaKnown RBP20.26■□□□□ 0.83
Trim47-202ENSMUST00000106441 Trex1Q91XB0 314 aa20.26■□□□□ 0.83
Trim47-202ENSMUST00000106441 Pagr1aQ99L02 253 aa20.26■□□□□ 0.83
Trim47-202ENSMUST00000106441 Coro7Q9D2V7 922 aa20.26■□□□□ 0.83
Trim47-202ENSMUST00000106441 Trmt112Q9DCG9 125 aa20.26■□□□□ 0.83
Trim47-202ENSMUST00000106441 TicrrQ8BQ33 1889 aa20.26■□□□□ 0.83
Trim47-202ENSMUST00000106441 PurbO35295 324 aaKnown RBP20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Prkg1P0C605 671 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Ifnar1P33896 590 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Mmp20P57748 482 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Hmgb1P63158 215 aaKnown RBP20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Znf697Q569E7 569 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 PRAG1Q571I4 1179 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 WaplQ65Z40 1200 aaKnown RBP20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Senp6Q6P7W0 1132 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Mtss1lQ6P9S0 715 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Sdad1Q80UZ2 687 aaKnown RBP20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Washc1Q8VDD8 475 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 EpgnQ924X1 152 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Krt82Q99M74 516 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Ppp1r3gQ9CW07 347 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Pitpnm2Q6ZPQ6 1335 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Apol7aB2RT54 418 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 A430078G23RikE9Q7Y4 484 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Arhgap6O54834 987 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Ssrp1Q08943 708 aaKnown RBP20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 NeblQ0II04 452 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Zfp781Q0P5U5 243 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 HrQ61645 1182 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Zbtb39Q6PDK0 712 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Cep95Q8BVV7 827 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Trim9Q8C7M3 817 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Rhobtb3Q9CTN4 611 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 FignQ9ERZ6 759 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Tmem47Q9JJG6 181 aa20.25■□□□□ 0.83
Trim47-202ENSMUST00000106441 Gm42641I6L9G2 585 aa20.24■□□□□ 0.83
Trim47-202ENSMUST00000106441 MycnP03966 462 aaKnown RBP20.24■□□□□ 0.83
Trim47-202ENSMUST00000106441 Msh3P13705 1091 aa20.24■□□□□ 0.83
Trim47-202ENSMUST00000106441 Kifap3P70188 793 aa20.24■□□□□ 0.83
Trim47-202ENSMUST00000106441 Spata21Q8BHW6 681 aa20.24■□□□□ 0.83
Trim47-202ENSMUST00000106441 AtripQ8BMG1 785 aa20.24■□□□□ 0.83
Trim47-202ENSMUST00000106441 Ttll1Q91V51 423 aa20.24■□□□□ 0.83
Trim47-202ENSMUST00000106441 Snrnp35Q9D384 244 aa20.24■□□□□ 0.83
Trim47-202ENSMUST00000106441 Lonrf3Q9D4H7 753 aa20.24■□□□□ 0.83
Trim47-202ENSMUST00000106441 Mkrn1Q9QXP6 481 aa20.24■□□□□ 0.83
Trim47-202ENSMUST00000106441 Angptl3Q9R182 455 aa20.24■□□□□ 0.83
Trim47-202ENSMUST00000106441 Ppp2r3dQ9Z176 491 aa20.24■□□□□ 0.83
Trim47-202ENSMUST00000106441 GsdmeQ9Z2D3 512 aa20.24■□□□□ 0.83
Trim47-202ENSMUST00000106441 Etnk2A7MCT6 385 aa20.24■□□□□ 0.83
Trim47-202ENSMUST00000106441 Ppfia4B8QI36 1187 aa20.24■□□□□ 0.83
Trim47-202ENSMUST00000106441 Foxn2E9Q7L6 429 aa20.24■□□□□ 0.83
Trim47-202ENSMUST00000106441 Slc39a2G3X943 309 aa20.24■□□□□ 0.83
Trim47-202ENSMUST00000106441 Ccna1Q61456 421 aa20.24■□□□□ 0.83
Trim47-202ENSMUST00000106441 Cmtr1Q9DBC3 837 aa20.24■□□□□ 0.83
Trim47-202ENSMUST00000106441 Mtmr9Q9Z2D0 545 aa20.24■□□□□ 0.83
Trim47-202ENSMUST00000106441 Cct6aP80317 531 aaKnown RBP20.23■□□□□ 0.83
Trim47-202ENSMUST00000106441 Zfp953Q3UPV7 304 aa20.23■□□□□ 0.83
Trim47-202ENSMUST00000106441 Ccdc88aQ5SNZ0 1873 aa20.23■□□□□ 0.83
Trim47-202ENSMUST00000106441 Lrrc15Q80X72 579 aa20.23■□□□□ 0.83
Trim47-202ENSMUST00000106441 Psma7Q9Z2U0 248 aa20.23■□□□□ 0.83
Trim47-202ENSMUST00000106441 Acot10Q32MW3 439 aa20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Psg29Q3URN6 468 aa20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Foxn3Q499D0 457 aa20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Asic1Q6NXK8 526 aa20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 PodnQ7TQ62 611 aa20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Trub2Q91WG3 331 aaKnown RBP20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Eef1gQ9D8N0 437 aaKnown RBP20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Armc3A2AU72 881 aa20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Hnrnph3D3Z3N4 346 aaKnown RBP20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Nfil3O08750 462 aa20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Nol4P60954 483 aa20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Slc10a4Q3UEZ8 437 aa20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Eme2Q56A04 373 aa20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Acbd5Q5XG73 508 aa20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Sdccag8Q80UF4 717 aa20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Camsap3Q80VC9 1252 aa20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Lrsam1Q80ZI6 727 aa20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Kctd3Q8BFX3 815 aa20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Scfd2Q8BTY8 684 aa20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Znf131Q8K3J5 619 aa20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Rbm19Q8R3C6 952 aaKnown RBP20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Rpf2Q9JJ80 306 aaKnown RBP20.22■□□□□ 0.83
Trim47-202ENSMUST00000106441 Gm1993A6X8I0 212 aa20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 SlxD3Z347 212 aa20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 RaraP11416 462 aa20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 Dlg1Q811D0 905 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms