RNA–Protein interactions for RNA: YLR223C

IFH1, Transcript of Coactivator, regulates transcription of ribosomal protein (RP) genes, yeastyeast

Gene IFH1, Length 3,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IFH1YLR223C CTF3Q12748 733 aa1.29□□□□□ -2.2
IFH1YLR223C SUC2P00724 532 aa1.29□□□□□ -2.2
IFH1YLR223C ATP10P18496 279 aa1.29□□□□□ -2.2
IFH1YLR223C RPI1P23250 407 aaKnown RBP1.29□□□□□ -2.2
IFH1YLR223C PUT3P25502 979 aaPredicted RBP1.29□□□□□ -2.2
IFH1YLR223C YCR100CP25606 316 aa1.29□□□□□ -2.2
IFH1YLR223C IMP2'P32351 346 aa1.29□□□□□ -2.2
IFH1YLR223C SWE1P32944 819 aa1.29□□□□□ -2.2
IFH1YLR223C SAS3P34218 831 aa1.29□□□□□ -2.2
IFH1YLR223C MRPL4P36517 319 aa1.29□□□□□ -2.2
IFH1YLR223C PCA1P38360 1216 aa1.29□□□□□ -2.2
IFH1YLR223C DED81P38707 554 aaKnown RBP1.29□□□□□ -2.2
IFH1YLR223C HAT2P39984 401 aa1.29□□□□□ -2.2
IFH1YLR223C ESL1P40456 1118 aa1.29□□□□□ -2.2
IFH1YLR223C MET18P40469 1032 aa1.29□□□□□ -2.2
IFH1YLR223C MET28P40573 187 aa1.29□□□□□ -2.2
IFH1YLR223C GPD2P41911 440 aaKnown RBP1.29□□□□□ -2.2
IFH1YLR223C URB2P47108 1174 aa1.29□□□□□ -2.2
IFH1YLR223C ERP1Q05359 219 aaKnown RBP1.29□□□□□ -2.2
IFH1YLR223C RRG1Q12167 365 aaPredicted RBP1.29□□□□□ -2.2
IFH1YLR223C YLR278CQ05854 1341 aa1.28□□□□□ -2.2
IFH1YLR223C RHO2P06781 192 aa1.28□□□□□ -2.2
IFH1YLR223C APE2P32454 952 aaKnown RBP1.28□□□□□ -2.2
IFH1YLR223C SWH1P35845 1188 aa1.28□□□□□ -2.2
IFH1YLR223C SHE10P53075 577 aa1.28□□□□□ -2.2
IFH1YLR223C RPM2Q02773 1202 aa1.28□□□□□ -2.2
IFH1YLR223C GLC7P32598 312 aaKnown RBP1.28□□□□□ -2.2
IFH1YLR223C OTU2P38747 307 aaKnown RBP1.28□□□□□ -2.2
IFH1YLR223C SMF1P38925 575 aa1.28□□□□□ -2.2
IFH1YLR223C YIL067CP40514 678 aa1.28□□□□□ -2.2
IFH1YLR223C YDR387CQ04162 555 aa1.28□□□□□ -2.2
IFH1YLR223C YLR287CQ05881 355 aa1.28□□□□□ -2.2
IFH1YLR223C YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
IFH1YLR223C RTN2Q12443 393 aa1.28□□□□□ -2.2
IFH1YLR223C YCL021W-AQ96VH3 125 aa1.28□□□□□ -2.2
IFH1YLR223C YRF1-4O13559 1382 aa1.28□□□□□ -2.2
IFH1YLR223C SPS4P09937 338 aa1.28□□□□□ -2.21
IFH1YLR223C ATR1P13090 542 aa1.28□□□□□ -2.21
IFH1YLR223C CLB3P24870 427 aa1.28□□□□□ -2.21
IFH1YLR223C AVT5P38176 459 aa1.28□□□□□ -2.21
IFH1YLR223C VHC1P38329 1120 aa1.28□□□□□ -2.21
IFH1YLR223C FAU1P40099 211 aa1.28□□□□□ -2.21
IFH1YLR223C CAF40P53829 373 aa1.28□□□□□ -2.21
IFH1YLR223C KTR5P53966 522 aaPredicted RBP1.28□□□□□ -2.21
IFH1YLR223C YMR155WQ03795 547 aa1.28□□□□□ -2.21
IFH1YLR223C BNA5Q05979 453 aa1.28□□□□□ -2.21
IFH1YLR223C THP3Q12049 470 aaKnown RBP1.28□□□□□ -2.21
IFH1YLR223C SPA2P23201 1466 aaKnown RBP1.28□□□□□ -2.21
IFH1YLR223C REC107P21651 314 aa1.27□□□□□ -2.21
IFH1YLR223C YIM1P28625 365 aa1.27□□□□□ -2.21
IFH1YLR223C LAM5P43560 674 aa1.27□□□□□ -2.21
IFH1YLR223C PHB2P50085 310 aa1.27□□□□□ -2.21
IFH1YLR223C COS10P52924 374 aa1.27□□□□□ -2.21
IFH1YLR223C NCS2P53923 493 aaPredicted RBP1.27□□□□□ -2.21
IFH1YLR223C HCR1Q05775 265 aaKnown RBP1.27□□□□□ -2.21
IFH1YLR223C IMH1Q06704 911 aaKnown RBP1.27□□□□□ -2.21
IFH1YLR223C REX4Q08237 289 aa1.27□□□□□ -2.21
IFH1YLR223C CHS1P08004 1131 aa1.27□□□□□ -2.21
IFH1YLR223C HCS1P34243 683 aa1.27□□□□□ -2.21
IFH1YLR223C ARA1P38115 344 aa1.27□□□□□ -2.21
IFH1YLR223C MUM2P38236 366 aa1.27□□□□□ -2.21
IFH1YLR223C UTP9P38882 575 aaKnown RBP1.27□□□□□ -2.21
IFH1YLR223C SSU1P41930 458 aa1.27□□□□□ -2.21
IFH1YLR223C GIR2Q03768 265 aaPredicted RBP1.27□□□□□ -2.21
IFH1YLR223C YOL159C-AQ3E769 90 aa1.27□□□□□ -2.21
IFH1YLR223C YBR056W-AI2HB52 66 aa1.27□□□□□ -2.21
IFH1YLR223C ROX1P25042 368 aa1.27□□□□□ -2.21
IFH1YLR223C HXT3P32466 567 aaKnown RBP1.27□□□□□ -2.21
IFH1YLR223C EBP2P36049 427 aaKnown RBP1.27□□□□□ -2.21
IFH1YLR223C RIB5P38145 238 aa1.27□□□□□ -2.21
IFH1YLR223C IRC6P43615 237 aa1.27□□□□□ -2.21
IFH1YLR223C PNG1Q02890 363 aa1.27□□□□□ -2.21
IFH1YLR223C HNT3Q08702 217 aa1.27□□□□□ -2.21
IFH1YLR223C SPO7P18410 259 aa1.26□□□□□ -2.21
IFH1YLR223C SLY1P22213 666 aa1.26□□□□□ -2.21
IFH1YLR223C CRM1P30822 1084 aaKnown RBP1.26□□□□□ -2.21
IFH1YLR223C LOS1P33418 1100 aaPredicted RBP1.26□□□□□ -2.21
IFH1YLR223C YBL059WP34224 193 aa1.26□□□□□ -2.21
IFH1YLR223C OST1P41543 476 aaKnown RBP1.26□□□□□ -2.21
IFH1YLR223C RPS0BP46654 252 aaKnown RBP1.26□□□□□ -2.21
IFH1YLR223C HMS2P47175 358 aa1.26□□□□□ -2.21
IFH1YLR223C YIP1P53039 248 aa1.26□□□□□ -2.21
IFH1YLR223C YGL138CP53122 345 aa1.26□□□□□ -2.21
IFH1YLR223C OGG1P53397 376 aaPredicted RBP1.26□□□□□ -2.21
IFH1YLR223C MSO1P53604 210 aaKnown RBP1.26□□□□□ -2.21
IFH1YLR223C SOV1Q04748 898 aa1.26□□□□□ -2.21
IFH1YLR223C PBA1Q05778 276 aa1.26□□□□□ -2.21
IFH1YLR223C YOR387CQ08910 206 aa1.26□□□□□ -2.21
IFH1YLR223C KEL3Q08979 651 aaPredicted RBP1.26□□□□□ -2.21
IFH1YLR223C HHF1P02309 103 aaKnown RBP1.26□□□□□ -2.21
IFH1YLR223C CLN1P20437 546 aa1.26□□□□□ -2.21
IFH1YLR223C CPR4P25334 318 aa1.26□□□□□ -2.21
IFH1YLR223C MFT1P33441 392 aaKnown RBP1.26□□□□□ -2.21
IFH1YLR223C PAD1P33751 242 aaKnown RBP RIP-Chip data1.26□□□□□ -2.21not detected
IFH1YLR223C BYE1P36106 594 aa1.26□□□□□ -2.21
IFH1YLR223C NTC20P38302 140 aaPredicted RBP1.26□□□□□ -2.21
IFH1YLR223C TFG2P41896 400 aaPredicted RBP1.26□□□□□ -2.21
IFH1YLR223C IDP2P41939 412 aa1.26□□□□□ -2.21
IFH1YLR223C YPI1P43587 155 aa1.26□□□□□ -2.21
IFH1YLR223C JJJ1P53863 590 aa1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms