RNA–Protein interactions for RNA: ENST00000641715.1

SAMMSON-221, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-221ENST00000641715 SOX1O00570 391 aaPredicted RBP13.6□□□□□ -0.23
SAMMSON-221ENST00000641715 KIAA0355O15063 1070 aa13.6□□□□□ -0.23
SAMMSON-221ENST00000641715 RGS20O76081 388 aa13.6□□□□□ -0.23
SAMMSON-221ENST00000641715 MYCLP12524 364 aaPredicted RBP13.6□□□□□ -0.23
SAMMSON-221ENST00000641715 CPT1AP50416 773 aa13.6□□□□□ -0.23
SAMMSON-221ENST00000641715 PSMC6P62333 389 aa13.6□□□□□ -0.23
SAMMSON-221ENST00000641715 PURAQ00577 322 aaKnown RBP13.6□□□□□ -0.23
SAMMSON-221ENST00000641715 ITGA7Q13683 1181 aa13.6□□□□□ -0.23
SAMMSON-221ENST00000641715 VSIG10LQ86VR7 867 aa13.6□□□□□ -0.23
SAMMSON-221ENST00000641715 FAM126BQ8IXS8 530 aa13.6□□□□□ -0.23
SAMMSON-221ENST00000641715 KLF18A0A0U1RQI7 1052 aa13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 MEIS2O14770 477 aa13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 ZBTB43O43298 467 aa13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 USP17L6PQ6QN14 398 aa13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 Q6ZUG5 572 aa13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 ZFP91Q96JP5 570 aaPredicted RBP13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 USP26Q9BXU7 913 aa13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 FAM217BQ9NTX9 383 aaPredicted RBP13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 POLR3EQ9NVU0 708 aa13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 DDX41Q9UJV9 622 aaKnown RBP13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 TBX21Q9UL17 535 aa13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 MYH7BA7E2Y1 1941 aa13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 EPB41L2O43491 1005 aaKnown RBP13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 CD4P01730 458 aa13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 MYL3P08590 195 aa13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 RAG1P15918 1043 aa13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 CDC27P30260 824 aa13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 FGD1P98174 961 aa13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 ARHGAP1Q07960 439 aa13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 APOBRQ0VD83 1088 aa13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 FUT2Q10981 343 aa13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 RTN1Q16799 776 aa13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 BRDTQ58F21 947 aaPredicted RBP13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 BLOC1S2Q6QNY1 142 aa13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 RBM28Q9NW13 759 aaKnown RBP13.59□□□□□ -0.23
SAMMSON-221ENST00000641715 FRMPD4Q14CM0 1322 aa13.58□□□□□ -0.24
SAMMSON-221ENST00000641715 CNTNAP5Q8WYK1 1306 aa13.58□□□□□ -0.24
SAMMSON-221ENST00000641715 SCN10AQ9Y5Y9 1956 aa13.58□□□□□ -0.24
SAMMSON-221ENST00000641715 GOLGA8AA7E2F4 631 aa13.58□□□□□ -0.24
SAMMSON-221ENST00000641715 GOLGA8BA8MQT2 603 aa13.58□□□□□ -0.24
SAMMSON-221ENST00000641715 PIK3CDO00329 1044 aa13.58□□□□□ -0.24
SAMMSON-221ENST00000641715 GH1P01241 217 aa13.58□□□□□ -0.24
SAMMSON-221ENST00000641715 CASTP20810 708 aaKnown RBP13.58□□□□□ -0.24
SAMMSON-221ENST00000641715 RPS6KB1P23443 525 aa13.58□□□□□ -0.24
SAMMSON-221ENST00000641715 CCND2P30279 289 aa13.58□□□□□ -0.24
SAMMSON-221ENST00000641715 SMARCC2Q8TAQ2 1214 aa13.58□□□□□ -0.24
SAMMSON-221ENST00000641715 AFG1LQ8WV93 481 aa13.58□□□□□ -0.24
SAMMSON-221ENST00000641715 GPKOWQ92917 476 aaPredicted RBP eCLIP13.58□□□□□ -0.24
SAMMSON-221ENST00000641715 BRF1Q92994 677 aa13.58□□□□□ -0.24
SAMMSON-221ENST00000641715 LRCH3Q96II8 777 aa13.58□□□□□ -0.24
SAMMSON-221ENST00000641715 NAP1L2Q9ULW6 460 aaPredicted RBP13.58□□□□□ -0.24
SAMMSON-221ENST00000641715 MRVI1Q9Y6F6 885 aa13.58□□□□□ -0.24
SAMMSON-221ENST00000641715 TLR3O15455 904 aaKnown RBP13.57□□□□□ -0.24
SAMMSON-221ENST00000641715 TIMP1P01033 207 aa13.57□□□□□ -0.24
SAMMSON-221ENST00000641715 PSMA5P28066 241 aa13.57□□□□□ -0.24
SAMMSON-221ENST00000641715 ADD1P35611 737 aaKnown RBP13.57□□□□□ -0.24
SAMMSON-221ENST00000641715 RCAN1P53805 252 aa13.57□□□□□ -0.24
SAMMSON-221ENST00000641715 MRPS9P82933 396 aaKnown RBP13.57□□□□□ -0.24
SAMMSON-221ENST00000641715 SP2Q02086 613 aa13.57□□□□□ -0.24
SAMMSON-221ENST00000641715 LRIT3Q3SXY7 679 aa13.57□□□□□ -0.24
SAMMSON-221ENST00000641715 FBXL16Q8N461 479 aa13.57□□□□□ -0.24
SAMMSON-221ENST00000641715 CUL5Q93034 780 aa13.57□□□□□ -0.24
SAMMSON-221ENST00000641715 MTG1Q9BT17 334 aaPredicted RBP13.57□□□□□ -0.24
SAMMSON-221ENST00000641715 SEZ6LQ9BYH1 1024 aa13.57□□□□□ -0.24
SAMMSON-221ENST00000641715 AGXT2Q9BYV1 514 aa13.57□□□□□ -0.24
SAMMSON-221ENST00000641715 TRPV6Q9H1D0 765 aa13.57□□□□□ -0.24
SAMMSON-221ENST00000641715 PSTPIP2Q9H939 334 aa13.57□□□□□ -0.24
SAMMSON-221ENST00000641715 B4GALT4O60513 344 aa13.56□□□□□ -0.24
SAMMSON-221ENST00000641715 MMP3P08254 477 aa13.56□□□□□ -0.24
SAMMSON-221ENST00000641715 EPHB4P54760 987 aa13.56□□□□□ -0.24
SAMMSON-221ENST00000641715 SHHQ15465 462 aa13.56□□□□□ -0.24
SAMMSON-221ENST00000641715 NBPF20Q3BBV1 942 aa13.56□□□□□ -0.24
SAMMSON-221ENST00000641715 C9orf50Q5SZB4 431 aa13.56□□□□□ -0.24
SAMMSON-221ENST00000641715 WWC2Q6AWC2 1192 aa13.56□□□□□ -0.24
SAMMSON-221ENST00000641715 HEATR3Q7Z4Q2 680 aa13.56□□□□□ -0.24
SAMMSON-221ENST00000641715 PPP1R13LQ8WUF5 828 aa13.56□□□□□ -0.24
SAMMSON-221ENST00000641715 EMID1Q96A84 441 aaPredicted RBP13.56□□□□□ -0.24
SAMMSON-221ENST00000641715 ALDH8A1Q9H2A2 487 aaPredicted RBP13.56□□□□□ -0.24
SAMMSON-221ENST00000641715 V9GY48 417 aaPredicted RBP13.56□□□□□ -0.24
SAMMSON-221ENST00000641715 SORBS3O60504 671 aa13.55□□□□□ -0.24
SAMMSON-221ENST00000641715 KPNA6O60684 536 aa13.55□□□□□ -0.24
SAMMSON-221ENST00000641715 TGFB3P10600 412 aa13.55□□□□□ -0.24
SAMMSON-221ENST00000641715 METAP2P50579 478 aaKnown RBP eCLIP13.55□□□□□ -0.24
SAMMSON-221ENST00000641715 FPGSQ05932 587 aa13.55□□□□□ -0.24
SAMMSON-221ENST00000641715 LAMC2Q13753 1193 aa13.55□□□□□ -0.24
SAMMSON-221ENST00000641715 MYSM1Q5VVJ2 828 aa13.55□□□□□ -0.24
SAMMSON-221ENST00000641715 MFSD5Q6N075 450 aa13.55□□□□□ -0.24
SAMMSON-221ENST00000641715 TYW1BQ6NUM6 668 aa13.55□□□□□ -0.24
SAMMSON-221ENST00000641715 KCNV1Q6PIU1 500 aa13.55□□□□□ -0.24
SAMMSON-221ENST00000641715 RUFY3Q7L099 469 aa13.55□□□□□ -0.24
SAMMSON-221ENST00000641715 DHX37Q8IY37 1157 aaKnown RBP13.55□□□□□ -0.24
SAMMSON-221ENST00000641715 INPP4AQ96PE3 977 aaPredicted RBP13.55□□□□□ -0.24
SAMMSON-221ENST00000641715 PPP1R12CQ9BZL4 782 aa13.55□□□□□ -0.24
SAMMSON-221ENST00000641715 ZSWIM6Q9HCJ5 1215 aa13.55□□□□□ -0.24
SAMMSON-221ENST00000641715 RTEL1Q9NZ71 1219 aa13.55□□□□□ -0.24
SAMMSON-221ENST00000641715 UBA1P22314 1058 aaKnown RBP13.54□□□□□ -0.24
SAMMSON-221ENST00000641715 UBE2SQ16763 222 aa13.54□□□□□ -0.24
SAMMSON-221ENST00000641715 CELF3Q5SZQ8 465 aaKnown RBP13.54□□□□□ -0.24
SAMMSON-221ENST00000641715 PCNX4Q63HM2 1172 aa13.54□□□□□ -0.24
SAMMSON-221ENST00000641715 PPTC7Q8NI37 304 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms