RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Ccdc33Q3ULW6 985 aa7.92□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Slc10a5Q5PT54 434 aa7.92□□□□□ -1.14
Clrn1-202ENSMUST00000055636 PigsQ6PD26 555 aaKnown RBP7.92□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Krit1Q6S5J6 736 aa7.92□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Mettl5Q8K1A0 209 aa7.92□□□□□ -1.14
Clrn1-202ENSMUST00000055636 BlmhQ8R016 455 aa7.92□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Trex1Q91XB0 314 aa7.92□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Klra17Q9JMA4 273 aa7.92□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Col1a1P11087 1453 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Zfp831A2ADM8 1628 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 LdhaP06151 332 aaKnown RBP7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Tmem35bQ3U0Y2 150 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Ccdc42Q5SV66 316 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Ccdc148Q6P5U8 527 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 ErfeQ6PGN1 340 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Ccdc181Q80ZU5 509 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Slc9b1Q8C0X2 565 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Vcpip1Q8CDG3 1220 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Prl7b1Q8CGZ9 251 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Kiaa1024Q8K3V7 917 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Erlin1Q91X78 346 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Grin3bQ91ZU9 1003 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Ccdc43Q9CR29 222 aaKnown RBP7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Calml3Q9D6P8 149 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Borcs6Q9D6W8 360 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Klc4Q9DBS5 619 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Slc5a4aQ9ET37 656 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Pex3Q9QXY9 372 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Zfp853A0A1D5RM95 733 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Etnk2A7MCT6 385 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 ErmardE9Q048 622 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Gm10378F6XQQ1 160 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 MybP06876 636 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Pafah1b1P63005 410 aaKnown RBP7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Ddx49Q4FZF3 480 aaKnown RBP7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Tnni3kQ5GIG6 834 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Mindy1Q76LS9 468 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 F13a1Q8BH61 732 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 WdpcpQ8C456 722 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Mmgt1Q8K273 131 aaKnown RBP7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Tmem134Q8R0J4 195 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Pspc1Q8R326 523 aaKnown RBP7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Rab3il1Q8VDV3 383 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Anapc4Q91W96 807 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 CutaQ9CQ89 177 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Fsip1Q9D3V5 435 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Txnrd2Q9JLT4 524 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Prl2c5Q9JLV9 222 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Tnip1Q9WUU8 647 aa7.91□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Otud7bB2RUR8 840 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Sec24cG3X972 1096 aaKnown RBP7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Parp1P11103 1013 aaKnown RBP7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Hmgb2P30681 210 aaKnown RBP7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Mcm5P49718 733 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Irx1P81068 480 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Sec31aQ3UPL0 1230 aaKnown RBP7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Rhpn1Q61085 643 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Asic3Q6X1Y6 530 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Aggf1Q7TN31 711 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Arhgef19Q8BWA8 802 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Traf3ip3Q8C0G2 513 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Fermt2Q8CIB5 680 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Eif3hQ91WK2 352 aaKnown RBP7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Ubxn6Q99PL6 442 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 MymkQ9D1N4 221 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Ascc1Q9D8Z1 356 aaKnown RBP7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 CsadQ9DBE0 493 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Sertad1Q9JL10 236 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Ccdc88cQ6VGS5 2009 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Gm5934D3Z4U6 212 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Akr1b10G5E895 316 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Tal1P22091 329 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Aco1P28271 889 aaKnown RBP7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Lig3P97386 1015 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Scnn1aQ61180 699 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Ddx3xQ62167 662 aaKnown RBP7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Gpbp1Q6NXH3 473 aaKnown RBP7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Txndc16Q7TN22 820 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 WhrnQ80VW5 918 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 LRWD1Q8BUI3 648 aaKnown RBP7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Q91WD4 421 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Tmem191cQ9JJB1 302 aa7.9□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Ep400Q8CHI8 3072 aaKnown RBP7.9□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Sec14l1A8Y5H7 715 aa7.89□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Tex13cD3YU32 604 aa7.89□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Ankrd35E9Q9D8 996 aa7.89□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Lrrc32G3XA59 663 aa7.89□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Mybl2P48972 704 aa7.89□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Tex11Q14AT2 947 aa7.89□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Ankrd13cQ3UX43 541 aa7.89□□□□□ -1.15
Clrn1-202ENSMUST00000055636 PRAG1Q571I4 1179 aa7.89□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Hoxa13Q62424 386 aa7.89□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Sp4Q62445 782 aa7.89□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Rassf10Q8BL43 508 aa7.89□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Armc6Q8BNU0 468 aa7.89□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Parp10Q8CIE4 960 aa7.89□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Trub2Q91WG3 331 aaKnown RBP7.89□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Ndufab1Q9CR21 156 aa7.89□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Six6os1Q9CTN5 574 aa7.89□□□□□ -1.15
Clrn1-202ENSMUST00000055636 2310002L09RikQ9D7L5 217 aa7.89□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms