RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Cd274Q9EP73 290 aa20.9■□□□□ 0.94
Vti1b-201ENSMUST00000055262 Gm10436L7N1Y3 520 aa20.89■□□□□ 0.94
Vti1b-201ENSMUST00000055262 Cops5O35864 334 aa20.89■□□□□ 0.94
Vti1b-201ENSMUST00000055262 Pcif1P59114 706 aa20.89■□□□□ 0.94
Vti1b-201ENSMUST00000055262 Kcnj11Q61743 390 aa20.89■□□□□ 0.94
Vti1b-201ENSMUST00000055262 Cnnm4Q69ZF7 771 aa20.89■□□□□ 0.94
Vti1b-201ENSMUST00000055262 Tmem132dQ76HP3 1097 aa20.89■□□□□ 0.94
Vti1b-201ENSMUST00000055262 Lrch3Q8BVU0 778 aa20.89■□□□□ 0.94
Vti1b-201ENSMUST00000055262 Dhx32Q8BZS9 744 aa20.89■□□□□ 0.94
Vti1b-201ENSMUST00000055262 CrygnQ8VHL5 183 aa20.89■□□□□ 0.94
Vti1b-201ENSMUST00000055262 Stk38Q91VJ4 465 aa20.89■□□□□ 0.94
Vti1b-201ENSMUST00000055262 GneQ91WG8 722 aaKnown RBP20.89■□□□□ 0.94
Vti1b-201ENSMUST00000055262 Dnajc19Q9CQV7 116 aa20.89■□□□□ 0.94
Vti1b-201ENSMUST00000055262 Gpd2Q64521 727 aa20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Btbd7Q8CFE5 1130 aa20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Hdhd5Q91WM2 419 aa20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Ccer1Q9CQL2 403 aa20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Col4a3bpQ9EQG9 624 aa20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Kcnh7Q9ER47 1195 aa20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Sertad1Q9JL10 236 aa20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Hic2Q9JLZ6 619 aaKnown RBP20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Vav3Q9R0C8 847 aa20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 TroapB7ZNG4 668 aa20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Slc39a2G3X943 309 aa20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Esr2O08537 530 aa20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Phka1P18826 1241 aa20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Cdh15P33146 784 aa20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Gtf2f1Q3THK3 508 aaKnown RBP20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Ptpn18Q61152 453 aa20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Vmn1r191Q8K4D0 298 aa20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Nxf1Q99JX7 618 aaKnown RBP20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Krt23Q99PS0 422 aa20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Rbp7Q9EPC5 134 aa20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 FibpQ9JI19 357 aa20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Igbp1bQ9QZ29 343 aa20.88■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Mia3Q8BI84 1930 aa20.87■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Cspp1B2RX88 1205 aa20.87■□□□□ 0.93
Vti1b-201ENSMUST00000055262 ArP19091 899 aa20.87■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Sptlc2P97363 560 aaKnown RBP20.87■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Rnf207Q3V3A7 635 aa20.87■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Fam189a2Q4FZH1 290 aa20.87■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Kcnk18Q6VV64 394 aa20.87■□□□□ 0.93
Vti1b-201ENSMUST00000055262 IqcgQ80W32 419 aa20.87■□□□□ 0.93
Vti1b-201ENSMUST00000055262 CnstQ8CBC4 711 aa20.87■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Pkp2Q9CQ73 795 aaKnown RBP20.87■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Wdr64Q9D565 1086 aa20.87■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Limd1Q9QXD8 668 aa20.87■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Gm8882E9Q7E4 283 aa20.86■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Gm21969J3QJZ1 289 aa20.86■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Kif3aP28741 701 aa20.86■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Nr5a1P33242 462 aa20.86■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Lrrfip1Q3UZ39 729 aaKnown RBP20.86■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Usp28Q5I043 1051 aa20.86■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Grik5Q61626 979 aa20.86■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Gpc2Q8BKV1 579 aa20.86■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Mettl5Q8K1A0 209 aa20.86■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Ddx41Q91VN6 622 aaKnown RBP20.86■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Saal1Q9D2C2 474 aa20.86■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Alg13Q9D8C3 1166 aaKnown RBP20.86■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Ccdc112A0AUP1 442 aa20.85■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Dhtkd1A2ATU0 921 aa20.85■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Cpb1B2RS76 415 aa20.85■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Mroh8E9PYI4 1049 aa20.85■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Olfr67F8VPJ8 320 aa20.85■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Samd11Q1RNF8 542 aa20.85■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Nlrp2Q4PLS0 1046 aaKnown RBP20.85■□□□□ 0.93
Vti1b-201ENSMUST00000055262 NkrfQ8BY02 690 aaKnown RBP20.85■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Ca9Q8VHB5 437 aa20.85■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Mipol1Q9D9F8 279 aa20.85■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Ftsj3Q9DBE9 838 aaKnown RBP20.85■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Cdc42ep5Q9Z0X0 150 aa20.85■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Smchd1Q6P5D8 2007 aaKnown RBP20.85■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Ccdc78D3Z5T1 437 aa20.84■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Timm44O35857 452 aa20.84■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Trap1aP19473 224 aa20.84■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Lrrc36Q3V0M2 755 aa20.84■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Fscn1Q61553 493 aa20.84■□□□□ 0.93
Vti1b-201ENSMUST00000055262 PicalmQ7M6Y3 660 aaKnown RBP20.84■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Samm50Q8BGH2 469 aa20.84■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Coa7Q921H9 231 aa20.84■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Tekt1Q9DAJ2 418 aa20.84■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Lmbr1Q9JIT0 490 aa20.84■□□□□ 0.93
Vti1b-201ENSMUST00000055262 GlrbP48168 496 aa20.83■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Rit2P70425 217 aa20.83■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Tp53i13Q5F267 385 aa20.83■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Phlda1Q62392 405 aa20.83■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Tfe3Q64092 572 aaKnown RBP20.83■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Tbc1d22bQ80VE5 505 aa20.83■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Lrrd1Q8C0R9 853 aa20.83■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Ddx39aQ8VDW0 427 aaKnown RBP20.83■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Gpr37l1Q99JG2 481 aa20.83■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Me2Q99KE1 589 aa20.83■□□□□ 0.93
Vti1b-201ENSMUST00000055262 Dnajc25A2ALW5 357 aa20.82■□□□□ 0.92
Vti1b-201ENSMUST00000055262 Tmem265E9Q8G3 109 aa20.82■□□□□ 0.92
Vti1b-201ENSMUST00000055262 Gm20503G3UZK1 150 aa20.82■□□□□ 0.92
Vti1b-201ENSMUST00000055262 Barx2O08686 283 aa20.82■□□□□ 0.92
Vti1b-201ENSMUST00000055262 Atp9aO70228 1047 aa20.82■□□□□ 0.92
Vti1b-201ENSMUST00000055262 Hoxc13P50207 328 aa20.82■□□□□ 0.92
Vti1b-201ENSMUST00000055262 C87499Q3UX49 493 aa20.82■□□□□ 0.92
Vti1b-201ENSMUST00000055262 Arhgap1Q5FWK3 439 aa20.82■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms