RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 UBXN2AP68543 259 aa14.01□□□□□ -0.17
LINC00339-213ENST00000642137 MRPS9P82933 396 aaKnown RBP14.01□□□□□ -0.17
LINC00339-213ENST00000642137 PRKCZQ05513 592 aa14.01□□□□□ -0.17
LINC00339-213ENST00000642137 PDE4DQ08499 809 aa14.01□□□□□ -0.17
LINC00339-213ENST00000642137 ORC2Q13416 577 aaPredicted RBP14.01□□□□□ -0.17
LINC00339-213ENST00000642137 LETM2Q2VYF4 491 aa14.01□□□□□ -0.17
LINC00339-213ENST00000642137 TTC38Q5R3I4 469 aa14.01□□□□□ -0.17
LINC00339-213ENST00000642137 OLFML2BQ68BL8 750 aa14.01□□□□□ -0.17
LINC00339-213ENST00000642137 MBOAT7Q96N66 472 aa14.01□□□□□ -0.17
LINC00339-213ENST00000642137 ZNF396Q96N95 335 aaPredicted RBP14.01□□□□□ -0.17
LINC00339-213ENST00000642137 MXRA8Q9BRK3 442 aa14.01□□□□□ -0.17
LINC00339-213ENST00000642137 TINF2Q9BSI4 451 aa14.01□□□□□ -0.17
LINC00339-213ENST00000642137 UBIAD1Q9Y5Z9 338 aa14.01□□□□□ -0.17
LINC00339-213ENST00000642137 ZSWIM8A7E2V4 1837 aa14.01□□□□□ -0.17
LINC00339-213ENST00000642137 CCNT1O60563 726 aaKnown RBP14□□□□□ -0.17
LINC00339-213ENST00000642137 ATP2B1P20020 1258 aa14□□□□□ -0.17
LINC00339-213ENST00000642137 Q4G0T1 1027 aa14□□□□□ -0.17
LINC00339-213ENST00000642137 CEP55Q53EZ4 464 aa14□□□□□ -0.17
LINC00339-213ENST00000642137 FAM173BQ6P4H8 233 aa14□□□□□ -0.17
LINC00339-213ENST00000642137 OTOP1Q7RTM1 612 aa14□□□□□ -0.17
LINC00339-213ENST00000642137 NIPA1Q7RTP0 329 aa14□□□□□ -0.17
LINC00339-213ENST00000642137 IL31RAQ8NI17 732 aa14□□□□□ -0.17
LINC00339-213ENST00000642137 JADE2Q9NQC1 790 aa14□□□□□ -0.17
LINC00339-213ENST00000642137 EIF4ENIF1Q9NRA8 985 aaKnown RBP14□□□□□ -0.17
LINC00339-213ENST00000642137 RTEL1Q9NZ71 1219 aa14□□□□□ -0.17
LINC00339-213ENST00000642137 MEIS1O00470 390 aa13.99□□□□□ -0.17
LINC00339-213ENST00000642137 SNAI1O95863 264 aaPredicted RBP13.99□□□□□ -0.17
LINC00339-213ENST00000642137 ZNF174Q15697 407 aa13.99□□□□□ -0.17
LINC00339-213ENST00000642137 ARMCX2Q7L311 632 aa13.99□□□□□ -0.17
LINC00339-213ENST00000642137 NLRX1Q86UT6 975 aa13.99□□□□□ -0.17
LINC00339-213ENST00000642137 PXYLP1Q8TE99 480 aa13.99□□□□□ -0.17
LINC00339-213ENST00000642137 GPRASP2Q96D09 838 aa13.99□□□□□ -0.17
LINC00339-213ENST00000642137 ABHD16BQ9H3Z7 469 aa13.99□□□□□ -0.17
LINC00339-213ENST00000642137 FLRT1Q9NZU1 646 aa13.99□□□□□ -0.17
LINC00339-213ENST00000642137 CFAP45Q9UL16 551 aa13.99□□□□□ -0.17
LINC00339-213ENST00000642137 TRIM17Q9Y577 477 aa13.99□□□□□ -0.17
LINC00339-213ENST00000642137 PCDHB6Q9Y5E3 794 aa13.99□□□□□ -0.17
LINC00339-213ENST00000642137 CASP8AP2Q9UKL3 1982 aa13.99□□□□□ -0.17
LINC00339-213ENST00000642137 MYH15Q9Y2K3 1946 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 IGLV3-22A0A075B6J6 115 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 FAM86B1E9PN63 330 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 WNT7AO00755 349 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 BMP15O95972 392 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 FAM86B2P0C5J1 330 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 ITGB5P18084 799 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 ICAM3P32942 547 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 LBX1P52954 281 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 CCL14Q16627 93 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 GNPTABQ3T906 1256 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 ANO1Q5XXA6 986 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 KCNV1Q6PIU1 500 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 PLA2G4DQ86XP0 818 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 RAET1EQ8TD07 263 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 CDHR1Q96JP9 859 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 INPP4AQ96PE3 977 aaPredicted RBP13.98□□□□□ -0.17
LINC00339-213ENST00000642137 VTA1Q9NP79 307 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 POLR3EQ9NVU0 708 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.98□□□□□ -0.17
LINC00339-213ENST00000642137 TFIP11Q9UBB9 837 aaKnown RBP13.98□□□□□ -0.17
LINC00339-213ENST00000642137 DDX25Q9UHL0 483 aaKnown RBP13.98□□□□□ -0.17
LINC00339-213ENST00000642137 NRBP1Q9UHY1 535 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 CEP131Q9UPN4 1083 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 KIAA1217Q5T5P2 1943 aa13.98□□□□□ -0.17
LINC00339-213ENST00000642137 MCM3APO60318 1980 aa13.97□□□□□ -0.17
LINC00339-213ENST00000642137 RBM47A0AV96 593 aaKnown RBP13.97□□□□□ -0.17
LINC00339-213ENST00000642137 SPATA31C2B4DYI2 1134 aa13.97□□□□□ -0.17
LINC00339-213ENST00000642137 TBX3O15119 743 aa13.97□□□□□ -0.17
LINC00339-213ENST00000642137 ADCY3O60266 1144 aa13.97□□□□□ -0.17
LINC00339-213ENST00000642137 RGS20O76081 388 aa13.97□□□□□ -0.17
LINC00339-213ENST00000642137 TDP2O95551 362 aa13.97□□□□□ -0.17
LINC00339-213ENST00000642137 TGFB3P10600 412 aa13.97□□□□□ -0.17
LINC00339-213ENST00000642137 MCM7P33993 719 aa13.97□□□□□ -0.17
LINC00339-213ENST00000642137 KRT85P78386 507 aa13.97□□□□□ -0.17
LINC00339-213ENST00000642137 SETQ01105 290 aaPredicted RBP13.97□□□□□ -0.17
LINC00339-213ENST00000642137 DNM1Q05193 864 aaKnown RBP13.97□□□□□ -0.17
LINC00339-213ENST00000642137 SF3A1Q15459 793 aaKnown RBP13.97□□□□□ -0.17
LINC00339-213ENST00000642137 PRR16Q569H4 304 aa13.97□□□□□ -0.17
LINC00339-213ENST00000642137 MFSD14CQ5VZR4 134 aa13.97□□□□□ -0.17
LINC00339-213ENST00000642137 C4orf32Q8N8J7 132 aa13.97□□□□□ -0.17
LINC00339-213ENST00000642137 CYP2W1Q8TAV3 490 aa13.97□□□□□ -0.17
LINC00339-213ENST00000642137 TNPO1Q92973 898 aaKnown RBP13.97□□□□□ -0.17
LINC00339-213ENST00000642137 ZFP91Q96JP5 570 aaPredicted RBP13.97□□□□□ -0.17
LINC00339-213ENST00000642137 USP28Q96RU2 1077 aa13.97□□□□□ -0.17
LINC00339-213ENST00000642137 WDR11Q9BZH6 1224 aa13.97□□□□□ -0.17
LINC00339-213ENST00000642137 PTPN22Q9Y2R2 807 aa13.97□□□□□ -0.17
LINC00339-213ENST00000642137 CLIC4Q9Y696 253 aa13.97□□□□□ -0.17
LINC00339-213ENST00000642137 MORC2Q9Y6X9 1032 aaPredicted RBP13.97□□□□□ -0.17
LINC00339-213ENST00000642137 TCHHQ07283 1943 aa13.97□□□□□ -0.17
LINC00339-213ENST00000642137 LAD1O00515 517 aa13.96□□□□□ -0.17
LINC00339-213ENST00000642137 FIBPO43427 364 aa13.96□□□□□ -0.17
LINC00339-213ENST00000642137 BAG4O95429 457 aaKnown RBP13.96□□□□□ -0.17
LINC00339-213ENST00000642137 ARP10275 920 aa13.96□□□□□ -0.17
LINC00339-213ENST00000642137 NASPP49321 788 aaPredicted RBP13.96□□□□□ -0.17
LINC00339-213ENST00000642137 ACVR2BQ13705 512 aa13.96□□□□□ -0.17
LINC00339-213ENST00000642137 NBR1Q14596 966 aa13.96□□□□□ -0.17
LINC00339-213ENST00000642137 SLC39A14Q15043 492 aa13.96□□□□□ -0.17
LINC00339-213ENST00000642137 PTPAQ15257 358 aa13.96□□□□□ -0.17
LINC00339-213ENST00000642137 FOXD4L6Q3SYB3 417 aaPredicted RBP13.96□□□□□ -0.17
LINC00339-213ENST00000642137 IQSEC1Q6DN90 963 aa13.96□□□□□ -0.17
LINC00339-213ENST00000642137 TAPT1Q6NXT6 567 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms