RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Usp27Q8CEG8 438 aa20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Olfr805Q8VFI4 319 aa20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Xrcc4Q924T3 326 aa20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 1700020D05RikQ99PB1 294 aa20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Sh2b2Q9JID9 621 aa20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Tex21Q9R0U9 575 aa20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Odf2A3KGV1 830 aaKnown RBP20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 MtrA6H5Y3 1253 aa20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Orc4O88708 433 aa20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 SlmapQ3URD3 845 aa20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Ces1eQ64176 562 aa20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 GanQ8CA72 597 aa20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 RnmtQ9D0L8 465 aaKnown RBP20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 4931423N10RikQ9D4J9 382 aa20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Ccdc89Q9DA73 370 aa20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 SyncQ9EPM5 470 aa20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Fdx1P46656 188 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 GscQ02591 256 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Nsun7Q14AW5 724 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Gas8Q60779 478 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Sh3gl2Q62420 352 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Tm4sf1Q64302 202 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Usp17leQ7M764 540 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Spag7Q7TNE3 227 aaKnown RBP20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 F13a1Q8BH61 732 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Dennd2aQ8C4S8 1000 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Lpin2Q99PI5 893 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Ccdc43Q9CR29 222 aaKnown RBP20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Nol7Q9D7Z3 254 aaKnown RBP20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 CoasyQ9DBL7 563 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Mkrn1Q9QXP6 481 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 AdnpQ9Z103 1108 aaKnown RBP20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Zfp646Q6NV66 1788 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Ppfia4B8QI36 1187 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Vmn2r79E9Q067 851 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Il27raO70394 623 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Atp6v0a2P15920 856 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Ranbp1P34022 203 aaKnown RBP20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Gad1P48318 593 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Vgll3P85442 326 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Ppp1r7Q3UM45 361 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Scnn1aQ61180 699 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Ddx3xQ62167 662 aaKnown RBP20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Ccdc148Q6P5U8 527 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Spata2Q8K004 515 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Slc51aQ8R000 340 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Eps8l2Q99K30 729 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Kif17Q99PW8 1038 aa20.66■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Gm5737A0A140LI11 423 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Ces1aE9PYP1 563 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Gjb6P70689 261 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Sap30bpQ02614 308 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Klhdc9Q3USL1 350 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Sco1Q5SUC9 284 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 PnocQ64387 187 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 GartQ64737 1010 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Slc13a4Q8BZ82 625 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Ddx19bQ8BZY3 494 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Gpcpd1Q8C0L9 675 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Ces1Q8VCC2 565 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Gtf2iQ9ESZ8 998 aaKnown RBP20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 CenphQ9QYM8 241 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Prpf40aQ9R1C7 953 aaKnown RBP20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Dock2Q8C3J5 1828 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Apol10bG3X9K7 334 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Tal1P22091 329 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Cdc25aP48964 514 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Senp1P59110 640 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Glg1Q61543 1175 aaKnown RBP20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Exoc3Q6KAR6 755 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Mxd3Q80US8 206 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 H6pdQ8CFX1 789 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Cacnb1Q8R3Z5 597 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Spata17Q9D552 379 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Mzb1Q9D8I1 188 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Gdf11Q9Z1W4 405 aa20.65■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 4930523C07RikE9Q2T4 99 aa20.64■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Mcl1P97287 331 aa20.64■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 GnptabQ69ZN6 1235 aa20.64■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Best3Q6H1V1 669 aa20.64■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Mboat7Q8CHK3 473 aa20.64■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Sgms1Q8VCQ6 419 aa20.64■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Klra10Q9R1G6 266 aa20.64■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Trim10Q9WUH5 489 aa20.64■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Vcam1P29533 739 aa20.64■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Epb41l4aP52963 686 aa20.64■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Surf6P70279 355 aaKnown RBP20.64■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Rnf207Q3V3A7 635 aa20.64■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Kctd1Q5M956 257 aa20.64■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Krt14Q61781 484 aa20.64■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Ncapg2Q6DFV1 1138 aa20.64■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Pcdhb5Q91XZ5 792 aa20.64■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Smco2Q9DA21 347 aa20.64■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Mxra8Q9DBV4 442 aa20.64■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Vav3Q9R0C8 847 aa20.64■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 XlrP05531 208 aa20.63■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Agxt2Q3UEG6 513 aa20.63■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 Fam183bQ5NC57 135 aa20.63■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 PigsQ6PD26 555 aaKnown RBP20.63■□□□□ 0.89
Shkbp1-201ENSMUST00000003857 March6Q6ZQ89 909 aa20.63■□□□□ 0.89
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms