RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Ptk7Q8BKG3 1062 aa9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Strip1Q8C079 837 aa9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Nlrp4bQ8C6J9 863 aa9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Cfap61Q8CEL2 1252 aa9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Cox10Q8CFY5 443 aa9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Rpn1Q91YQ5 608 aaKnown RBP9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 S100pbpQ9D5K4 396 aa9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Xpo7Q9EPK7 1087 aa9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Slc12a4Q9JIS8 1085 aa9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Tex21Q9R0U9 575 aa9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Mapk13Q9Z1B7 366 aa9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Cpa3P15089 417 aa9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Sox11Q7M6Y2 395 aa9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Sulf1Q8K007 870 aa9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Prmt3Q922H1 532 aa9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Nop2Q922K7 793 aaKnown RBP9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Acnat2Q8BGG9 420 aa9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 FtoQ8BGW1 502 aa9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Rassf9Q8K342 435 aa9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Slc22a19Q8VCA0 551 aa9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 BrapQ99MP8 591 aa9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Abcg8Q9DBM0 673 aa9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Zc3h8Q9JJ48 305 aaKnown RBP9.73□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Clip1Q922J3 1391 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Atp5bP56480 529 aaKnown RBP9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Znf532Q6NXK2 1036 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Ublcp1Q8BGR9 318 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Rhot2Q8JZN7 620 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Gtpbp10Q8K013 366 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Tdrd7Q8K1H1 1086 aaKnown RBP9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Bud13Q8R149 637 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 TkfcQ8VC30 578 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Cnpy3Q9DAU1 276 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Rapgef4Q9EQZ6 1011 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Slfn1Q9Z0I7 337 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Cbfa2t3O54972 620 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Mcm5P49718 733 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Sesn1P58006 492 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Emilin2Q8K482 1074 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Sapcd1Q9CY86 146 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Usp31E9Q6Y8 1344 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Mroh5E9PUJ8 762 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Yjefn3F6W8I0 251 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Myd88P22366 296 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Larp7Q05CL8 570 aaKnown RBP9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Smarcc2Q6PDG5 1213 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Thap12Q9CUX1 758 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Dach1Q9QYB2 751 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Neurod4O09105 330 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Abcb1bP06795 1276 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Sept1P42209 366 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Fam47cQ14BE7 430 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Ica1lQ3TY65 431 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Usp13Q5BKP2 858 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Kcna6Q61923 529 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Lemd2Q6DVA0 511 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Trim56Q80VI1 734 aaKnown RBP9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Scara3Q8C850 606 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Arhgap29Q8CGF1 1266 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Mtfr1Q99MB2 328 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Ribc1Q9D0B8 379 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Tnfrsf10bQ9QZM4 381 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Extl3Q9WVL6 918 aa9.72□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Duxf3A0A0N4SV92 674 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Cacnb3P54285 484 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Q3TTL0 348 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Crtc2Q3U182 692 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 SkilQ60665 675 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Hacd3Q8K2C9 362 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Dpp6Q9Z218 804 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Pramef17A2ASJ1 475 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Zfp174B9EJW5 407 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Tspyl1O88852 379 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Zmat1Q3V0C1 714 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Q3V0E1 1183 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 GpkowQ56A08 488 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Gramd4Q8CB44 633 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Abcf2Q99LE6 628 aaKnown RBP9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Ndufa5Q9CPP6 116 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 DhdhQ9DBB8 333 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Etnk2A7MCT6 385 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Kif23E9Q5G3 953 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Metap2O08663 478 aaKnown RBP9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 ZfxP17012 799 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Mtx1P47802 317 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 MycbpapQ5SUV2 932 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Ccser1Q8C0C4 895 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Ssfa2Q922B9 1252 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Rassf3Q99P51 232 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Cog8Q9JJA2 640 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 PdcQ9QW08 244 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Atp1a4Q9WV27 1032 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Mx2Q9WVP9 655 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Stk39Q9Z1W9 556 aa9.71□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Alox12P39655 663 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Atxn1P54254 791 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Pde3bQ61409 1100 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Ddx58Q6Q899 926 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Tdpoz3Q717B4 365 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Ano5Q75UR0 904 aa9.71□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms