RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 COBLO75128 1261 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 FLOT1O75955 427 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 DEXIO95424 95 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 SMARCA1P28370 1054 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 ACLYP53396 1101 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 FOSBP53539 338 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 TFF2Q03403 129 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 PPP2R2DQ66LE6 453 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 BTNL9Q6UXG8 535 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 ZNF365Q70YC5 407 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 FAM160B2Q86V87 743 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 ADGRF4Q8IZF3 695 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 KIFC2Q96AC6 838 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 RRP36Q96EU6 259 aaKnown RBP10.82□□□□□ -0.68
PHGDH-228ENST00000641847 SNX27Q96L92 541 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 SLF1Q9BQI6 1058 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 NKX2-4Q9H2Z4 354 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 RIOX1Q9H6W3 641 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 SPC25Q9HBM1 224 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 VAT1LQ9HCJ6 419 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 FBXO28Q9NVF7 368 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 SEC63Q9UGP8 760 aaKnown RBP10.82□□□□□ -0.68
PHGDH-228ENST00000641847 KIF3AQ9Y496 699 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 V9GY48 417 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-228ENST00000641847 PLA2G6O60733 806 aa10.81□□□□□ -0.68
PHGDH-228ENST00000641847 FGBP02675 491 aa10.81□□□□□ -0.68
PHGDH-228ENST00000641847 CSF2RAP15509 400 aa10.81□□□□□ -0.68
PHGDH-228ENST00000641847 KCNQ1P51787 676 aa10.81□□□□□ -0.68
PHGDH-228ENST00000641847 CDC37Q16543 378 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-228ENST00000641847 PFKFB3Q16875 520 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-228ENST00000641847 RASIP1Q5U651 963 aa10.81□□□□□ -0.68
PHGDH-228ENST00000641847 SAMD1Q6SPF0 538 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-228ENST00000641847 CHURC1Q8WUH1 139 aa10.81□□□□□ -0.68
PHGDH-228ENST00000641847 WASF1Q92558 559 aa10.81□□□□□ -0.68
PHGDH-228ENST00000641847 AIFM3Q96NN9 605 aa10.81□□□□□ -0.68
PHGDH-228ENST00000641847 PIGSQ96S52 555 aa10.81□□□□□ -0.68
PHGDH-228ENST00000641847 TINF2Q9BSI4 451 aa10.81□□□□□ -0.68
PHGDH-228ENST00000641847 ALG1Q9BT22 464 aa10.81□□□□□ -0.68
PHGDH-228ENST00000641847 JMJD4Q9H9V9 463 aa10.81□□□□□ -0.68
PHGDH-228ENST00000641847 TBX21Q9UL17 535 aa10.81□□□□□ -0.68
PHGDH-228ENST00000641847 PPP1R9AQ9ULJ8 1098 aa10.81□□□□□ -0.68
PHGDH-228ENST00000641847 PRR12Q9ULL5 1215 aa10.81□□□□□ -0.68
PHGDH-228ENST00000641847 ELP1O95163 1332 aa10.81□□□□□ -0.68
PHGDH-228ENST00000641847 SLC25A27O95847 323 aa10.8□□□□□ -0.68
PHGDH-228ENST00000641847 ACRP10323 421 aa10.8□□□□□ -0.68
PHGDH-228ENST00000641847 SCG2P13521 617 aa10.8□□□□□ -0.68
PHGDH-228ENST00000641847 DDIT3P35638 169 aa10.8□□□□□ -0.68
PHGDH-228ENST00000641847 KCTD2Q14681 263 aa10.8□□□□□ -0.68
PHGDH-228ENST00000641847 PKN1Q16512 942 aa10.8□□□□□ -0.68
PHGDH-228ENST00000641847 QRICH1Q2TAL8 776 aa10.8□□□□□ -0.68
PHGDH-228ENST00000641847 C16orf59Q7L2K0 433 aa10.8□□□□□ -0.68
PHGDH-228ENST00000641847 HEATR3Q7Z4Q2 680 aa10.8□□□□□ -0.68
PHGDH-228ENST00000641847 PCSK9Q8NBP7 692 aaKnown RBP10.8□□□□□ -0.68
PHGDH-228ENST00000641847 GPKOWQ92917 476 aaPredicted RBP eCLIP10.8□□□□□ -0.68
PHGDH-228ENST00000641847 MTMR8Q96EF0 704 aa10.8□□□□□ -0.68
PHGDH-228ENST00000641847 MMP19Q99542 508 aa10.8□□□□□ -0.68
PHGDH-228ENST00000641847 RANBP17Q9H2T7 1088 aaKnown RBP10.8□□□□□ -0.68
PHGDH-228ENST00000641847 IL23AQ9NPF7 189 aa10.8□□□□□ -0.68
PHGDH-228ENST00000641847 BAZ2BQ9UIF8 2168 aaKnown RBP10.8□□□□□ -0.68
PHGDH-228ENST00000641847 PNMA6FA0A0J9YX94 578 aa10.79□□□□□ -0.68
PHGDH-228ENST00000641847 H3BQV1 296 aa10.79□□□□□ -0.68
PHGDH-228ENST00000641847 ZBTB5O15062 677 aa10.79□□□□□ -0.68
PHGDH-228ENST00000641847 PDCP20941 246 aa10.79□□□□□ -0.68
PHGDH-228ENST00000641847 SNAP25P60880 206 aa10.79□□□□□ -0.68
PHGDH-228ENST00000641847 TRIM29Q14134 588 aa10.79□□□□□ -0.68
PHGDH-228ENST00000641847 CSPP1Q1MSJ5 1256 aa10.79□□□□□ -0.68
PHGDH-228ENST00000641847 LARP1BQ659C4 914 aaKnown RBP10.79□□□□□ -0.68
PHGDH-228ENST00000641847 WWC2Q6AWC2 1192 aa10.79□□□□□ -0.68
PHGDH-228ENST00000641847 PRPF38AQ8NAV1 312 aaKnown RBP10.79□□□□□ -0.68
PHGDH-228ENST00000641847 HLA-CQ95604 372 aa10.79□□□□□ -0.68
PHGDH-228ENST00000641847 ATG4CQ96DT6 458 aa10.79□□□□□ -0.68
PHGDH-228ENST00000641847 C8orf76Q96K31 380 aa10.79□□□□□ -0.68
PHGDH-228ENST00000641847 PPP1R12CQ9BZL4 782 aa10.79□□□□□ -0.68
PHGDH-228ENST00000641847 VPS54Q9P1Q0 977 aa10.79□□□□□ -0.68
PHGDH-228ENST00000641847 FAM184BQ9ULE4 1060 aa10.79□□□□□ -0.68
PHGDH-228ENST00000641847 DIS3Q9Y2L1 958 aaKnown RBP10.79□□□□□ -0.68
PHGDH-228ENST00000641847 SLC4A7Q9Y6M7 1214 aa10.79□□□□□ -0.68
PHGDH-228ENST00000641847 COL11A1P12107 1806 aaPredicted RBP10.79□□□□□ -0.68
PHGDH-228ENST00000641847 A0A0U1RQG5 324 aaPredicted RBP10.78□□□□□ -0.68
PHGDH-228ENST00000641847 VPS37CA5D8V6 355 aaPredicted RBP10.78□□□□□ -0.68
PHGDH-228ENST00000641847 hCG_1984214I3L0E3 225 aa10.78□□□□□ -0.68
PHGDH-228ENST00000641847 STXBP3O00186 592 aa10.78□□□□□ -0.68
PHGDH-228ENST00000641847 STX6O43752 255 aa10.78□□□□□ -0.68
PHGDH-228ENST00000641847 PPP1R11O60927 126 aaPredicted RBP10.78□□□□□ -0.68
PHGDH-228ENST00000641847 TAL1P17542 331 aaPredicted RBP10.78□□□□□ -0.68
PHGDH-228ENST00000641847 XBP1P17861 261 aa10.78□□□□□ -0.68
PHGDH-228ENST00000641847 SYT1P21579 422 aa10.78□□□□□ -0.68
PHGDH-228ENST00000641847 DSG3P32926 999 aa10.78□□□□□ -0.68
PHGDH-228ENST00000641847 COPB2P35606 906 aa10.78□□□□□ -0.68
PHGDH-228ENST00000641847 MRE11P49959 708 aa10.78□□□□□ -0.68
PHGDH-228ENST00000641847 GUCY1B3Q02153 619 aa10.78□□□□□ -0.68
PHGDH-228ENST00000641847 KCNA10Q16322 511 aa10.78□□□□□ -0.68
PHGDH-228ENST00000641847 RPUSD2Q8IZ73 545 aaKnown RBP10.78□□□□□ -0.68
PHGDH-228ENST00000641847 ZNF713Q8N859 430 aaPredicted RBP10.78□□□□□ -0.68
PHGDH-228ENST00000641847 SLC38A10Q9HBR0 1119 aa10.78□□□□□ -0.68
PHGDH-228ENST00000641847 CIZ1Q9ULV3 898 aaPredicted RBP10.78□□□□□ -0.68
PHGDH-228ENST00000641847 CTDP1Q9Y5B0 961 aaPredicted RBP10.78□□□□□ -0.68
PHGDH-228ENST00000641847 PCDHA11Q9Y5I1 949 aa10.78□□□□□ -0.68
PHGDH-228ENST00000641847 FAM86C2PA6NEL3 165 aa10.77□□□□□ -0.69
PHGDH-228ENST00000641847 PRR33A8MZF0 331 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms