RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Slu7Q8BHJ9 585 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Ankk1Q8BZ25 745 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 NelfbQ8C4Y3 580 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 MyocdQ8VIM5 935 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Pcdha12Q91Y18 950 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Alpk1Q9CXB8 1231 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Cbx6Q9DBY5 414 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 PycardQ9EPB4 193 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Dctpp1Q9QY93 170 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Sorbs3Q9R1Z8 733 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Cntnap5cQ0V8T7 1305 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Arrdc4A0A0B4J1F4 415 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Rexo5D3YW29 759 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Gm4307E9PZY4 289 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Gm4312K9J7E2 289 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 HunkO88866 714 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Krt18P05784 423 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Syt2P46097 422 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Pla2g6P97819 807 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Foxn3Q499D0 457 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Ankrd40Q5SUE8 363 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Foxd1Q61345 456 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Sestd1Q80UK0 696 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Camsap3Q80VC9 1252 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Rusc1Q8BG26 893 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Eps8l1Q8R5F8 716 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Pank2Q3U4S0 443 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Trpc6Q61143 930 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 IgflQ6B9Z0 140 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Jade2Q6ZQF7 829 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Mcph1Q7TT79 822 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Igdcc3Q8BQC3 813 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Setdb2Q8C267 713 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Fam83aQ8K2P2 436 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Taf6lQ8R2K4 616 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Thap2Q9D305 217 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Lrp2bpQ9D4C6 346 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 GsdmeQ9Z2D3 512 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Btbd19S4R1I0 287 aa9.71□□□□□ -0.85
Trim39-201ENSMUST00000042717 Rexo1Q7TT28 1213 aa9.71□□□□□ -0.86
Trim39-201ENSMUST00000042717 Hsdl1Q8BTX9 330 aa9.71□□□□□ -0.86
Trim39-201ENSMUST00000042717 Ddx39aQ8VDW0 427 aaKnown RBP9.71□□□□□ -0.86
Trim39-201ENSMUST00000042717 Elp3Q9CZX0 547 aa9.71□□□□□ -0.86
Trim39-201ENSMUST00000042717 Tbx18Q9EPZ6 613 aa9.71□□□□□ -0.86
Trim39-201ENSMUST00000042717 SetQ9EQU5 289 aaKnown RBP9.71□□□□□ -0.86
Trim39-201ENSMUST00000042717 Mkrn1Q9QXP6 481 aa9.71□□□□□ -0.86
Trim39-201ENSMUST00000042717 Lypla2Q9WTL7 231 aa9.71□□□□□ -0.86
Trim39-201ENSMUST00000042717 AW822073A0A0N4SUK1 652 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Gm11549A0A286YD83 63 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Arhgap6O54834 987 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Prom1O54990 867 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Pak1O88643 545 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Kcna3P16390 528 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Hmgcs2P54869 508 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Nol4P60954 483 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Tmem63bQ3TWI9 832 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Herc4Q6PAV2 1057 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 March6Q6ZQ89 909 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Pgm5Q8BZF8 567 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Enox2Q8R0Z2 598 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Ushbp1Q8R370 680 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 CrygnQ8VHL5 183 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Kdm4bQ91VY5 1086 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Dock2Q8C3J5 1828 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Zmynd8A2A484 1235 aaKnown RBP9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Gm973E9Q295 1059 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 FlgP11088 336 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Lamp1P11438 406 aaKnown RBP9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Abcb4P21440 1276 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Adamts10P58459 1104 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Stim1P70302 685 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Mier3Q3UHF3 551 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Csgalnact2Q8C1F4 542 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Klhl30Q8C3F7 581 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Ccdc113Q8C5T8 377 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Exoc1Q8R3S6 894 aa9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 RnpepQ8VCT3 650 aaKnown RBP9.7□□□□□ -0.86
Trim39-201ENSMUST00000042717 Celf5D3Z4T1 395 aaKnown RBP9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 AunipE9Q6Z5 340 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Gm10436L7N1Y3 520 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Magea8O89012 320 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Cacna2d4Q5RJF7 1116 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Ift88Q61371 824 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Sycp1Q62209 993 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Fkbp3Q62446 224 aaKnown RBP9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Naa35Q6PHQ8 725 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Arid5bQ8BM75 1188 aaKnown RBP9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Cog5Q8C0L8 829 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Nemp2Q8CB65 421 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Dlk2Q8K1E3 382 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Dqx1Q924H9 718 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Pcdh11xF6ZNL5 1338 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Cul4bA2A432 970 aaKnown RBP9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Krt36B1AQ75 473 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 PgfP49764 158 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Etv6P97360 485 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Btg1-ps1Q3V0S2 161 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Btg1-ps2Q3V0X0 161 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Kdm1aQ6ZQ88 853 aa9.69□□□□□ -0.86
Trim39-201ENSMUST00000042717 Tmem192Q9CXT7 266 aa9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms