RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Acsbg2Q2XU92 667 aa13.23□□□□□ -0.29
Rfx1-201ENSMUST00000005600 2310002L09RikQ9D7L5 217 aa13.23□□□□□ -0.29
Rfx1-201ENSMUST00000005600 NesQ6P5H2 1864 aaKnown RBP13.23□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Zscan18E9PUD6 809 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Ccdc33Q3ULW6 985 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Ehbp1Q69ZW3 1231 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Bola2Q8BGS2 86 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Psmd2Q8VDM4 908 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Actn2Q9JI91 894 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Pnma5Q5DTT8 618 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Anks6Q6GQX6 883 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Ankrd23Q812A3 306 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Ccdc87Q8CDL9 855 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 4931423N10RikQ9D4J9 382 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Capn9Q9D805 690 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Adarb2Q9JI20 745 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 MefvQ9JJ26 767 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Ccnt1Q9QWV9 724 aaKnown RBP13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 GgcxQ9QYC7 757 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Lig3P97386 1015 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Ccdc189Q6NZQ0 333 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Naa35Q6PHQ8 725 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 RalylQ8BTF8 293 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Ube2sQ921J4 223 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Lrrc57Q9D1G5 239 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Erp44Q9D1Q6 406 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Krt34Q9D646 392 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Epb41l3Q9WV92 929 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Adgrf5G5E8Q8 1348 aa13.22□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Magea10A2AMW4 325 aa13.21□□□□□ -0.29
Rfx1-201ENSMUST00000005600 D1Pas1P16381 660 aa13.21□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Pstpip1P97814 415 aa13.21□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Fhdc1Q3ULZ2 1149 aa13.21□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Haus1Q8BHX1 278 aa13.21□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Kbtbd4Q8R179 534 aa13.21□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Ctage5Q8R311 779 aa13.21□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Calml4Q91WQ9 153 aa13.21□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Chrm1P12657 460 aa13.21□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Tmed8Q3UHI4 326 aa13.21□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Drd5Q8BLD9 478 aa13.21□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Arhgef19Q8BWA8 802 aa13.21□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Lsm14bQ8CGC4 385 aaKnown RBP13.21□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Lmbrd1Q8K0B2 537 aa13.21□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Znrd1-asQ8R0E5 213 aa13.21□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Olfr805Q8VFI4 319 aa13.21□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Apol10bG3X9K7 334 aa13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Clcn6O35454 870 aa13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Nr1i3O35627 358 aa13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Npy5rO70342 466 aa13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Ctnna1P26231 906 aaKnown RBP13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Nf2P46662 596 aa13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 PltpP55065 493 aa13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 SlmapQ3URD3 845 aa13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 PRAG1Q571I4 1179 aa13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Herc4Q6PAV2 1057 aa13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Krt9Q6RHW0 743 aa13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Tcp10aQ80W76 438 aa13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Igdcc3Q8BQC3 813 aa13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Acot3Q9QYR7 432 aa13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Hps5P59438 1126 aa13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Atp1b3P97370 278 aa13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Gcnt1Q09324 428 aa13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Galnt17Q7TT15 598 aa13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 3830403N18RikQ9D6C3 208 aa13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 CoasyQ9DBL7 563 aa13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Nap1l5Q9JJF0 156 aa13.21□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Speer4f2E9Q366 295 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Ncf2O70145 525 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Fgd3O88842 733 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Rpusd2Q149F1 553 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Tmem179Q8BHH9 233 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 HlfQ8BW74 295 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Iws1Q8C1D8 766 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Lrrc45Q8CIM1 670 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Rbm5Q91YE7 815 aaKnown RBP13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Fam173bQ9D1Z3 247 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Saal1Q9D2C2 474 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Trmt112Q9DCG9 125 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Tjp2Q9Z0U1 1167 aaKnown RBP13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Zfp213E9QAW0 468 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Kcnma1Q08460 1209 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Arhgap44Q5SSM3 814 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Efcab14Q8BGQ6 484 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Tbc1d23Q8K0F1 684 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Cdk8Q8R3L8 464 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Dhx58Q99J87 678 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Znf287Q9EQB9 759 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Sertad1Q9JL10 236 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Nlrp5Q9R1M5 1163 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Nup98Q6PFD9 1816 aaKnown RBP13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Btbd18A0A0A6YY25 723 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Map7d1A2AJI0 846 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Spout1Q3UHX9 385 aaKnown RBP13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Gm5935Q497S0 212 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Pacsin1Q61644 441 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Grm4Q68EF4 912 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Ttc22Q8C159 568 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Tut1Q8R3F9 869 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Mis12Q9CY25 206 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Tex21Q9R0U9 575 aa13.2□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms